RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 RPS6KB1P23443 525 aa4.35□□□□□ -1.71
CD46-216ENST00000490278 CERS1P27544 350 aa4.35□□□□□ -1.71
CD46-216ENST00000490278 HOXA7P31268 230 aaPredicted RBP4.35□□□□□ -1.71
CD46-216ENST00000490278 ADPRHP54922 357 aa4.35□□□□□ -1.71
CD46-216ENST00000490278 YPEL5P62699 121 aa4.35□□□□□ -1.71
CD46-216ENST00000490278 HSF1Q00613 529 aa4.35□□□□□ -1.71
CD46-216ENST00000490278 TLE2Q04725 743 aa4.35□□□□□ -1.71
CD46-216ENST00000490278 CHRNDQ07001 517 aa4.35□□□□□ -1.71
CD46-216ENST00000490278 CBWD5Q5RIA9 395 aa4.35□□□□□ -1.71
CD46-216ENST00000490278 MEX3CQ5U5Q3 659 aaKnown RBP4.35□□□□□ -1.71
CD46-216ENST00000490278 ANO7Q6IWH7 933 aa4.35□□□□□ -1.71
CD46-216ENST00000490278 MIS18BP1Q6P0N0 1132 aa4.35□□□□□ -1.71
CD46-216ENST00000490278 GALNT16Q8N428 558 aa4.35□□□□□ -1.71
CD46-216ENST00000490278 EXD3Q8N9H8 876 aa4.35□□□□□ -1.71
CD46-216ENST00000490278 FAM47BQ8NA70 645 aa4.35□□□□□ -1.71
CD46-216ENST00000490278 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.35□□□□□ -1.71
CD46-216ENST00000490278 ZFPM2Q8WW38 1151 aa4.35□□□□□ -1.71
CD46-216ENST00000490278 KCNJ9Q92806 393 aa4.35□□□□□ -1.71
CD46-216ENST00000490278 MAELQ96JY0 434 aaKnown RBP4.35□□□□□ -1.71
CD46-216ENST00000490278 PPP1R10Q96QC0 940 aaKnown RBP4.35□□□□□ -1.71
CD46-216ENST00000490278 REEP2Q9BRK0 252 aa4.35□□□□□ -1.71
CD46-216ENST00000490278 HDHD5Q9BXW7 423 aa4.35□□□□□ -1.71
CD46-216ENST00000490278 TRIM31Q9BZY9 425 aa4.35□□□□□ -1.71
CD46-216ENST00000490278 SEMA4CQ9C0C4 833 aa4.35□□□□□ -1.71
CD46-216ENST00000490278 MLXIPLQ9NP71 852 aa4.35□□□□□ -1.71
CD46-216ENST00000490278 SLC22A11Q9NSA0 550 aa4.35□□□□□ -1.71
CD46-216ENST00000490278 GGA3Q9NZ52 723 aa4.35□□□□□ -1.71
CD46-216ENST00000490278 FLRT1Q9NZU1 646 aa4.35□□□□□ -1.71
CD46-216ENST00000490278 SLC25A13Q9UJS0 675 aa4.35□□□□□ -1.71
CD46-216ENST00000490278 SLC22A23A1A5C7 686 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 VWA3AA6NCI4 1184 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 NPIPB13A6NJU9 1138 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 NPIPB5A8MRT5 1133 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 NPIPB4C9JG80 1138 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 MCIDASD6RGH6 385 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 CD63P08962 238 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 LYL1P12980 280 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 CPA1P15085 419 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 HOXB9P17482 250 aaPredicted RBP4.34□□□□□ -1.71
CD46-216ENST00000490278 TFEBP19484 476 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 PAX3P23760 479 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 MPGP29372 298 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 CCR5P51681 352 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 OAZ1P54368 228 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 SLC12A2P55011 1212 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 POU5F1BQ06416 359 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 TRPC3Q13507 836 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 RUNDC3AQ59EK9 446 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 CEP78Q5JTW2 689 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 LIPMQ5VYY2 423 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 DENND1BQ6P3S1 775 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 LVRNQ6Q4G3 990 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 MMS22LQ6ZRQ5 1243 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 BBS12Q6ZW61 710 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 MDGA2Q7Z553 956 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 TMEM200AQ86VY9 491 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 SCN4BQ8IWT1 228 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 DNAJC10Q8IXB1 793 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 PAQR4Q8N4S7 273 aaPredicted RBP4.34□□□□□ -1.71
CD46-216ENST00000490278 OR52N4Q8NGI2 321 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 BCAS4Q8TDM0 211 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 EVI5LQ96CN4 794 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 ADAD1Q96M93 576 aaKnown RBP4.34□□□□□ -1.71
CD46-216ENST00000490278 FAM118BQ9BPY3 351 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 TXNRD2Q9NNW7 524 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 PDGFCQ9NRA1 345 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.34□□□□□ -1.71
CD46-216ENST00000490278 THAP1Q9NVV9 213 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 TMEM160Q9NX00 188 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 PTGFRNQ9P2B2 879 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 IPO11Q9UI26 975 aaKnown RBP4.34□□□□□ -1.71
CD46-216ENST00000490278 PKP3Q9Y446 797 aa4.34□□□□□ -1.71
CD46-216ENST00000490278 PPP6CO00743 305 aa4.33□□□□□ -1.72
CD46-216ENST00000490278 HOXC11O43248 304 aaPredicted RBP4.33□□□□□ -1.72
CD46-216ENST00000490278 ANP32CO43423 234 aa4.33□□□□□ -1.72
CD46-216ENST00000490278 AGR2O95994 175 aa4.33□□□□□ -1.72
CD46-216ENST00000490278 CYP4B1P13584 511 aa4.33□□□□□ -1.72
CD46-216ENST00000490278 PKMP14618 531 aaKnown RBP4.33□□□□□ -1.72
CD46-216ENST00000490278 GSTM2P28161 218 aa4.33□□□□□ -1.72
CD46-216ENST00000490278 CD38P28907 300 aa4.33□□□□□ -1.72
CD46-216ENST00000490278 RPS6KA3P51812 740 aa4.33□□□□□ -1.72
CD46-216ENST00000490278 VAMP2P63027 116 aa4.33□□□□□ -1.72
CD46-216ENST00000490278 GOLGA8FQ08AF8 430 aa4.33□□□□□ -1.72
CD46-216ENST00000490278 DLGAP5Q15398 846 aa4.33□□□□□ -1.72
CD46-216ENST00000490278 GXYLT1Q4G148 440 aa4.33□□□□□ -1.72
CD46-216ENST00000490278 ATG16L1Q676U5 607 aa4.33□□□□□ -1.72
CD46-216ENST00000490278 MTFR2Q6P444 385 aa4.33□□□□□ -1.72
CD46-216ENST00000490278 RTL10Q7L3V2 364 aa4.33□□□□□ -1.72
CD46-216ENST00000490278 VPS52Q8N1B4 723 aa4.33□□□□□ -1.72
CD46-216ENST00000490278 IL17REQ8NFR9 667 aa4.33□□□□□ -1.72
CD46-216ENST00000490278 STAMQ92783 540 aa4.33□□□□□ -1.72
CD46-216ENST00000490278 MASTLQ96GX5 879 aa4.33□□□□□ -1.72
CD46-216ENST00000490278 CRAMP1Q96RY5 1269 aa4.33□□□□□ -1.72
CD46-216ENST00000490278 EIF2AK1Q9BQI3 630 aaKnown RBP4.33□□□□□ -1.72
CD46-216ENST00000490278 KLHL13Q9P2N7 655 aa4.33□□□□□ -1.72
CD46-216ENST00000490278 KLQ9UEF7 1012 aa4.33□□□□□ -1.72
CD46-216ENST00000490278 SLC13A4Q9UKG4 626 aa4.33□□□□□ -1.72
CD46-216ENST00000490278 SUFUQ9UMX1 484 aa4.33□□□□□ -1.72
CD46-216ENST00000490278 SLC8A2Q9UPR5 921 aa4.33□□□□□ -1.72
CD46-216ENST00000490278 TNFSF13BQ9Y275 285 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms