RNA–Protein interactions for RNA: ENST00000490108.1

TSC2-215, Transcript of TSC complex subunit 2, humanhuman

TSL 4

Gene TSC2, Length 482 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-215ENST00000490108 KDF1Q8NAX2 398 aaPredicted RBP20.67■□□□□ 0.9
TSC2-215ENST00000490108 C1orf131Q8NDD1 294 aaKnown RBP20.67■□□□□ 0.9
TSC2-215ENST00000490108 ZCCHC14Q8WYQ9 949 aaKnown RBP20.67■□□□□ 0.9
TSC2-215ENST00000490108 SLC12A6Q9UHW9 1150 aa20.67■□□□□ 0.9
TSC2-215ENST00000490108 PCOLCE2Q9UKZ9 415 aa20.67■□□□□ 0.9
TSC2-215ENST00000490108 MSRB2Q9Y3D2 182 aa20.67■□□□□ 0.9
TSC2-215ENST00000490108 AKAP13Q12802 2813 aa20.67■□□□□ 0.9
TSC2-215ENST00000490108 NYNRINQ9P2P1 1898 aaKnown RBP20.67■□□□□ 0.9
TSC2-215ENST00000490108 EDDM13A0A1B0GTR0 161 aa20.66■□□□□ 0.9
TSC2-215ENST00000490108 A0A1W2PP55 124 aa20.66■□□□□ 0.9
TSC2-215ENST00000490108 GTPBP10A4D1E9 387 aaKnown RBP20.66■□□□□ 0.9
TSC2-215ENST00000490108 TMEM8BA6NDV4 472 aa20.66■□□□□ 0.9
TSC2-215ENST00000490108 KCNU1A8MYU2 1149 aa20.66■□□□□ 0.9
TSC2-215ENST00000490108 MID1O15344 667 aa20.66■□□□□ 0.9
TSC2-215ENST00000490108 HSF2BPO75031 334 aa20.66■□□□□ 0.9
TSC2-215ENST00000490108 PDGFRAP16234 1089 aa20.66■□□□□ 0.9
TSC2-215ENST00000490108 ABCB4P21439 1286 aa20.66■□□□□ 0.9
TSC2-215ENST00000490108 PSMD8P48556 350 aa20.66■□□□□ 0.9
TSC2-215ENST00000490108 CST6Q15828 149 aa20.66■□□□□ 0.9
TSC2-215ENST00000490108 KIF19Q2TAC6 998 aa20.66■□□□□ 0.9
TSC2-215ENST00000490108 C9orf64Q5T6V5 341 aa20.66■□□□□ 0.9
TSC2-215ENST00000490108 OR6B2Q6IFH4 312 aa20.66■□□□□ 0.9
TSC2-215ENST00000490108 FAM183BPQ6ZVS7 135 aa20.66■□□□□ 0.9
TSC2-215ENST00000490108 USP30Q70CQ3 517 aa20.66■□□□□ 0.9
TSC2-215ENST00000490108 MMAAQ8IVH4 418 aaKnown RBP20.66■□□□□ 0.9
TSC2-215ENST00000490108 WDTC1Q8N5D0 677 aa20.66■□□□□ 0.9
TSC2-215ENST00000490108 PNPLA1Q8N8W4 532 aa20.66■□□□□ 0.9
TSC2-215ENST00000490108 MLKLQ8NB16 471 aa20.66■□□□□ 0.9
TSC2-215ENST00000490108 RPL10LQ96L21 214 aaKnown RBP20.66■□□□□ 0.9
TSC2-215ENST00000490108 NOX5Q96PH1 765 aa20.66■□□□□ 0.9
TSC2-215ENST00000490108 SLC2A13Q96QE2 648 aa20.66■□□□□ 0.9
TSC2-215ENST00000490108 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.66■□□□□ 0.9
TSC2-215ENST00000490108 SERGEFQ9UGK8 458 aa20.66■□□□□ 0.9
TSC2-215ENST00000490108 SCML1Q9UN30 329 aa20.66■□□□□ 0.9
TSC2-215ENST00000490108 PCDHGC3Q9UN70 934 aa20.66■□□□□ 0.9
TSC2-215ENST00000490108 SNX11Q9Y5W9 270 aa20.66■□□□□ 0.9
TSC2-215ENST00000490108 ITIH6Q6UXX5 1313 aa20.65■□□□□ 0.9
TSC2-215ENST00000490108 RNASEH2AO75792 299 aaKnown RBP20.65■□□□□ 0.9
TSC2-215ENST00000490108 ZNF883P0CG24 379 aa20.65■□□□□ 0.9
TSC2-215ENST00000490108 PNMA6AP0CW24 399 aaPredicted RBP20.65■□□□□ 0.9
TSC2-215ENST00000490108 SLC2A3P11169 496 aa20.65■□□□□ 0.9
TSC2-215ENST00000490108 CD27P26842 260 aa20.65■□□□□ 0.9
TSC2-215ENST00000490108 GRIA4P48058 902 aa20.65■□□□□ 0.9
TSC2-215ENST00000490108 STK19P49842 368 aaPredicted RBP20.65■□□□□ 0.9
TSC2-215ENST00000490108 PTK2Q05397 1052 aa20.65■□□□□ 0.9
TSC2-215ENST00000490108 EFHC1Q5JVL4 640 aa20.65■□□□□ 0.9
TSC2-215ENST00000490108 RABGAP1LQ5R372 815 aa20.65■□□□□ 0.9
TSC2-215ENST00000490108 KIAA0895LQ68EN5 471 aa20.65■□□□□ 0.9
TSC2-215ENST00000490108 C11orf57Q6ZUT1 292 aaPredicted RBP20.65■□□□□ 0.9
TSC2-215ENST00000490108 RAB44Q7Z6P3 723 aaPredicted RBP20.65■□□□□ 0.9
TSC2-215ENST00000490108 ADAT2Q7Z6V5 191 aaKnown RBP20.65■□□□□ 0.9
TSC2-215ENST00000490108 CCAR2Q8N163 923 aaKnown RBP20.65■□□□□ 0.9
TSC2-215ENST00000490108 KDM1BQ8NB78 822 aa20.65■□□□□ 0.9
TSC2-215ENST00000490108 OMDQ99983 421 aa20.65■□□□□ 0.9
TSC2-215ENST00000490108 SYNCQ9H7C4 482 aa20.65■□□□□ 0.9
TSC2-215ENST00000490108 SIX2Q9NPC8 291 aa20.65■□□□□ 0.9
TSC2-215ENST00000490108 ASNSD1Q9NWL6 643 aa20.65■□□□□ 0.9
TSC2-215ENST00000490108 SLCO3A1Q9UIG8 710 aa20.65■□□□□ 0.9
TSC2-215ENST00000490108 DNAJC12Q9UKB3 198 aa20.65■□□□□ 0.9
TSC2-215ENST00000490108 ANKRD6Q9Y2G4 727 aa20.65■□□□□ 0.9
TSC2-215ENST00000490108 TMEM131Q92545 1883 aa20.64■□□□□ 0.9
TSC2-215ENST00000490108 TARSL2A2RTX5 802 aaKnown RBP20.64■□□□□ 0.89
TSC2-215ENST00000490108 CBFA2T3O75081 653 aa20.64■□□□□ 0.89
TSC2-215ENST00000490108 ERBB2P04626 1255 aa20.64■□□□□ 0.89
TSC2-215ENST00000490108 GLI1P08151 1106 aa20.64■□□□□ 0.89
TSC2-215ENST00000490108 CCR1P32246 355 aa20.64■□□□□ 0.89
TSC2-215ENST00000490108 KRT9P35527 623 aa20.64■□□□□ 0.89
TSC2-215ENST00000490108 CENPCQ03188 943 aa20.64■□□□□ 0.89
TSC2-215ENST00000490108 SFSWAPQ12872 951 aaKnown RBP20.64■□□□□ 0.89
TSC2-215ENST00000490108 NME3Q13232 169 aa20.64■□□□□ 0.89
TSC2-215ENST00000490108 ARID5BQ14865 1188 aa20.64■□□□□ 0.89
TSC2-215ENST00000490108 MAN2A1Q16706 1144 aa20.64■□□□□ 0.89
TSC2-215ENST00000490108 TTC39BQ5VTQ0 682 aaPredicted RBP20.64■□□□□ 0.89
TSC2-215ENST00000490108 NCEH1Q6PIU2 408 aa20.64■□□□□ 0.89
TSC2-215ENST00000490108 SLC47A2Q86VL8 602 aa20.64■□□□□ 0.89
TSC2-215ENST00000490108 STK40Q8N2I9 435 aa20.64■□□□□ 0.89
TSC2-215ENST00000490108 PRMT1Q99873 361 aaKnown RBP20.64■□□□□ 0.89
TSC2-215ENST00000490108 OSGEPQ9NPF4 335 aa20.64■□□□□ 0.89
TSC2-215ENST00000490108 PLCB1Q9NQ66 1216 aa20.64■□□□□ 0.89
TSC2-215ENST00000490108 APOBEC2Q9Y235 224 aaKnown RBP20.64■□□□□ 0.89
TSC2-215ENST00000490108 SPEGQ15772 3267 aa20.64■□□□□ 0.89
TSC2-215ENST00000490108 KNL1Q8NG31 2342 aa20.63■□□□□ 0.89
TSC2-215ENST00000490108 A0A1B0GVM2 712 aa20.63■□□□□ 0.89
TSC2-215ENST00000490108 TCAF2A6NFQ2 919 aa20.63■□□□□ 0.89
TSC2-215ENST00000490108 KCNK3O14649 394 aa20.63■□□□□ 0.89
TSC2-215ENST00000490108 DAB1O75553 588 aa20.63■□□□□ 0.89
TSC2-215ENST00000490108 IGHV4-34P06331 123 aa20.63■□□□□ 0.89
TSC2-215ENST00000490108 MZF1P28698 734 aaPredicted RBP20.63■□□□□ 0.89
TSC2-215ENST00000490108 SLC8A1P32418 973 aa20.63■□□□□ 0.89
TSC2-215ENST00000490108 GGCXP38435 758 aa20.63■□□□□ 0.89
TSC2-215ENST00000490108 EIF4EBP2Q13542 120 aaPredicted RBP20.63■□□□□ 0.89
TSC2-215ENST00000490108 PTPN20Q4JDL3 420 aa20.63■□□□□ 0.89
TSC2-215ENST00000490108 HSP90AA4PQ58FG1 418 aa20.63■□□□□ 0.89
TSC2-215ENST00000490108 FBXL22Q6P050 247 aa20.63■□□□□ 0.89
TSC2-215ENST00000490108 OLFML1Q6UWY5 402 aa20.63■□□□□ 0.89
TSC2-215ENST00000490108 FAM114A1Q8IWE2 563 aa20.63■□□□□ 0.89
TSC2-215ENST00000490108 SLC6A18Q96N87 628 aa20.63■□□□□ 0.89
TSC2-215ENST00000490108 RPRD1AQ96P16 312 aaPredicted RBP20.63■□□□□ 0.89
TSC2-215ENST00000490108 NEUROG2Q9H2A3 272 aa20.63■□□□□ 0.89
TSC2-215ENST00000490108 CLSTN2Q9H4D0 955 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms