RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 MAOBP27338 520 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 CCR1P32246 355 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 ACSL1P33121 698 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 NOS2P35228 1153 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 USP8P40818 1118 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 CXCR3P49682 368 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 NOVA1P51513 510 aaKnown RBP10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 SNX16P57768 344 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 BNC1Q01954 994 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 SLC6A3Q01959 620 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 ARID5AQ03989 594 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 KCNJ12Q14500 433 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 FNDC3BQ53EP0 1204 aaKnown RBP10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 PITRM1Q5JRX3 1037 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 MMS22LQ6ZRQ5 1243 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 FAM183BPQ6ZVS7 135 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 USP30Q70CQ3 517 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 ARCQ7LC44 396 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 BNIPLQ7Z465 357 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 CREBRFQ8IUR6 639 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 ZNF683Q8IZ20 524 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 LGI2Q8N0V4 545 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 MINDY1Q8N5J2 469 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 FAM131CQ96AQ9 280 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 PGAP3Q96FM1 320 aaPredicted RBP10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 NOX5Q96PH1 765 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 FAM129BQ96TA1 746 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 STK33Q9BYT3 514 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 FSCN3Q9NQT6 498 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 DDIT4Q9NX09 232 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 STIM2Q9P246 746 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 SLCO3A1Q9UIG8 710 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 ANGPTL2Q9UKU9 493 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 SCML1Q9UN30 329 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 ERVW-1Q9UQF0 538 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 OR51B4Q9Y5P0 310 aa10.05□□□□□ -0.8
TMEM39A-210ENST00000490099 DAB1O75553 588 aa10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 ZNF883P0CG24 379 aa10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 GNSP15586 552 aa10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 KRT9P35527 623 aa10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 MATKP42679 507 aa10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 CTSOP43234 321 aaPredicted RBP10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 MAPK8P45983 427 aa10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 ECT2LQ008S8 904 aa10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 CDH18Q13634 790 aa10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 AUHQ13825 339 aaKnown RBP10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 TPD52L1Q16890 204 aaPredicted RBP10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 PLEKHG6Q3KR16 790 aa10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 TTC39BQ5VTQ0 682 aaPredicted RBP10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 DCAF12L1Q5VU92 463 aa10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 RAP1GAP2Q684P5 730 aa10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 CXorf57Q6NSI4 855 aaKnown RBP10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 FBXL22Q6P050 247 aa10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 PASD1Q8IV76 773 aa10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 APCDD1Q8J025 514 aa10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 CCAR2Q8N163 923 aaKnown RBP10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 CARNMT1Q8N4J0 409 aa10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 ZNF366Q8N895 744 aa10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 ATP6V0D2Q8N8Y2 350 aa10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 TMEM35BQ8NCS4 154 aa10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 GPT2Q8TD30 523 aa10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 FRS2Q8WU20 508 aa10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 PTPRN2Q92932 1015 aa10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 IGSF8Q969P0 613 aa10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 PABPC3Q9H361 631 aaKnown RBP10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 MTG2Q9H4K7 406 aa10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 SGK2Q9HBY8 427 aa10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 ANLNQ9NQW6 1124 aa10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 ARHGEF38Q9NXL2 777 aa10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 RRN3Q9NYV6 651 aa10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 ADAMTS1Q9UHI8 967 aa10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 SLC12A6Q9UHW9 1150 aa10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 TMEM59LQ9UK28 342 aa10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 TBC1D30Q9Y2I9 924 aa10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 FHOD1Q9Y613 1164 aa10.04□□□□□ -0.8
TMEM39A-210ENST00000490099 USP24Q9UPU5 2620 aa10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 A0A1B0GVM2 712 aa10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 TYW5A2RUC4 315 aaKnown RBP10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 FAM221BA6H8Z2 402 aa10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 TCAF2A6NFQ2 919 aa10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 DRGXA6NNA5 263 aa10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 F5H5T6 163 aa10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 F8VZ95 297 aa10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 BCAT2O15382 392 aaPredicted RBP10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 OPHN1O60890 802 aa10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 CBFA2T3O75081 653 aa10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 SIN3BO75182 1162 aa10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 PAGE1O75459 146 aa10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 ENDOD1O94919 500 aa10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 LSM8O95777 96 aaKnown RBP10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 MOCS2O96007 188 aaPredicted RBP10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 ACADMP11310 421 aa10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 OXCT1P55809 520 aa10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 SULT2A1Q06520 285 aa10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 GRIK2Q13002 908 aa10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 HNRNPDQ14103 355 aaKnown RBP10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 UAP1L1Q3KQV9 507 aa10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 ZNF776Q68DI1 518 aaPredicted RBP10.03□□□□□ -0.8
TMEM39A-210ENST00000490099 OR6B2Q6IFH4 312 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms