RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 LRRC57Q8N9N7 239 aa10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 C12orf50Q8NA57 414 aaPredicted RBP10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 KIF18AQ8NI77 898 aa10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 DQX1Q8TE96 717 aaKnown RBP10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 TMA16Q96EY4 203 aaKnown RBP10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 P2RY11Q96G91 374 aa10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 SLC2A13Q96QE2 648 aa10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 ACOX2Q99424 681 aa10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 DDX50Q9BQ39 737 aaKnown RBP10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 RTKNQ9BST9 563 aa10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 NUP85Q9BW27 656 aa10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 POPDC2Q9HBU9 364 aa10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 LZTFL1Q9NQ48 299 aa10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 METTL5Q9NRN9 209 aaKnown RBP10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 VPS45Q9NRW7 570 aa10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 TLR6Q9Y2C9 796 aa10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 CAPN6Q9Y6Q1 641 aa10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 SPTBN4Q9H254 2564 aa10.93□□□□□ -0.66
SCAMP4-208ENST00000489554 BCLAF3A2AJT9 711 aaKnown RBP10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 GRID2IPA4D2P6 1211 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 C2CD4BA6NLJ0 364 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 GOLGA8SH3BPF8 625 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 MAP3K13O43283 966 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 BUB1O43683 1085 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 ACSL4O60488 711 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 TSPAN3O60637 253 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 ZNF217O75362 1048 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 MOCS3O95396 460 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 GABRG2P18507 467 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 HOXD9P28356 352 aaPredicted RBP10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 YWHAZP63104 245 aaKnown RBP10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 PITX1P78337 314 aaPredicted RBP10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 CREB5Q02930 508 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 KIF5AQ12840 1032 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 STARD3Q14849 445 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 GEN1Q17RS7 908 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 MAP7D1Q3KQU3 841 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 RAB6CQ53S08 254 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 SPDYCQ5MJ68 293 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 MPP7Q5T2T1 576 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 FAM102AQ5T9C2 384 aaPredicted RBP10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 DNAJC24Q6P3W2 148 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 NYAP1Q6ZVC0 841 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 LPCAT2Q7L5N7 544 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 ARCQ7LC44 396 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 BNIPLQ7Z465 357 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 RHOT2Q8IXI1 618 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 ARFGAP1Q8N6T3 406 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 EMC1Q8N766 993 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 MSANTD4Q8NCY6 345 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 TPCN2Q8NHX9 752 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 ZNF564Q8TBZ8 553 aaPredicted RBP10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 WFIKKN2Q8TEU8 576 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 BTBD6Q96KE9 485 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 MCEEQ96PE7 176 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 RAB6CQ9H0N0 254 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 GOLPH3Q9H4A6 298 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 CD248Q9HCU0 757 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 LUC7LQ9NQ29 371 aaKnown RBP10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 PARVAQ9NVD7 372 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 ASNSD1Q9NWL6 643 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 ELOVL2Q9NXB9 296 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 CACNA2D2Q9NY47 1150 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 CALCOCO1Q9P1Z2 691 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 UVRAGQ9P2Y5 699 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 THAP10Q9P2Z0 257 aaPredicted RBP10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 NAALADL1Q9UQQ1 740 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 INVSQ9Y283 1065 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 STON1Q9Y6Q2 735 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 CEP250Q9BV73 2442 aa10.92□□□□□ -0.66
SCAMP4-208ENST00000489554 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.91□□□□□ -0.66
SCAMP4-208ENST00000489554 MACROD2A1Z1Q3 448 aa10.91□□□□□ -0.66
SCAMP4-208ENST00000489554 TYW5A2RUC4 315 aaKnown RBP10.91□□□□□ -0.66
SCAMP4-208ENST00000489554 SLC30A4O14863 429 aa10.91□□□□□ -0.66
SCAMP4-208ENST00000489554 KRT86O43790 486 aa10.91□□□□□ -0.66
SCAMP4-208ENST00000489554 BUB1BO60566 1050 aaPredicted RBP10.91□□□□□ -0.66
SCAMP4-208ENST00000489554 DAB1O75553 588 aa10.91□□□□□ -0.66
SCAMP4-208ENST00000489554 GRAP2O75791 330 aa10.91□□□□□ -0.66
SCAMP4-208ENST00000489554 GLI1P08151 1106 aa10.91□□□□□ -0.66
SCAMP4-208ENST00000489554 KRT3P12035 628 aa10.91□□□□□ -0.66
SCAMP4-208ENST00000489554 TFE3P19532 575 aaPredicted RBP10.91□□□□□ -0.66
SCAMP4-208ENST00000489554 BCKDHBP21953 392 aa10.91□□□□□ -0.66
SCAMP4-208ENST00000489554 DPP6P42658 865 aa10.91□□□□□ -0.66
SCAMP4-208ENST00000489554 LIMK1P53667 647 aa10.91□□□□□ -0.66
SCAMP4-208ENST00000489554 ENPP2Q13822 863 aa10.91□□□□□ -0.66
SCAMP4-208ENST00000489554 AASDHQ4L235 1098 aaPredicted RBP10.91□□□□□ -0.66
SCAMP4-208ENST00000489554 FAM133BQ5BKY9 247 aaKnown RBP10.91□□□□□ -0.66
SCAMP4-208ENST00000489554 EFHC1Q5JVL4 640 aa10.91□□□□□ -0.66
SCAMP4-208ENST00000489554 PIK3R6Q5UE93 754 aa10.91□□□□□ -0.66
SCAMP4-208ENST00000489554 SYPL2Q5VXT5 272 aa10.91□□□□□ -0.66
SCAMP4-208ENST00000489554 RNF43Q68DV7 783 aa10.91□□□□□ -0.66
SCAMP4-208ENST00000489554 SLC36A4Q6YBV0 504 aa10.91□□□□□ -0.66
SCAMP4-208ENST00000489554 CYP2U1Q7Z449 544 aa10.91□□□□□ -0.66
SCAMP4-208ENST00000489554 SLFN11Q7Z7L1 901 aa10.91□□□□□ -0.66
SCAMP4-208ENST00000489554 TAC4Q86UU9 113 aa10.91□□□□□ -0.66
SCAMP4-208ENST00000489554 RNF10Q8N5U6 811 aaKnown RBP10.91□□□□□ -0.66
SCAMP4-208ENST00000489554 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.91□□□□□ -0.66
SCAMP4-208ENST00000489554 RLN3Q8WXF3 142 aa10.91□□□□□ -0.66
SCAMP4-208ENST00000489554 NT5C3BQ969T7 300 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms