RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 BRD3Q15059 726 aa21.46■■□□□ 1.03
SND1-214ENST00000489417 PRKD1Q15139 912 aaPredicted RBP21.46■■□□□ 1.03
SND1-214ENST00000489417 ALFQ53S48 1182 aa21.46■■□□□ 1.03
SND1-214ENST00000489417 RABGAP1LQ5R372 815 aa21.46■■□□□ 1.03
SND1-214ENST00000489417 PRUNE1Q86TP1 453 aa21.46■■□□□ 1.03
SND1-214ENST00000489417 TP53INP2Q8IXH6 220 aa21.46■■□□□ 1.03
SND1-214ENST00000489417 CCDC89Q8N998 374 aa21.46■■□□□ 1.03
SND1-214ENST00000489417 GLIS1Q8NBF1 620 aa21.46■■□□□ 1.03
SND1-214ENST00000489417 LRRN4Q8WUT4 740 aa21.46■■□□□ 1.03
SND1-214ENST00000489417 IFT81Q8WYA0 676 aa21.46■■□□□ 1.03
SND1-214ENST00000489417 ANKRD7Q92527 254 aa21.46■■□□□ 1.03
SND1-214ENST00000489417 CELF6Q96J87 481 aaKnown RBP21.46■■□□□ 1.03
SND1-214ENST00000489417 PRDM12Q9H4Q4 367 aa21.46■■□□□ 1.03
SND1-214ENST00000489417 USP29Q9HBJ7 922 aa21.46■■□□□ 1.03
SND1-214ENST00000489417 ZNF510Q9Y2H8 683 aa21.46■■□□□ 1.03
SND1-214ENST00000489417 NOTCH4Q99466 2003 aa21.46■■□□□ 1.03
SND1-214ENST00000489417 TMEM265A0A087WTH1 108 aa21.46■■□□□ 1.03
SND1-214ENST00000489417 KCNN4O15554 427 aa21.46■■□□□ 1.03
SND1-214ENST00000489417 ETS1P14921 441 aa21.46■■□□□ 1.03
SND1-214ENST00000489417 H2AFXP16104 143 aaPredicted RBP21.46■■□□□ 1.03
SND1-214ENST00000489417 RPL21P46778 160 aaKnown RBP21.46■■□□□ 1.03
SND1-214ENST00000489417 CARSP49589 748 aaKnown RBP21.46■■□□□ 1.03
SND1-214ENST00000489417 TRADDQ15628 312 aa21.46■■□□□ 1.03
SND1-214ENST00000489417 ANKRD54Q6NXT1 300 aa21.46■■□□□ 1.03
SND1-214ENST00000489417 HTR3DQ70Z44 454 aa21.46■■□□□ 1.03
SND1-214ENST00000489417 TFAP2DQ7Z6R9 452 aa21.46■■□□□ 1.03
SND1-214ENST00000489417 ARHGAP12Q8IWW6 846 aa21.46■■□□□ 1.03
SND1-214ENST00000489417 ITFG1Q8TB96 612 aa21.46■■□□□ 1.03
SND1-214ENST00000489417 ING5Q8WYH8 240 aa21.46■■□□□ 1.03
SND1-214ENST00000489417 RTP4Q96DX8 246 aa21.46■■□□□ 1.03
SND1-214ENST00000489417 PRICKLE1Q96MT3 831 aaPredicted RBP21.46■■□□□ 1.03
SND1-214ENST00000489417 BRD8Q9H0E9 1235 aa21.46■■□□□ 1.03
SND1-214ENST00000489417 SMG9Q9H0W8 520 aaKnown RBP21.46■■□□□ 1.03
SND1-214ENST00000489417 RETREG1Q9H6L5 497 aa21.46■■□□□ 1.03
SND1-214ENST00000489417 ARGLU1Q9NWB6 273 aaPredicted RBP21.46■■□□□ 1.03
SND1-214ENST00000489417 ZNF189O75820 626 aaPredicted RBP21.45■■□□□ 1.02
SND1-214ENST00000489417 ZSCAN5DPP0CG00 497 aa21.45■■□□□ 1.02
SND1-214ENST00000489417 VPS41P49754 854 aa21.45■■□□□ 1.02
SND1-214ENST00000489417 AFMIDQ63HM1 303 aa21.45■■□□□ 1.02
SND1-214ENST00000489417 GPR149Q86SP6 731 aa21.45■■□□□ 1.02
SND1-214ENST00000489417 CIR1Q86X95 450 aaPredicted RBP21.45■■□□□ 1.02
SND1-214ENST00000489417 EIF1ADQ8N9N8 165 aaKnown RBP21.45■■□□□ 1.02
SND1-214ENST00000489417 CCNYQ8ND76 341 aa21.45■■□□□ 1.02
SND1-214ENST00000489417 TTC16Q8NEE8 873 aa21.45■■□□□ 1.02
SND1-214ENST00000489417 SH3RF2Q8TEC5 729 aa21.45■■□□□ 1.02
SND1-214ENST00000489417 HDAC11Q96DB2 347 aa21.45■■□□□ 1.02
SND1-214ENST00000489417 LGMNQ99538 433 aa21.45■■□□□ 1.02
SND1-214ENST00000489417 NDFIP2Q9NV92 336 aa21.45■■□□□ 1.02
SND1-214ENST00000489417 ZNF212Q9UDV6 495 aa21.45■■□□□ 1.02
SND1-214ENST00000489417 ZFP37Q9Y6Q3 630 aaPredicted RBP21.45■■□□□ 1.02
SND1-214ENST00000489417 HELZP42694 1942 aaKnown RBP21.44■■□□□ 1.02
SND1-214ENST00000489417 CCDC151A5D8V7 595 aa21.44■■□□□ 1.02
SND1-214ENST00000489417 TRDMT1O14717 391 aaKnown RBP21.44■■□□□ 1.02
SND1-214ENST00000489417 SCAMP3O14828 347 aaKnown RBP21.44■■□□□ 1.02
SND1-214ENST00000489417 MYBL2P10244 700 aa21.44■■□□□ 1.02
SND1-214ENST00000489417 VAV1P15498 845 aa21.44■■□□□ 1.02
SND1-214ENST00000489417 ADCY8P40145 1251 aa21.44■■□□□ 1.02
SND1-214ENST00000489417 GARSP41250 739 aaKnown RBP21.44■■□□□ 1.02
SND1-214ENST00000489417 MAPKAPK2P49137 400 aa21.44■■□□□ 1.02
SND1-214ENST00000489417 PPIDQ08752 370 aaKnown RBP21.44■■□□□ 1.02
SND1-214ENST00000489417 AP1B1Q10567 949 aa21.44■■□□□ 1.02
SND1-214ENST00000489417 ADAM15Q13444 863 aa21.44■■□□□ 1.02
SND1-214ENST00000489417 HEATR6Q6AI08 1181 aaKnown RBP21.44■■□□□ 1.02
SND1-214ENST00000489417 SYCE2Q6PIF2 218 aa21.44■■□□□ 1.02
SND1-214ENST00000489417 FBXO38Q6PIJ6 1188 aa21.44■■□□□ 1.02
SND1-214ENST00000489417 FAM217AQ8IXS0 508 aa21.44■■□□□ 1.02
SND1-214ENST00000489417 GSPT2Q8IYD1 628 aaKnown RBP21.44■■□□□ 1.02
SND1-214ENST00000489417 CFAP52Q8N1V2 620 aa21.44■■□□□ 1.02
SND1-214ENST00000489417 UMODL1-AS1Q8N2C9 162 aa21.44■■□□□ 1.02
SND1-214ENST00000489417 USP13Q92995 863 aaPredicted RBP21.44■■□□□ 1.02
SND1-214ENST00000489417 SNF8Q96H20 258 aa21.44■■□□□ 1.02
SND1-214ENST00000489417 APOL5Q9BWW9 433 aa21.44■■□□□ 1.02
SND1-214ENST00000489417 SLC39A8Q9C0K1 460 aa21.44■■□□□ 1.02
SND1-214ENST00000489417 TTYH1Q9H313 450 aaPredicted RBP21.44■■□□□ 1.02
SND1-214ENST00000489417 TDP1Q9NUW8 608 aa21.44■■□□□ 1.02
SND1-214ENST00000489417 GRHL1Q9NZI5 618 aa21.44■■□□□ 1.02
SND1-214ENST00000489417 COLQQ9Y215 455 aaPredicted RBP21.44■■□□□ 1.02
SND1-214ENST00000489417 TRANK1O15050 2925 aa21.43■■□□□ 1.02
SND1-214ENST00000489417 E2F8A0AVK6 867 aa21.43■■□□□ 1.02
SND1-214ENST00000489417 DFFAO00273 331 aa21.43■■□□□ 1.02
SND1-214ENST00000489417 TSPAN3O60637 253 aa21.43■■□□□ 1.02
SND1-214ENST00000489417 ERLIN1O75477 346 aa21.43■■□□□ 1.02
SND1-214ENST00000489417 FSHRP23945 695 aa21.43■■□□□ 1.02
SND1-214ENST00000489417 IVDP26440 423 aa21.43■■□□□ 1.02
SND1-214ENST00000489417 RPL22P35268 128 aaKnown RBP21.43■■□□□ 1.02
SND1-214ENST00000489417 NDST2P52849 883 aa21.43■■□□□ 1.02
SND1-214ENST00000489417 CDH4P55283 916 aa21.43■■□□□ 1.02
SND1-214ENST00000489417 HLTFQ14527 1009 aaKnown RBP eCLIP21.43■■□□□ 1.02
SND1-214ENST00000489417 TTC39BQ5VTQ0 682 aaPredicted RBP21.43■■□□□ 1.02
SND1-214ENST00000489417 HTR3CQ8WXA8 447 aa21.43■■□□□ 1.02
SND1-214ENST00000489417 ZSWIM3Q96MP5 696 aa21.43■■□□□ 1.02
SND1-214ENST00000489417 FERMT1Q9BQL6 677 aa21.43■■□□□ 1.02
SND1-214ENST00000489417 NOL6Q9H6R4 1146 aaKnown RBP21.43■■□□□ 1.02
SND1-214ENST00000489417 WHRNQ9P202 907 aa21.43■■□□□ 1.02
SND1-214ENST00000489417 NFU1Q9UMS0 254 aa21.43■■□□□ 1.02
SND1-214ENST00000489417 CCL26Q9Y258 94 aa21.43■■□□□ 1.02
SND1-214ENST00000489417 GFRA2O00451 464 aa21.42■■□□□ 1.02
SND1-214ENST00000489417 PRAMEF12O95522 483 aa21.42■■□□□ 1.02
SND1-214ENST00000489417 HOXB8P17481 243 aaPredicted RBP21.42■■□□□ 1.02
SND1-214ENST00000489417 SGSHP51688 502 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms