RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 ATP5OP48047 213 aa13.19□□□□□ -0.3
TOP3A-206ENST00000489131 NRIP1P48552 1158 aa13.19□□□□□ -0.3
TOP3A-206ENST00000489131 CYP4F8P98187 520 aa13.19□□□□□ -0.3
TOP3A-206ENST00000489131 SLC5A9Q2M3M2 681 aa13.19□□□□□ -0.3
TOP3A-206ENST00000489131 ARHGAP15Q53QZ3 475 aa13.19□□□□□ -0.3
TOP3A-206ENST00000489131 BEND6Q5SZJ8 279 aaPredicted RBP13.19□□□□□ -0.3
TOP3A-206ENST00000489131 PRPF38BQ5VTL8 546 aaKnown RBP13.19□□□□□ -0.3
TOP3A-206ENST00000489131 RAP1GAP2Q684P5 730 aa13.19□□□□□ -0.3
TOP3A-206ENST00000489131 DARS2Q6PI48 645 aaKnown RBP13.19□□□□□ -0.3
TOP3A-206ENST00000489131 ZDHHC24Q6UX98 284 aa13.19□□□□□ -0.3
TOP3A-206ENST00000489131 GSTA5Q7RTV2 222 aa13.19□□□□□ -0.3
TOP3A-206ENST00000489131 ZC3H18Q86VM9 953 aaKnown RBP13.19□□□□□ -0.3
TOP3A-206ENST00000489131 CMTM8Q8IZV2 173 aa13.19□□□□□ -0.3
TOP3A-206ENST00000489131 EFHBQ8N7U6 833 aa13.19□□□□□ -0.3
TOP3A-206ENST00000489131 GLIS1Q8NBF1 620 aa13.19□□□□□ -0.3
TOP3A-206ENST00000489131 RSAD2Q8WXG1 361 aa13.19□□□□□ -0.3
TOP3A-206ENST00000489131 IGSF8Q969P0 613 aa13.19□□□□□ -0.3
TOP3A-206ENST00000489131 PHACTR1Q9C0D0 580 aa13.19□□□□□ -0.3
TOP3A-206ENST00000489131 ADAM7Q9H2U9 754 aa13.19□□□□□ -0.3
TOP3A-206ENST00000489131 PRDM12Q9H4Q4 367 aa13.19□□□□□ -0.3
TOP3A-206ENST00000489131 GKN1Q9NS71 199 aa13.19□□□□□ -0.3
TOP3A-206ENST00000489131 VANGL2Q9ULK5 521 aa13.19□□□□□ -0.3
TOP3A-206ENST00000489131 CPQQ9Y646 472 aa13.19□□□□□ -0.3
TOP3A-206ENST00000489131 NUP210Q8TEM1 1887 aaPredicted RBP13.19□□□□□ -0.3
TOP3A-206ENST00000489131 E2F8A0AVK6 867 aa13.18□□□□□ -0.3
TOP3A-206ENST00000489131 DNALI1O14645 258 aaPredicted RBP13.18□□□□□ -0.3
TOP3A-206ENST00000489131 HMBSP08397 361 aa13.18□□□□□ -0.3
TOP3A-206ENST00000489131 RBL1P28749 1068 aa13.18□□□□□ -0.3
TOP3A-206ENST00000489131 GGCXP38435 758 aa13.18□□□□□ -0.3
TOP3A-206ENST00000489131 CDH4P55283 916 aa13.18□□□□□ -0.3
TOP3A-206ENST00000489131 YBEYP58557 167 aaPredicted RBP13.18□□□□□ -0.3
TOP3A-206ENST00000489131 TNK2Q07912 1038 aa13.18□□□□□ -0.3
TOP3A-206ENST00000489131 COL19A1Q14993 1142 aa13.18□□□□□ -0.3
TOP3A-206ENST00000489131 TRADDQ15628 312 aa13.18□□□□□ -0.3
TOP3A-206ENST00000489131 RABGAP1LQ5R372 815 aa13.18□□□□□ -0.3
TOP3A-206ENST00000489131 MPP7Q5T2T1 576 aa13.18□□□□□ -0.3
TOP3A-206ENST00000489131 HIBCHQ6NVY1 386 aaPredicted RBP13.18□□□□□ -0.3
TOP3A-206ENST00000489131 RWDD4Q6NW29 188 aaKnown RBP13.18□□□□□ -0.3
TOP3A-206ENST00000489131 PCGF5Q86SE9 256 aa13.18□□□□□ -0.3
TOP3A-206ENST00000489131 HOOK3Q86VS8 718 aa13.18□□□□□ -0.3
TOP3A-206ENST00000489131 CHSY1Q86X52 802 aa13.18□□□□□ -0.3
TOP3A-206ENST00000489131 DENND1CQ8IV53 801 aa13.18□□□□□ -0.3
TOP3A-206ENST00000489131 MREGQ8N565 214 aa13.18□□□□□ -0.3
TOP3A-206ENST00000489131 MAB21L3Q8N8X9 362 aa13.18□□□□□ -0.3
TOP3A-206ENST00000489131 FAM71DQ8N9W8 422 aa13.18□□□□□ -0.3
TOP3A-206ENST00000489131 ZSCAN18Q8TBC5 510 aaPredicted RBP13.18□□□□□ -0.3
TOP3A-206ENST00000489131 HTR3CQ8WXA8 447 aa13.18□□□□□ -0.3
TOP3A-206ENST00000489131 WBP2Q969T9 261 aa13.18□□□□□ -0.3
TOP3A-206ENST00000489131 LRRC45Q96CN5 670 aa13.18□□□□□ -0.3
TOP3A-206ENST00000489131 PRICKLE1Q96MT3 831 aaPredicted RBP13.18□□□□□ -0.3
TOP3A-206ENST00000489131 CYP2S1Q96SQ9 504 aa13.18□□□□□ -0.3
TOP3A-206ENST00000489131 VAT1Q99536 393 aa13.18□□□□□ -0.3
TOP3A-206ENST00000489131 FERMT1Q9BQL6 677 aa13.18□□□□□ -0.3
TOP3A-206ENST00000489131 FOXP3Q9BZS1 431 aa13.18□□□□□ -0.3
TOP3A-206ENST00000489131 NOL6Q9H6R4 1146 aaKnown RBP13.18□□□□□ -0.3
TOP3A-206ENST00000489131 TRPC7Q9HCX4 862 aa13.18□□□□□ -0.3
TOP3A-206ENST00000489131 ARFGAP3Q9NP61 516 aa13.18□□□□□ -0.3
TOP3A-206ENST00000489131 PAK5Q9P286 719 aa13.18□□□□□ -0.3
TOP3A-206ENST00000489131 ASIC3Q9UHC3 531 aa13.18□□□□□ -0.3
TOP3A-206ENST00000489131 NFU1Q9UMS0 254 aa13.18□□□□□ -0.3
TOP3A-206ENST00000489131 SHOC2Q9UQ13 582 aa13.18□□□□□ -0.3
TOP3A-206ENST00000489131 SNX24Q9Y343 169 aa13.18□□□□□ -0.3
TOP3A-206ENST00000489131 FARP1Q9Y4F1 1045 aaPredicted RBP13.18□□□□□ -0.3
TOP3A-206ENST00000489131 KCNN4O15554 427 aa13.17□□□□□ -0.3
TOP3A-206ENST00000489131 OPHN1O60890 802 aa13.17□□□□□ -0.3
TOP3A-206ENST00000489131 CLDN11O75508 207 aa13.17□□□□□ -0.3
TOP3A-206ENST00000489131 CSPG5O95196 566 aa13.17□□□□□ -0.3
TOP3A-206ENST00000489131 GLP2RO95838 553 aa13.17□□□□□ -0.3
TOP3A-206ENST00000489131 CKMP06732 381 aa13.17□□□□□ -0.3
TOP3A-206ENST00000489131 VAV1P15498 845 aa13.17□□□□□ -0.3
TOP3A-206ENST00000489131 HOXB8P17481 243 aaPredicted RBP13.17□□□□□ -0.3
TOP3A-206ENST00000489131 CCNCP24863 283 aa13.17□□□□□ -0.3
TOP3A-206ENST00000489131 RPL22P35268 128 aaKnown RBP13.17□□□□□ -0.3
TOP3A-206ENST00000489131 IRAK1P51617 712 aa13.17□□□□□ -0.3
TOP3A-206ENST00000489131 HYAL1Q12794 435 aa13.17□□□□□ -0.3
TOP3A-206ENST00000489131 MORF4L2Q15014 288 aa13.17□□□□□ -0.3
TOP3A-206ENST00000489131 TEAD2Q15562 447 aa13.17□□□□□ -0.3
TOP3A-206ENST00000489131 PARP15Q460N3 678 aa13.17□□□□□ -0.3
TOP3A-206ENST00000489131 ALFQ53S48 1182 aa13.17□□□□□ -0.3
TOP3A-206ENST00000489131 SPDYCQ5MJ68 293 aa13.17□□□□□ -0.3
TOP3A-206ENST00000489131 STXBP5Q5T5C0 1151 aa13.17□□□□□ -0.3
TOP3A-206ENST00000489131 GPR158Q5T848 1215 aa13.17□□□□□ -0.3
TOP3A-206ENST00000489131 HEATR6Q6AI08 1181 aaKnown RBP13.17□□□□□ -0.3
TOP3A-206ENST00000489131 ZNF783Q6ZMS7 281 aa13.17□□□□□ -0.3
TOP3A-206ENST00000489131 GRASPQ7Z6J2 395 aaPredicted RBP13.17□□□□□ -0.3
TOP3A-206ENST00000489131 GPR149Q86SP6 731 aa13.17□□□□□ -0.3
TOP3A-206ENST00000489131 RBM23Q86U06 439 aaKnown RBP13.17□□□□□ -0.3
TOP3A-206ENST00000489131 KLHDC8BQ8IXV7 354 aa13.17□□□□□ -0.3
TOP3A-206ENST00000489131 SMG7Q92540 1137 aaKnown RBP13.17□□□□□ -0.3
TOP3A-206ENST00000489131 TCEAL4Q96EI5 215 aa13.17□□□□□ -0.3
TOP3A-206ENST00000489131 RPRD1AQ96P16 312 aaPredicted RBP13.17□□□□□ -0.3
TOP3A-206ENST00000489131 LGMNQ99538 433 aa13.17□□□□□ -0.3
TOP3A-206ENST00000489131 TXLNGYQ9BZA5 131 aa13.17□□□□□ -0.3
TOP3A-206ENST00000489131 TSPYL1Q9H0U9 437 aa13.17□□□□□ -0.3
TOP3A-206ENST00000489131 NEUROG2Q9H2A3 272 aa13.17□□□□□ -0.3
TOP3A-206ENST00000489131 DPH5Q9H2P9 285 aa13.17□□□□□ -0.3
TOP3A-206ENST00000489131 ZNF576Q9H609 170 aa13.17□□□□□ -0.3
TOP3A-206ENST00000489131 LSM7Q9UK45 103 aaKnown RBP13.17□□□□□ -0.3
TOP3A-206ENST00000489131 TBC1D30Q9Y2I9 924 aa13.17□□□□□ -0.3
TOP3A-206ENST00000489131 A0A0A0MRY4 1105 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms