RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 PDXKO00764 312 aa16.78■□□□□ 0.28
USP48-210ENST00000489108 SLC28A2O43868 658 aa16.78■□□□□ 0.28
USP48-210ENST00000489108 KLRC4O43908 158 aa16.78■□□□□ 0.28
USP48-210ENST00000489108 SLC8A3P57103 927 aa16.78■□□□□ 0.28
USP48-210ENST00000489108 DAB2P98082 770 aa16.78■□□□□ 0.28
USP48-210ENST00000489108 VAC14Q08AM6 782 aa16.78■□□□□ 0.28
USP48-210ENST00000489108 FAM133BQ5BKY9 247 aaKnown RBP16.78■□□□□ 0.28
USP48-210ENST00000489108 CDCP2Q5VXM1 449 aa16.78■□□□□ 0.28
USP48-210ENST00000489108 ARHGAP17Q68EM7 881 aa16.78■□□□□ 0.28
USP48-210ENST00000489108 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.78■□□□□ 0.28
USP48-210ENST00000489108 MMS22LQ6ZRQ5 1243 aa16.78■□□□□ 0.28
USP48-210ENST00000489108 LSMEM2Q8N112 164 aa16.78■□□□□ 0.28
USP48-210ENST00000489108 KCNE4Q8WWG9 221 aa16.78■□□□□ 0.28
USP48-210ENST00000489108 TATDN2Q93075 761 aa16.78■□□□□ 0.28
USP48-210ENST00000489108 LRRC4Q9HBW1 653 aa16.78■□□□□ 0.28
USP48-210ENST00000489108 CISHQ9NSE2 258 aa16.78■□□□□ 0.28
USP48-210ENST00000489108 EDDM13A0A1B0GTR0 161 aa16.77■□□□□ 0.28
USP48-210ENST00000489108 OPA1O60313 960 aa16.77■□□□□ 0.28
USP48-210ENST00000489108 ACSL4O60488 711 aa16.77■□□□□ 0.28
USP48-210ENST00000489108 CUTAO60888 179 aa16.77■□□□□ 0.28
USP48-210ENST00000489108 USP12O75317 370 aa16.77■□□□□ 0.28
USP48-210ENST00000489108 DXOO77932 396 aaKnown RBP16.77■□□□□ 0.28
USP48-210ENST00000489108 PDIA4P13667 645 aaKnown RBP16.77■□□□□ 0.28
USP48-210ENST00000489108 C5AR1P21730 350 aa16.77■□□□□ 0.28
USP48-210ENST00000489108 MAT2AP31153 395 aaKnown RBP16.77■□□□□ 0.28
USP48-210ENST00000489108 LSSP48449 732 aa16.77■□□□□ 0.28
USP48-210ENST00000489108 SLC11A2P49281 568 aa16.77■□□□□ 0.28
USP48-210ENST00000489108 RPS24P62847 133 aaKnown RBP16.77■□□□□ 0.28
USP48-210ENST00000489108 ADIGQ0VDE8 80 aa16.77■□□□□ 0.28
USP48-210ENST00000489108 KMT5BQ4FZB7 885 aa16.77■□□□□ 0.28
USP48-210ENST00000489108 FSCBQ5H9T9 825 aa16.77■□□□□ 0.28
USP48-210ENST00000489108 CARNMT1Q8N4J0 409 aa16.77■□□□□ 0.28
USP48-210ENST00000489108 ZNF557Q8N988 423 aaPredicted RBP16.77■□□□□ 0.28
USP48-210ENST00000489108 KDM1BQ8NB78 822 aa16.77■□□□□ 0.28
USP48-210ENST00000489108 CCDC150Q8NCX0 1101 aa16.77■□□□□ 0.28
USP48-210ENST00000489108 SNRNP27Q8WVK2 155 aaKnown RBP16.77■□□□□ 0.28
USP48-210ENST00000489108 MYEOVQ96EZ4 313 aa16.77■□□□□ 0.28
USP48-210ENST00000489108 MED8Q96G25 268 aa16.77■□□□□ 0.28
USP48-210ENST00000489108 IPO9Q96P70 1041 aaKnown RBP16.77■□□□□ 0.28
USP48-210ENST00000489108 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.77■□□□□ 0.28
USP48-210ENST00000489108 IRX2Q9BZI1 471 aaPredicted RBP16.77■□□□□ 0.28
USP48-210ENST00000489108 ZSCAN16Q9H4T2 348 aaPredicted RBP16.77■□□□□ 0.28
USP48-210ENST00000489108 ABCC13Q9NSE7 274 aa16.77■□□□□ 0.28
USP48-210ENST00000489108 TPX2Q9ULW0 747 aaKnown RBP16.77■□□□□ 0.28
USP48-210ENST00000489108 XPO1O14980 1071 aaKnown RBP16.76■□□□□ 0.27
USP48-210ENST00000489108 IRAK2O43187 625 aa16.76■□□□□ 0.27
USP48-210ENST00000489108 MAGEC1O60732 1142 aa16.76■□□□□ 0.27
USP48-210ENST00000489108 ADH1BP00325 375 aa16.76■□□□□ 0.27
USP48-210ENST00000489108 IL1BP01584 269 aa16.76■□□□□ 0.27
USP48-210ENST00000489108 SRPRAP08240 638 aaKnown RBP16.76■□□□□ 0.27
USP48-210ENST00000489108 ERVPABLB-1P60509 514 aa16.76■□□□□ 0.27
USP48-210ENST00000489108 STAT4Q14765 748 aa16.76■□□□□ 0.27
USP48-210ENST00000489108 GOLGA7BQ2TAP0 167 aa16.76■□□□□ 0.27
USP48-210ENST00000489108 PITRM1Q5JRX3 1037 aa16.76■□□□□ 0.27
USP48-210ENST00000489108 NADSYN1Q6IA69 706 aa16.76■□□□□ 0.27
USP48-210ENST00000489108 TMC6Q7Z403 805 aa16.76■□□□□ 0.27
USP48-210ENST00000489108 IQCHQ86VS3 1027 aa16.76■□□□□ 0.27
USP48-210ENST00000489108 UNC45BQ8IWX7 931 aa16.76■□□□□ 0.27
USP48-210ENST00000489108 SEMA4DQ92854 862 aa16.76■□□□□ 0.27
USP48-210ENST00000489108 PTPRN2Q92932 1015 aa16.76■□□□□ 0.27
USP48-210ENST00000489108 PRICKLE1Q96MT3 831 aaPredicted RBP16.76■□□□□ 0.27
USP48-210ENST00000489108 DPH1Q9BZG8 443 aa16.76■□□□□ 0.27
USP48-210ENST00000489108 OSBPL2Q9H1P3 480 aa16.76■□□□□ 0.27
USP48-210ENST00000489108 POLR1BQ9H9Y6 1135 aa16.76■□□□□ 0.27
USP48-210ENST00000489108 UCKL1Q9NWZ5 548 aa16.76■□□□□ 0.27
USP48-210ENST00000489108 CYTH4Q9UIA0 394 aa16.76■□□□□ 0.27
USP48-210ENST00000489108 CA5BQ9Y2D0 317 aa16.76■□□□□ 0.27
USP48-210ENST00000489108 PIEZO2Q9H5I5 2752 aa16.76■□□□□ 0.27
USP48-210ENST00000489108 ITIH6Q6UXX5 1313 aa16.75■□□□□ 0.27
USP48-210ENST00000489108 RTN2O75298 545 aa16.75■□□□□ 0.27
USP48-210ENST00000489108 CSO75390 466 aaKnown RBP16.75■□□□□ 0.27
USP48-210ENST00000489108 IGLV3-27P01718 113 aa16.75■□□□□ 0.27
USP48-210ENST00000489108 MYF5P13349 255 aa16.75■□□□□ 0.27
USP48-210ENST00000489108 DGKAP23743 735 aa16.75■□□□□ 0.27
USP48-210ENST00000489108 MZF1P28698 734 aaPredicted RBP16.75■□□□□ 0.27
USP48-210ENST00000489108 DRD3P35462 400 aa16.75■□□□□ 0.27
USP48-210ENST00000489108 METAP1P53582 386 aa16.75■□□□□ 0.27
USP48-210ENST00000489108 ECT2LQ008S8 904 aa16.75■□□□□ 0.27
USP48-210ENST00000489108 OVGP1Q12889 678 aa16.75■□□□□ 0.27
USP48-210ENST00000489108 KIAA1614Q5VZ46 1190 aa16.75■□□□□ 0.27
USP48-210ENST00000489108 CFAP52Q8N1V2 620 aa16.75■□□□□ 0.27
USP48-210ENST00000489108 TTC39CQ8N584 583 aa16.75■□□□□ 0.27
USP48-210ENST00000489108 HJURPQ8NCD3 748 aaPredicted RBP16.75■□□□□ 0.27
USP48-210ENST00000489108 OR4C6Q8NH72 309 aa16.75■□□□□ 0.27
USP48-210ENST00000489108 UBA3Q8TBC4 463 aa16.75■□□□□ 0.27
USP48-210ENST00000489108 VCPIP1Q96JH7 1222 aa16.75■□□□□ 0.27
USP48-210ENST00000489108 RPL10LQ96L21 214 aaKnown RBP16.75■□□□□ 0.27
USP48-210ENST00000489108 DEPDC7Q96QD5 511 aa16.75■□□□□ 0.27
USP48-210ENST00000489108 CAAP1Q9H8G2 361 aa16.75■□□□□ 0.27
USP48-210ENST00000489108 ASCL3Q9NQ33 180 aa16.75■□□□□ 0.27
USP48-210ENST00000489108 EXOC1Q9NV70 894 aa16.75■□□□□ 0.27
USP48-210ENST00000489108 TSPAN16Q9UKR8 245 aa16.75■□□□□ 0.27
USP48-210ENST00000489108 NYNRINQ9P2P1 1898 aaKnown RBP16.74■□□□□ 0.27
USP48-210ENST00000489108 A0A1B0GVM2 712 aa16.74■□□□□ 0.27
USP48-210ENST00000489108 MAPK13O15264 365 aa16.74■□□□□ 0.27
USP48-210ENST00000489108 FFAR2O15552 330 aa16.74■□□□□ 0.27
USP48-210ENST00000489108 LCP1P13796 627 aa16.74■□□□□ 0.27
USP48-210ENST00000489108 VAV1P15498 845 aa16.74■□□□□ 0.27
USP48-210ENST00000489108 TBX4P57082 545 aa16.74■□□□□ 0.27
USP48-210ENST00000489108 CDH18Q13634 790 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms