RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 ANP32BQ92688 251 aaKnown RBP8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 P2RX5Q93086 422 aa8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 AHCYL2Q96HN2 611 aaKnown RBP8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 NOX5Q96PH1 765 aa8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 TSG101Q99816 390 aa8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 SYT3Q9BQG1 590 aa8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 COLEC11Q9BWP8 271 aa8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 CLSTN2Q9H4D0 955 aa8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 CWH43Q9H720 699 aa8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 ZMAT4Q9H898 229 aa8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 SPG21Q9NZD8 308 aa8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 STK39Q9UEW8 545 aa8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 ZFP69BQ9UJL9 534 aa8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 FNDC1Q4ZHG4 1894 aaPredicted RBP8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 MYO10Q9HD67 2058 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 CHD6Q8TD26 2715 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 PKD1L2Q7Z442 2459 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 ZNF233A6NK53 670 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 TISP43B9A030 160 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 PSMA7O14818 248 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 CLIC2O15247 247 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 KDM1AO60341 852 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 EXOC3O60645 756 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 IL18RAPO95256 599 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 GLP2RO95838 553 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 GALTP07902 379 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 LINC00271P0C7V0 271 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 CXCL8P10145 99 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 KCNE1P15382 129 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 RPL13P26373 211 aaKnown RBP8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 ADSSP30520 456 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 ACOT2P49753 483 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 CYP2J2P51589 502 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 ALDH6A1Q02252 535 aaKnown RBP8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 UBE3AQ05086 875 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 CAMK1Q14012 370 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 LRRC55Q6ZSA7 311 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 RBM23Q86U06 439 aaKnown RBP8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 TMEFF1Q8IYR6 380 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 POU5F2Q8N7G0 328 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 CNTD1Q8N815 330 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 LINC00482Q8N8I6 264 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 XXYLT1Q8NBI6 393 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 CLRN3Q8NCR9 226 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 SPATA20Q8TB22 786 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 COG1Q8WTW3 980 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 SAAL1Q96ER3 474 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 UROC1Q96N76 676 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 FOXB1Q99853 325 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 CBWD1Q9BRT8 395 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 FAM213AQ9BRX8 229 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 TACO1Q9BSH4 297 aaKnown RBP8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 ZDHHC5Q9C0B5 715 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 ASB7Q9H672 318 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 NRDE2Q9H7Z3 1164 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 TLE6Q9H808 572 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 AGPAT3Q9NRZ7 376 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 MIOSQ9NXC5 875 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 DDX56Q9NY93 547 aaKnown RBP8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 RBAKQ9NYW8 714 aaPredicted RBP8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 CPSF3Q9UKF6 684 aaKnown RBP8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 MAN1B1Q9UKM7 699 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 FRMD4BQ9Y2L6 1034 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 NR2E1Q9Y466 385 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 ATRXP46100 2492 aa8.61□□□□□ -1.03
TRAPPC12-221ENST00000489032 SMIM28A0A1B0GU29 152 aa8.6□□□□□ -1.03
TRAPPC12-221ENST00000489032 GOLGA8IPA6NC78 632 aa8.6□□□□□ -1.03
TRAPPC12-221ENST00000489032 GOLGA8JA6NMD2 632 aa8.6□□□□□ -1.03
TRAPPC12-221ENST00000489032 PTGESO14684 152 aa8.6□□□□□ -1.03
TRAPPC12-221ENST00000489032 NRP1O14786 923 aa8.6□□□□□ -1.03
TRAPPC12-221ENST00000489032 TGFB1I1O43294 461 aa8.6□□□□□ -1.03
TRAPPC12-221ENST00000489032 TADA2AO75478 443 aa8.6□□□□□ -1.03
TRAPPC12-221ENST00000489032 FGF18O76093 207 aa8.6□□□□□ -1.03
TRAPPC12-221ENST00000489032 DDHD2O94830 711 aa8.6□□□□□ -1.03
TRAPPC12-221ENST00000489032 TSPAN15O95858 294 aa8.6□□□□□ -1.03
TRAPPC12-221ENST00000489032 SRGAP2BP0DMP2 458 aa8.6□□□□□ -1.03
TRAPPC12-221ENST00000489032 SP100P23497 879 aaPredicted RBP8.6□□□□□ -1.03
TRAPPC12-221ENST00000489032 HOXD13P35453 343 aa8.6□□□□□ -1.03
TRAPPC12-221ENST00000489032 TNFSF9P41273 254 aa8.6□□□□□ -1.03
TRAPPC12-221ENST00000489032 DSC1Q08554 894 aa8.6□□□□□ -1.03
TRAPPC12-221ENST00000489032 ADAM9Q13443 819 aa8.6□□□□□ -1.03
TRAPPC12-221ENST00000489032 MYBPC2Q14324 1141 aa8.6□□□□□ -1.03
TRAPPC12-221ENST00000489032 SSPNQ14714 243 aa8.6□□□□□ -1.03
TRAPPC12-221ENST00000489032 TMEM132DQ14C87 1099 aa8.6□□□□□ -1.03
TRAPPC12-221ENST00000489032 COBLL1Q53SF7 1204 aa8.6□□□□□ -1.03
TRAPPC12-221ENST00000489032 XKR4Q5GH76 650 aa8.6□□□□□ -1.03
TRAPPC12-221ENST00000489032 GLRA4Q5JXX5 417 aa8.6□□□□□ -1.03
TRAPPC12-221ENST00000489032 PHF19Q5T6S3 580 aa8.6□□□□□ -1.03
TRAPPC12-221ENST00000489032 ISM2Q6H9L7 571 aa8.6□□□□□ -1.03
TRAPPC12-221ENST00000489032 ALKAL1Q6UXT8 129 aa8.6□□□□□ -1.03
TRAPPC12-221ENST00000489032 USP37Q86T82 979 aa8.6□□□□□ -1.03
TRAPPC12-221ENST00000489032 ZNF280BQ86YH2 543 aa8.6□□□□□ -1.03
TRAPPC12-221ENST00000489032 BRSK2Q8IWQ3 736 aa8.6□□□□□ -1.03
TRAPPC12-221ENST00000489032 C12orf56Q8IXR9 622 aa8.6□□□□□ -1.03
TRAPPC12-221ENST00000489032 CCDC105Q8IYK2 499 aa8.6□□□□□ -1.03
TRAPPC12-221ENST00000489032 COLGALT2Q8IYK4 626 aa8.6□□□□□ -1.03
TRAPPC12-221ENST00000489032 STPG3Q8N7X2 389 aa8.6□□□□□ -1.03
TRAPPC12-221ENST00000489032 BEST2Q8NFU1 509 aa8.6□□□□□ -1.03
TRAPPC12-221ENST00000489032 CACTINQ8WUQ7 758 aaKnown RBP8.6□□□□□ -1.03
TRAPPC12-221ENST00000489032 RUBCNQ92622 972 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms