RNA–Protein interactions for RNA: ENST00000488553.3

RN7SL561P-201, Transcript of RNA, 7SL, cytoplasmic 561, pseudogene, humanhuman

BASIC

Gene RN7SL561P, Length 281 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL561P-201ENST00000488553 TBX4P57082 545 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 C1QTNF8P60827 252 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 RPL10AP62906 217 aaKnown RBP6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 IL9RQ01113 521 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 TLE2Q04725 743 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 SLC18A2Q05940 514 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 SPARCL1Q14515 664 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 TRIP4Q15650 581 aaPredicted RBP6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 SLC1A5Q15758 541 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 LGSNQ5TDP6 509 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 RASIP1Q5U651 963 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 TTC39BQ5VTQ0 682 aaPredicted RBP6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 ITPRIPL1Q6GPH6 555 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 SLC8B1Q6J4K2 584 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 RGS9BPQ6ZS82 235 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 MICALCLQ6ZW33 695 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 C14orf80Q86SX3 495 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 TMEM173Q86WV6 379 aaPredicted RBP6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 LRRC6Q86X45 466 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 LRRC49Q8IUZ0 686 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 ZNF683Q8IZ20 524 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 C4orf33Q8N1A6 199 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 ZNF276Q8N554 614 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 TTC9BQ8N6N2 239 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 CNTD1Q8N815 330 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 BANPQ8N9N5 519 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 GSDMBQ8TAX9 411 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 GPR152Q8TDT2 470 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 DYDC1Q8WWB3 177 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 ARNTL2Q8WYA1 636 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 TTC17Q96AE7 1141 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 ALKBH8Q96BT7 664 aaKnown RBP6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 TBC1D31Q96DN5 1066 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 STAMBPL1Q96FJ0 436 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 CEP295NLQ96MC4 621 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 SERPINB11Q96P15 392 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 NAT9Q9BTE0 207 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 TTLL2Q9BWV7 592 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 SLC39A8Q9C0K1 460 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 FAM107BQ9H098 131 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 CRISPLD1Q9H336 500 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 CWH43Q9H720 699 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 KIF9Q9HAQ2 790 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 CASS4Q9NQ75 786 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 OLA1Q9NTK5 396 aaKnown RBP6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 GMIPQ9P107 970 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 FNIP2Q9P278 1114 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 KLHL8Q9P2G9 620 aaPredicted RBP6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 PPARGC1AQ9UBK2 798 aaKnown RBP6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 HCSTQ9UBK5 93 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 NUDT5Q9UKK9 219 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 RRP15Q9Y3B9 282 aaKnown RBP6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 BACE2Q9Y5Z0 518 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 HS3ST4Q9Y661 456 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 MAD1L1Q9Y6D9 718 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 IKBKGQ9Y6K9 419 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 FAM169AQ9Y6X4 670 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 MAGEB16A2A368 324 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 WDR27A2RRH5 827 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 TCP11X1B4DZS4 312 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 E9PAM4 449 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 F5H423 210 aaPredicted RBP6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 MATN3O15232 486 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 ADAM12O43184 909 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 SOAT2O75908 522 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 ZWINTO95229 277 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 TBX18O95935 607 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 CPP00450 1065 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 IGLV3-27P01718 113 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 INHBAP08476 426 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 SNRPAP09012 282 aaKnown RBP6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 CCNB1P14635 433 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 CPB1P15086 417 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 RHOQP17081 205 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 PGAM1P18669 254 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 MGAT1P26572 445 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 PBX3P40426 434 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 ALDH7A1P49419 539 aaKnown RBP6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 CORO7P57737 925 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 TAF10Q12962 218 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 ZBTB17Q13105 803 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 DUSP4Q13115 394 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 IKBKEQ14164 716 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 FRG1Q14331 258 aaKnown RBP6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 ITIH4Q14624 930 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 USP41Q3LFD5 358 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 TRIM60Q495X7 471 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 ACBD5Q5T8D3 534 aaPredicted RBP6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 PIK3R6Q5UE93 754 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 SNX30Q5VWJ9 437 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 RWDD4Q6NW29 188 aaKnown RBP6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 ZNF449Q6P9G9 518 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 CNKSR3Q6P9H4 555 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 TRMT10BQ6PF06 316 aaKnown RBP6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 TIFABQ6ZNK6 161 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 DEFB128Q7Z7B8 93 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 SRLQ86TD4 932 aa6.9□□□□□ -1.3
RN7SL561P-201ENST00000488553 RNF168Q8IYW5 571 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms