RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 SLC12A1Q13621 1099 aa23.34■■□□□ 1.33
PTPN4-211ENST00000488279 TRIP6Q15654 476 aaKnown RBP23.34■■□□□ 1.33
PTPN4-211ENST00000488279 DPCR1Q3MIW9 517 aa23.34■■□□□ 1.33
PTPN4-211ENST00000488279 RABGAP1LQ5R372 815 aa23.34■■□□□ 1.33
PTPN4-211ENST00000488279 C9orf64Q5T6V5 341 aa23.34■■□□□ 1.33
PTPN4-211ENST00000488279 TTC39BQ5VTQ0 682 aaPredicted RBP23.34■■□□□ 1.33
PTPN4-211ENST00000488279 FAM183BPQ6ZVS7 135 aa23.34■■□□□ 1.33
PTPN4-211ENST00000488279 FAM71AQ8IYT1 594 aa23.34■■□□□ 1.33
PTPN4-211ENST00000488279 APCDD1Q8J025 514 aa23.34■■□□□ 1.33
PTPN4-211ENST00000488279 BIRC7Q96CA5 298 aa23.34■■□□□ 1.33
PTPN4-211ENST00000488279 CAMK1GQ96NX5 476 aa23.34■■□□□ 1.33
PTPN4-211ENST00000488279 PRMT1Q99873 361 aaKnown RBP23.34■■□□□ 1.33
PTPN4-211ENST00000488279 ADAM33Q9BZ11 813 aa23.34■■□□□ 1.33
PTPN4-211ENST00000488279 PABPC3Q9H361 631 aaKnown RBP23.34■■□□□ 1.33
PTPN4-211ENST00000488279 GAREM1Q9H706 876 aa23.34■■□□□ 1.33
PTPN4-211ENST00000488279 FBXL12Q9NXK8 326 aa23.34■■□□□ 1.33
PTPN4-211ENST00000488279 ASPMQ8IZT6 3477 aa23.33■■□□□ 1.33
PTPN4-211ENST00000488279 EDDM13A0A1B0GTR0 161 aa23.33■■□□□ 1.33
PTPN4-211ENST00000488279 TTC34A8MYJ7 566 aa23.33■■□□□ 1.33
PTPN4-211ENST00000488279 FSBPO95073 299 aa23.33■■□□□ 1.33
PTPN4-211ENST00000488279 TRIM16O95361 564 aa23.33■■□□□ 1.33
PTPN4-211ENST00000488279 ERBB2P04626 1255 aa23.33■■□□□ 1.33
PTPN4-211ENST00000488279 NNMTP40261 264 aa23.33■■□□□ 1.33
PTPN4-211ENST00000488279 MATKP42679 507 aa23.33■■□□□ 1.33
PTPN4-211ENST00000488279 CSNK1EP49674 416 aaKnown RBP23.33■■□□□ 1.33
PTPN4-211ENST00000488279 SLC6A3Q01959 620 aa23.33■■□□□ 1.33
PTPN4-211ENST00000488279 TEAD4Q15561 434 aa23.33■■□□□ 1.33
PTPN4-211ENST00000488279 HLA-BQ31612 363 aa23.33■■□□□ 1.33
PTPN4-211ENST00000488279 HSP90AA4PQ58FG1 418 aa23.33■■□□□ 1.33
PTPN4-211ENST00000488279 OLFML1Q6UWY5 402 aa23.33■■□□□ 1.33
PTPN4-211ENST00000488279 UNQ6494/PRO21346Q6UXR6 183 aa23.33■■□□□ 1.33
PTPN4-211ENST00000488279 NAXDQ8IW45 347 aa23.33■■□□□ 1.33
PTPN4-211ENST00000488279 CCAR2Q8N163 923 aaKnown RBP23.33■■□□□ 1.33
PTPN4-211ENST00000488279 PPP1R9BQ96SB3 815 aa23.33■■□□□ 1.33
PTPN4-211ENST00000488279 PDCL3Q9H2J4 239 aa23.33■■□□□ 1.33
PTPN4-211ENST00000488279 SLCO3A1Q9UIG8 710 aa23.33■■□□□ 1.33
PTPN4-211ENST00000488279 A0A1B0GVT2 93 aa23.32■■□□□ 1.32
PTPN4-211ENST00000488279 C1QTNF9BB2RNN3 333 aa23.32■■□□□ 1.32
PTPN4-211ENST00000488279 PES1O00541 588 aaKnown RBP23.32■■□□□ 1.32
PTPN4-211ENST00000488279 C1QTNF9P0C862 333 aa23.32■■□□□ 1.32
PTPN4-211ENST00000488279 ZNF883P0CG24 379 aa23.32■■□□□ 1.32
PTPN4-211ENST00000488279 CD27P26842 260 aa23.32■■□□□ 1.32
PTPN4-211ENST00000488279 NOS2P35228 1153 aa23.32■■□□□ 1.32
PTPN4-211ENST00000488279 OXCT1P55809 520 aa23.32■■□□□ 1.32
PTPN4-211ENST00000488279 BNC1Q01954 994 aa23.32■■□□□ 1.32
PTPN4-211ENST00000488279 SULT2A1Q06520 285 aa23.32■■□□□ 1.32
PTPN4-211ENST00000488279 NME3Q13232 169 aa23.32■■□□□ 1.32
PTPN4-211ENST00000488279 CST6Q15828 149 aa23.32■■□□□ 1.32
PTPN4-211ENST00000488279 MIIPQ5JXC2 388 aa23.32■■□□□ 1.32
PTPN4-211ENST00000488279 FBXL22Q6P050 247 aa23.32■■□□□ 1.32
PTPN4-211ENST00000488279 ZDHHC17Q8IUH5 632 aa23.32■■□□□ 1.32
PTPN4-211ENST00000488279 MMAAQ8IVH4 418 aaKnown RBP23.32■■□□□ 1.32
PTPN4-211ENST00000488279 RPL10LQ96L21 214 aaKnown RBP23.32■■□□□ 1.32
PTPN4-211ENST00000488279 NUP62CLQ9H1M0 184 aa23.32■■□□□ 1.32
PTPN4-211ENST00000488279 IL21RQ9HBE5 538 aa23.32■■□□□ 1.32
PTPN4-211ENST00000488279 OSGEPQ9NPF4 335 aa23.32■■□□□ 1.32
PTPN4-211ENST00000488279 CACNA1EQ15878 2313 aa23.32■■□□□ 1.32
PTPN4-211ENST00000488279 A0A1B0GVM2 712 aa23.31■■□□□ 1.32
PTPN4-211ENST00000488279 TCAF2A6NFQ2 919 aa23.31■■□□□ 1.32
PTPN4-211ENST00000488279 MID1O15344 667 aa23.31■■□□□ 1.32
PTPN4-211ENST00000488279 HYAL3O43820 417 aaPredicted RBP23.31■■□□□ 1.32
PTPN4-211ENST00000488279 PNMA6AP0CW24 399 aaPredicted RBP23.31■■□□□ 1.32
PTPN4-211ENST00000488279 PDGFRAP16234 1089 aa23.31■■□□□ 1.32
PTPN4-211ENST00000488279 AUHQ13825 339 aaKnown RBP23.31■■□□□ 1.32
PTPN4-211ENST00000488279 RAPGEF1Q13905 1077 aa23.31■■□□□ 1.32
PTPN4-211ENST00000488279 ZNF423Q2M1K9 1284 aa23.31■■□□□ 1.32
PTPN4-211ENST00000488279 PTPN20Q4JDL3 420 aa23.31■■□□□ 1.32
PTPN4-211ENST00000488279 SLC26A9Q7LBE3 791 aa23.31■■□□□ 1.32
PTPN4-211ENST00000488279 CIR1Q86X95 450 aaPredicted RBP23.31■■□□□ 1.32
PTPN4-211ENST00000488279 RPRD1AQ96P16 312 aaPredicted RBP23.31■■□□□ 1.32
PTPN4-211ENST00000488279 OMDQ99983 421 aa23.31■■□□□ 1.32
PTPN4-211ENST00000488279 TM9SF3Q9HD45 589 aa23.31■■□□□ 1.32
PTPN4-211ENST00000488279 PLCB1Q9NQ66 1216 aa23.31■■□□□ 1.32
PTPN4-211ENST00000488279 TM7SF3Q9NS93 570 aa23.31■■□□□ 1.32
PTPN4-211ENST00000488279 NEUROG3Q9Y4Z2 214 aa23.31■■□□□ 1.32
PTPN4-211ENST00000488279 SLCO1B1Q9Y6L6 691 aa23.31■■□□□ 1.32
PTPN4-211ENST00000488279 MUC22E2RYF6 1773 aaPredicted RBP23.31■■□□□ 1.32
PTPN4-211ENST00000488279 ITIH6Q6UXX5 1313 aa23.31■■□□□ 1.32
PTPN4-211ENST00000488279 FAM47DPA6NHR8 397 aa23.3■■□□□ 1.32
PTPN4-211ENST00000488279 M0QYT0 321 aa23.3■■□□□ 1.32
PTPN4-211ENST00000488279 MZF1P28698 734 aaPredicted RBP23.3■■□□□ 1.32
PTPN4-211ENST00000488279 SLC8A1P32418 973 aa23.3■■□□□ 1.32
PTPN4-211ENST00000488279 PLK1P53350 603 aa23.3■■□□□ 1.32
PTPN4-211ENST00000488279 DRAP1Q14919 205 aaPredicted RBP23.3■■□□□ 1.32
PTPN4-211ENST00000488279 KIF19Q2TAC6 998 aa23.3■■□□□ 1.32
PTPN4-211ENST00000488279 CT47A1Q5JQC4 288 aaPredicted RBP23.3■■□□□ 1.32
PTPN4-211ENST00000488279 KLHDC7AQ5VTJ3 777 aa23.3■■□□□ 1.32
PTPN4-211ENST00000488279 KIAA0895LQ68EN5 471 aa23.3■■□□□ 1.32
PTPN4-211ENST00000488279 DPY19L2P1Q6NXN4 242 aa23.3■■□□□ 1.32
PTPN4-211ENST00000488279 LRSAM1Q6UWE0 723 aa23.3■■□□□ 1.32
PTPN4-211ENST00000488279 TMEM35BQ8NCS4 154 aa23.3■■□□□ 1.32
PTPN4-211ENST00000488279 ZNF397Q8NF99 534 aaPredicted RBP23.3■■□□□ 1.32
PTPN4-211ENST00000488279 SETD7Q8WTS6 366 aaKnown RBP23.3■■□□□ 1.32
PTPN4-211ENST00000488279 NEUROG2Q9H2A3 272 aa23.3■■□□□ 1.32
PTPN4-211ENST00000488279 RRN3Q9NYV6 651 aa23.3■■□□□ 1.32
PTPN4-211ENST00000488279 ANKRD6Q9Y2G4 727 aa23.3■■□□□ 1.32
PTPN4-211ENST00000488279 CFAP47Q6ZTR5 3102 aa23.29■■□□□ 1.32
PTPN4-211ENST00000488279 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.29■■□□□ 1.32
PTPN4-211ENST00000488279 A0A1W2PP55 124 aa23.29■■□□□ 1.32
PTPN4-211ENST00000488279 DAB1O75553 588 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms