RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 TMEM215Q68D42 235 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 LRRC31Q6UY01 552 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 CHST9Q7L1S5 443 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.38□□□□□ -0.59
UBE4B-210ENST00000488228 RPLP0P6Q8NHW5 317 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 SORCS1Q8WY21 1168 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 EXOC4Q96A65 974 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 CLDN23Q96B33 292 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 TBC1D31Q96DN5 1066 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 C1orf74Q96LT6 269 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 NELL2Q99435 816 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 EPAS1Q99814 870 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 SLC2A11Q9BYW1 496 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 OSBPL6Q9BZF3 934 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 ZYG11BQ9C0D3 744 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 OSBPL2Q9H1P3 480 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 CHRDQ9H2X0 955 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 KCNF1Q9H3M0 494 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 POLR3BQ9NW08 1133 aaPredicted RBP11.38□□□□□ -0.59
UBE4B-210ENST00000488228 C2orf42Q9NWW7 574 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 ZNF212Q9UDV6 495 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 HCN2Q9UL51 889 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 SLC27A6Q9Y2P4 619 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 ADGRG1Q9Y653 693 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 FANCMQ8IYD8 2048 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 CACNA1HO95180 2353 aa11.38□□□□□ -0.59
UBE4B-210ENST00000488228 A0A0A6YYK5 440 aaPredicted RBP11.37□□□□□ -0.59
UBE4B-210ENST00000488228 MACROD2A1Z1Q3 448 aa11.37□□□□□ -0.59
UBE4B-210ENST00000488228 DRGXA6NNA5 263 aa11.37□□□□□ -0.59
UBE4B-210ENST00000488228 PJA2O43164 708 aa11.37□□□□□ -0.59
UBE4B-210ENST00000488228 CLDN11O75508 207 aa11.37□□□□□ -0.59
UBE4B-210ENST00000488228 RARAP10276 462 aa11.37□□□□□ -0.59
UBE4B-210ENST00000488228 L1CAMP32004 1257 aa11.37□□□□□ -0.59
UBE4B-210ENST00000488228 TIE1P35590 1138 aa11.37□□□□□ -0.59
UBE4B-210ENST00000488228 RPS9P46781 194 aaKnown RBP11.37□□□□□ -0.59
UBE4B-210ENST00000488228 CDH4P55283 916 aa11.37□□□□□ -0.59
UBE4B-210ENST00000488228 TPI1P60174 286 aa11.37□□□□□ -0.59
UBE4B-210ENST00000488228 KRT83P78385 493 aa11.37□□□□□ -0.59
UBE4B-210ENST00000488228 MTAPQ13126 283 aa11.37□□□□□ -0.59
UBE4B-210ENST00000488228 PITRM1Q5JRX3 1037 aa11.37□□□□□ -0.59
UBE4B-210ENST00000488228 ERMARDQ5T6L9 678 aa11.37□□□□□ -0.59
UBE4B-210ENST00000488228 EMC10Q5UCC4 262 aa11.37□□□□□ -0.59
UBE4B-210ENST00000488228 CCDC117Q8IWD4 279 aaPredicted RBP11.37□□□□□ -0.59
UBE4B-210ENST00000488228 AHI1Q8N157 1196 aa11.37□□□□□ -0.59
UBE4B-210ENST00000488228 CCDC33Q8N5R6 958 aa11.37□□□□□ -0.59
UBE4B-210ENST00000488228 ALLCQ8N6M5 410 aa11.37□□□□□ -0.59
UBE4B-210ENST00000488228 FIBINQ8TAL6 211 aa11.37□□□□□ -0.59
UBE4B-210ENST00000488228 USP33Q8TEY7 942 aa11.37□□□□□ -0.59
UBE4B-210ENST00000488228 LMLNQ96KR4 655 aa11.37□□□□□ -0.59
UBE4B-210ENST00000488228 CIPCQ9C0C6 399 aa11.37□□□□□ -0.59
UBE4B-210ENST00000488228 INTS6Q9UL03 887 aaKnown RBP11.37□□□□□ -0.59
UBE4B-210ENST00000488228 ANKRD36A6QL64 1941 aa11.37□□□□□ -0.59
UBE4B-210ENST00000488228 WDFY4Q6ZS81 3184 aa11.36□□□□□ -0.59
UBE4B-210ENST00000488228 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.36□□□□□ -0.59
UBE4B-210ENST00000488228 EEF2KO00418 725 aaKnown RBP11.36□□□□□ -0.59
UBE4B-210ENST00000488228 NCAM2O15394 837 aa11.36□□□□□ -0.59
UBE4B-210ENST00000488228 SPOPO43791 374 aa11.36□□□□□ -0.59
UBE4B-210ENST00000488228 KLF8O95600 359 aaPredicted RBP11.36□□□□□ -0.59
UBE4B-210ENST00000488228 RHOCP08134 193 aa11.36□□□□□ -0.59
UBE4B-210ENST00000488228 CD48P09326 243 aa11.36□□□□□ -0.59
UBE4B-210ENST00000488228 TNNT1P13805 278 aa11.36□□□□□ -0.59
UBE4B-210ENST00000488228 GOT1P17174 413 aa11.36□□□□□ -0.59
UBE4B-210ENST00000488228 COMTP21964 271 aa11.36□□□□□ -0.59
UBE4B-210ENST00000488228 MZF1P28698 734 aaPredicted RBP11.36□□□□□ -0.59
UBE4B-210ENST00000488228 EPHB2P29323 1055 aa11.36□□□□□ -0.59
UBE4B-210ENST00000488228 AVPR2P30518 371 aa11.36□□□□□ -0.59
UBE4B-210ENST00000488228 HOXC13P31276 330 aa11.36□□□□□ -0.59
UBE4B-210ENST00000488228 WASP42768 502 aa11.36□□□□□ -0.59
UBE4B-210ENST00000488228 KIR2DL1P43626 348 aaPredicted RBP11.36□□□□□ -0.59
UBE4B-210ENST00000488228 MARCKSL1P49006 195 aa11.36□□□□□ -0.59
UBE4B-210ENST00000488228 HADHBP55084 474 aaKnown RBP11.36□□□□□ -0.59
UBE4B-210ENST00000488228 ZNF177Q13360 481 aaPredicted RBP11.36□□□□□ -0.59
UBE4B-210ENST00000488228 DPYSL2Q16555 572 aa11.36□□□□□ -0.59
UBE4B-210ENST00000488228 PLEKHG6Q3KR16 790 aa11.36□□□□□ -0.59
UBE4B-210ENST00000488228 FBXO43Q4G163 708 aa11.36□□□□□ -0.59
UBE4B-210ENST00000488228 ATP13A4Q4VNC1 1196 aa11.36□□□□□ -0.59
UBE4B-210ENST00000488228 ACBD5Q5T8D3 534 aaPredicted RBP11.36□□□□□ -0.59
UBE4B-210ENST00000488228 MBLAC2Q68D91 279 aa11.36□□□□□ -0.59
UBE4B-210ENST00000488228 C11orf63Q6NUN7 778 aa11.36□□□□□ -0.59
UBE4B-210ENST00000488228 ADIPOR2Q86V24 386 aa11.36□□□□□ -0.59
UBE4B-210ENST00000488228 NLRP14Q86W24 1093 aa11.36□□□□□ -0.59
UBE4B-210ENST00000488228 APCDD1Q8J025 514 aa11.36□□□□□ -0.59
UBE4B-210ENST00000488228 ZNF513Q8N8E2 541 aaPredicted RBP11.36□□□□□ -0.59
UBE4B-210ENST00000488228 ZNF557Q8N988 423 aaPredicted RBP11.36□□□□□ -0.59
UBE4B-210ENST00000488228 DTWD2Q8NBA8 298 aa11.36□□□□□ -0.59
UBE4B-210ENST00000488228 TPCN2Q8NHX9 752 aa11.36□□□□□ -0.59
UBE4B-210ENST00000488228 WFIKKN2Q8TEU8 576 aa11.36□□□□□ -0.59
UBE4B-210ENST00000488228 CYB5D2Q8WUJ1 264 aa11.36□□□□□ -0.59
UBE4B-210ENST00000488228 TEKT4Q8WW24 435 aa11.36□□□□□ -0.59
UBE4B-210ENST00000488228 ERLEC1Q96DZ1 483 aa11.36□□□□□ -0.59
UBE4B-210ENST00000488228 ZNF830Q96NB3 372 aaPredicted RBP11.36□□□□□ -0.59
UBE4B-210ENST00000488228 ACOX2Q99424 681 aa11.36□□□□□ -0.59
UBE4B-210ENST00000488228 NCAPGQ9BPX3 1015 aa11.36□□□□□ -0.59
UBE4B-210ENST00000488228 PCDH18Q9HCL0 1135 aa11.36□□□□□ -0.59
UBE4B-210ENST00000488228 NDFIP2Q9NV92 336 aa11.36□□□□□ -0.59
UBE4B-210ENST00000488228 SPATA6Q9NWH7 488 aaPredicted RBP11.36□□□□□ -0.59
UBE4B-210ENST00000488228 CACNA2D2Q9NY47 1150 aa11.36□□□□□ -0.59
UBE4B-210ENST00000488228 PPARGC1AQ9UBK2 798 aaKnown RBP11.36□□□□□ -0.59
UBE4B-210ENST00000488228 LCMT1Q9UIC8 334 aa11.36□□□□□ -0.59
UBE4B-210ENST00000488228 MFHAS1Q9Y4C4 1052 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms