RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 C6orf118Q5T5N4 469 aa16.2■□□□□ 0.18
C9orf3-219ENST00000488186 SDE2Q6IQ49 451 aa16.2■□□□□ 0.18
C9orf3-219ENST00000488186 TFAP2DQ7Z6R9 452 aa16.2■□□□□ 0.18
C9orf3-219ENST00000488186 AHI1Q8N157 1196 aa16.2■□□□□ 0.18
C9orf3-219ENST00000488186 P2RY11Q96G91 374 aa16.2■□□□□ 0.18
C9orf3-219ENST00000488186 PEBP4Q96S96 227 aa16.2■□□□□ 0.18
C9orf3-219ENST00000488186 MAGEB5Q9BZ81 275 aa16.2■□□□□ 0.18
C9orf3-219ENST00000488186 TSGA10Q9BZW7 698 aa16.2■□□□□ 0.18
C9orf3-219ENST00000488186 MUC3BQ9H195 1237 aa16.2■□□□□ 0.18
C9orf3-219ENST00000488186 CATSPERBQ9H7T0 1116 aa16.2■□□□□ 0.18
C9orf3-219ENST00000488186 DONSONQ9NYP3 566 aa16.2■□□□□ 0.18
C9orf3-219ENST00000488186 HCN4Q9Y3Q4 1203 aa16.2■□□□□ 0.18
C9orf3-219ENST00000488186 ADGRG1Q9Y653 693 aa16.2■□□□□ 0.18
C9orf3-219ENST00000488186 IGLV3-10A0A075B6K4 115 aa16.19■□□□□ 0.18
C9orf3-219ENST00000488186 A0A0A0MRY4 1105 aa16.19■□□□□ 0.18
C9orf3-219ENST00000488186 RCCD1A6NED2 376 aa16.19■□□□□ 0.18
C9orf3-219ENST00000488186 BTNL10A8MVZ5 291 aa16.19■□□□□ 0.18
C9orf3-219ENST00000488186 FAM72CH0Y354 149 aa16.19■□□□□ 0.18
C9orf3-219ENST00000488186 K7EQS6 105 aa16.19■□□□□ 0.18
C9orf3-219ENST00000488186 EEF2KO00418 725 aaKnown RBP16.19■□□□□ 0.18
C9orf3-219ENST00000488186 PJA2O43164 708 aa16.19■□□□□ 0.18
C9orf3-219ENST00000488186 RNF40O75150 1001 aa16.19■□□□□ 0.18
C9orf3-219ENST00000488186 ATP5BP06576 529 aaKnown RBP16.19■□□□□ 0.18
C9orf3-219ENST00000488186 RHOCP08134 193 aa16.19■□□□□ 0.18
C9orf3-219ENST00000488186 CCDC175P0C221 793 aa16.19■□□□□ 0.18
C9orf3-219ENST00000488186 TNNT1P13805 278 aa16.19■□□□□ 0.18
C9orf3-219ENST00000488186 RHOQP17081 205 aa16.19■□□□□ 0.18
C9orf3-219ENST00000488186 HLA-FP30511 346 aa16.19■□□□□ 0.18
C9orf3-219ENST00000488186 HTR7P34969 479 aa16.19■□□□□ 0.18
C9orf3-219ENST00000488186 TIE1P35590 1138 aa16.19■□□□□ 0.18
C9orf3-219ENST00000488186 ARL4AP40617 200 aa16.19■□□□□ 0.18
C9orf3-219ENST00000488186 ZNF135P52742 658 aaPredicted RBP16.19■□□□□ 0.18
C9orf3-219ENST00000488186 HADHBP55084 474 aaKnown RBP16.19■□□□□ 0.18
C9orf3-219ENST00000488186 CCDC173Q0VFZ6 552 aa16.19■□□□□ 0.18
C9orf3-219ENST00000488186 LMAN2Q12907 356 aa16.19■□□□□ 0.18
C9orf3-219ENST00000488186 SLC12A1Q13621 1099 aa16.19■□□□□ 0.18
C9orf3-219ENST00000488186 GEN1Q17RS7 908 aa16.19■□□□□ 0.18
C9orf3-219ENST00000488186 ALFQ53S48 1182 aa16.19■□□□□ 0.18
C9orf3-219ENST00000488186 FAM72AQ5TYM5 149 aa16.19■□□□□ 0.18
C9orf3-219ENST00000488186 FAM72DQ6L9T8 149 aa16.19■□□□□ 0.18
C9orf3-219ENST00000488186 TRMT11Q7Z4G4 463 aaKnown RBP16.19■□□□□ 0.18
C9orf3-219ENST00000488186 DAAM2Q86T65 1068 aa16.19■□□□□ 0.18
C9orf3-219ENST00000488186 FAM72BQ86X60 149 aa16.19■□□□□ 0.18
C9orf3-219ENST00000488186 ZNF683Q8IZ20 524 aa16.19■□□□□ 0.18
C9orf3-219ENST00000488186 PHTF2Q8N3S3 785 aa16.19■□□□□ 0.18
C9orf3-219ENST00000488186 KCTD6Q8NC69 237 aa16.19■□□□□ 0.18
C9orf3-219ENST00000488186 TEKT4Q8WW24 435 aa16.19■□□□□ 0.18
C9orf3-219ENST00000488186 LACRTQ9GZZ8 138 aa16.19■□□□□ 0.18
C9orf3-219ENST00000488186 RETREG1Q9H6L5 497 aa16.19■□□□□ 0.18
C9orf3-219ENST00000488186 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.19■□□□□ 0.18
C9orf3-219ENST00000488186 SPATA6Q9NWH7 488 aaPredicted RBP16.19■□□□□ 0.18
C9orf3-219ENST00000488186 PLA2G4CQ9UP65 541 aa16.19■□□□□ 0.18
C9orf3-219ENST00000488186 COL4A3Q01955 1670 aa16.18■□□□□ 0.18
C9orf3-219ENST00000488186 MACROD2A1Z1Q3 448 aa16.18■□□□□ 0.18
C9orf3-219ENST00000488186 H3BRJ5 948 aa16.18■□□□□ 0.18
C9orf3-219ENST00000488186 GALR2O43603 387 aaPredicted RBP16.18■□□□□ 0.18
C9orf3-219ENST00000488186 KRT86O43790 486 aa16.18■□□□□ 0.18
C9orf3-219ENST00000488186 BUB1BO60566 1050 aaPredicted RBP16.18■□□□□ 0.18
C9orf3-219ENST00000488186 RARAP10276 462 aa16.18■□□□□ 0.18
C9orf3-219ENST00000488186 TCF4P15884 667 aa16.18■□□□□ 0.18
C9orf3-219ENST00000488186 COMTP21964 271 aa16.18■□□□□ 0.18
C9orf3-219ENST00000488186 IL1R2P27930 398 aa16.18■□□□□ 0.18
C9orf3-219ENST00000488186 CD70P32970 193 aa16.18■□□□□ 0.18
C9orf3-219ENST00000488186 IRAK1P51617 712 aa16.18■□□□□ 0.18
C9orf3-219ENST00000488186 MRPS21P82921 87 aaKnown RBP16.18■□□□□ 0.18
C9orf3-219ENST00000488186 CCZ1BP86790 482 aa16.18■□□□□ 0.18
C9orf3-219ENST00000488186 CCZ1P86791 482 aaPredicted RBP16.18■□□□□ 0.18
C9orf3-219ENST00000488186 MESP2Q0VG99 397 aa16.18■□□□□ 0.18
C9orf3-219ENST00000488186 DMC1Q14565 340 aa16.18■□□□□ 0.18
C9orf3-219ENST00000488186 EIF4HQ15056 248 aaKnown RBP16.18■□□□□ 0.18
C9orf3-219ENST00000488186 CA9Q16790 459 aa16.18■□□□□ 0.18
C9orf3-219ENST00000488186 FSCBQ5H9T9 825 aa16.18■□□□□ 0.18
C9orf3-219ENST00000488186 RNF219Q5W0B1 726 aaPredicted RBP16.18■□□□□ 0.18
C9orf3-219ENST00000488186 SETD3Q86TU7 594 aaPredicted RBP16.18■□□□□ 0.18
C9orf3-219ENST00000488186 MAP7D3Q8IWC1 876 aa16.18■□□□□ 0.18
C9orf3-219ENST00000488186 ZNF513Q8N8E2 541 aaPredicted RBP16.18■□□□□ 0.18
C9orf3-219ENST00000488186 RPLP0P6Q8NHW5 317 aa16.18■□□□□ 0.18
C9orf3-219ENST00000488186 WFDC5Q8TCV5 224 aa16.18■□□□□ 0.18
C9orf3-219ENST00000488186 KCNV2Q8TDN2 545 aa16.18■□□□□ 0.18
C9orf3-219ENST00000488186 PDLIM2Q96JY6 352 aa16.18■□□□□ 0.18
C9orf3-219ENST00000488186 KCTD15Q96SI1 283 aaPredicted RBP16.18■□□□□ 0.18
C9orf3-219ENST00000488186 ELOVL2Q9NXB9 296 aa16.18■□□□□ 0.18
C9orf3-219ENST00000488186 VPS28Q9UK41 221 aa16.18■□□□□ 0.18
C9orf3-219ENST00000488186 ALG6Q9Y672 507 aa16.18■□□□□ 0.18
C9orf3-219ENST00000488186 DUSP10Q9Y6W6 482 aa16.18■□□□□ 0.18
C9orf3-219ENST00000488186 WDFY4Q6ZS81 3184 aa16.18■□□□□ 0.18
C9orf3-219ENST00000488186 PRRT4C9JH25 899 aa16.17■□□□□ 0.18
C9orf3-219ENST00000488186 FGF10O15520 208 aaPredicted RBP16.17■□□□□ 0.18
C9orf3-219ENST00000488186 CSKP41240 450 aa16.17■□□□□ 0.18
C9orf3-219ENST00000488186 MAPKAPK2P49137 400 aa16.17■□□□□ 0.18
C9orf3-219ENST00000488186 CDH6P55285 790 aa16.17■□□□□ 0.18
C9orf3-219ENST00000488186 ST8SIA6P61647 398 aa16.17■□□□□ 0.18
C9orf3-219ENST00000488186 SLC25A11Q02978 314 aaKnown RBP16.17■□□□□ 0.18
C9orf3-219ENST00000488186 EMC10Q5UCC4 262 aa16.17■□□□□ 0.18
C9orf3-219ENST00000488186 MBLAC2Q68D91 279 aa16.17■□□□□ 0.18
C9orf3-219ENST00000488186 RNF43Q68DV7 783 aa16.17■□□□□ 0.18
C9orf3-219ENST00000488186 ZNF354CQ86Y25 554 aa16.17■□□□□ 0.18
C9orf3-219ENST00000488186 SFTPA1Q8IWL2 248 aa16.17■□□□□ 0.18
C9orf3-219ENST00000488186 RHOT1Q8IXI2 618 aa16.17■□□□□ 0.18
C9orf3-219ENST00000488186 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms