RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 EZH2Q15910 746 aaKnown RBP4.29□□□□□ -1.72
ECHDC1-217ENST00000488087 SUPT20HL1Q3ZLR7 823 aa4.29□□□□□ -1.72
ECHDC1-217ENST00000488087 SLC9C1Q4G0N8 1177 aa4.29□□□□□ -1.72
ECHDC1-217ENST00000488087 FBXO47Q5MNV8 452 aa4.29□□□□□ -1.72
ECHDC1-217ENST00000488087 MEX3CQ5U5Q3 659 aaKnown RBP4.29□□□□□ -1.72
ECHDC1-217ENST00000488087 LIPMQ5VYY2 423 aa4.29□□□□□ -1.72
ECHDC1-217ENST00000488087 NEK8Q86SG6 692 aa4.29□□□□□ -1.72
ECHDC1-217ENST00000488087 ADGRF4Q8IZF3 695 aa4.29□□□□□ -1.72
ECHDC1-217ENST00000488087 PTGR2Q8N8N7 351 aaPredicted RBP4.29□□□□□ -1.72
ECHDC1-217ENST00000488087 NTN5Q8WTR8 489 aaPredicted RBP4.29□□□□□ -1.72
ECHDC1-217ENST00000488087 CUL5Q93034 780 aa4.29□□□□□ -1.72
ECHDC1-217ENST00000488087 P2RY11Q96G91 374 aa4.29□□□□□ -1.72
ECHDC1-217ENST00000488087 COG8Q96MW5 612 aa4.29□□□□□ -1.72
ECHDC1-217ENST00000488087 ZNF347Q96SE7 839 aa4.29□□□□□ -1.72
ECHDC1-217ENST00000488087 SCNM1Q9BWG6 230 aa4.29□□□□□ -1.72
ECHDC1-217ENST00000488087 RMI1Q9H9A7 625 aa4.29□□□□□ -1.72
ECHDC1-217ENST00000488087 PLEKHA2Q9HB19 425 aa4.29□□□□□ -1.72
ECHDC1-217ENST00000488087 FRMD4BQ9Y2L6 1034 aa4.29□□□□□ -1.72
ECHDC1-217ENST00000488087 DERAQ9Y315 318 aa4.29□□□□□ -1.72
ECHDC1-217ENST00000488087 STX16-NPEPL1H3BU86 382 aa4.28□□□□□ -1.72
ECHDC1-217ENST00000488087 EIF3FO00303 357 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-217ENST00000488087 STX16O14662 325 aa4.28□□□□□ -1.72
ECHDC1-217ENST00000488087 CELA2AP08217 269 aa4.28□□□□□ -1.72
ECHDC1-217ENST00000488087 CHN1P15882 459 aa4.28□□□□□ -1.72
ECHDC1-217ENST00000488087 TFEBP19484 476 aa4.28□□□□□ -1.72
ECHDC1-217ENST00000488087 KELP23276 732 aa4.28□□□□□ -1.72
ECHDC1-217ENST00000488087 ATP5F1P24539 256 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-217ENST00000488087 HOXA7P31268 230 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-217ENST00000488087 MAPK9P45984 424 aa4.28□□□□□ -1.72
ECHDC1-217ENST00000488087 CPA2P48052 419 aa4.28□□□□□ -1.72
ECHDC1-217ENST00000488087 RPS13P62277 151 aaKnown RBP4.28□□□□□ -1.72
ECHDC1-217ENST00000488087 ZNF91Q05481 1191 aa4.28□□□□□ -1.72
ECHDC1-217ENST00000488087 ALFQ53S48 1182 aa4.28□□□□□ -1.72
ECHDC1-217ENST00000488087 ZNF474Q6S9Z5 364 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-217ENST00000488087 ENDOVQ8N8Q3 282 aaKnown RBP4.28□□□□□ -1.72
ECHDC1-217ENST00000488087 FAM47BQ8NA70 645 aa4.28□□□□□ -1.72
ECHDC1-217ENST00000488087 ZFPM2Q8WW38 1151 aa4.28□□□□□ -1.72
ECHDC1-217ENST00000488087 KTI12Q96EK9 354 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-217ENST00000488087 RBM17Q96I25 401 aaKnown RBP4.28□□□□□ -1.72
ECHDC1-217ENST00000488087 ADAD1Q96M93 576 aaKnown RBP4.28□□□□□ -1.72
ECHDC1-217ENST00000488087 NAP1L4Q99733 375 aaKnown RBP4.28□□□□□ -1.72
ECHDC1-217ENST00000488087 GATA5Q9BWX5 397 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-217ENST00000488087 TRIM31Q9BZY9 425 aa4.28□□□□□ -1.72
ECHDC1-217ENST00000488087 TWSG1Q9GZX9 223 aa4.28□□□□□ -1.72
ECHDC1-217ENST00000488087 NOD2Q9HC29 1040 aa4.28□□□□□ -1.72
ECHDC1-217ENST00000488087 MLXIPLQ9NP71 852 aa4.28□□□□□ -1.72
ECHDC1-217ENST00000488087 MTMR4Q9NYA4 1195 aa4.28□□□□□ -1.72
ECHDC1-217ENST00000488087 LMTK3Q96Q04 1460 aa4.28□□□□□ -1.72
ECHDC1-217ENST00000488087 CYP2D7A0A087X1C5 515 aa4.27□□□□□ -1.73
ECHDC1-217ENST00000488087 C2CD4BA6NLJ0 364 aa4.27□□□□□ -1.73
ECHDC1-217ENST00000488087 SGPL1O95470 568 aa4.27□□□□□ -1.73
ECHDC1-217ENST00000488087 NFATC1O95644 943 aa4.27□□□□□ -1.73
ECHDC1-217ENST00000488087 ABCG1P45844 678 aa4.27□□□□□ -1.73
ECHDC1-217ENST00000488087 SLC12A1Q13621 1099 aa4.27□□□□□ -1.73
ECHDC1-217ENST00000488087 ALKBH1Q13686 389 aaKnown RBP4.27□□□□□ -1.73
ECHDC1-217ENST00000488087 EFR3AQ14156 821 aa4.27□□□□□ -1.73
ECHDC1-217ENST00000488087 DAZAP2Q15038 168 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-217ENST00000488087 CTXN3Q4LDR2 81 aa4.27□□□□□ -1.73
ECHDC1-217ENST00000488087 RUNDC3AQ59EK9 446 aa4.27□□□□□ -1.73
ECHDC1-217ENST00000488087 ARL13AQ5H913 290 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-217ENST00000488087 MTX3Q5HYI7 312 aa4.27□□□□□ -1.73
ECHDC1-217ENST00000488087 ZNF484Q5JVG2 852 aa4.27□□□□□ -1.73
ECHDC1-217ENST00000488087 SLC2A7Q6PXP3 512 aa4.27□□□□□ -1.73
ECHDC1-217ENST00000488087 RASGRP2Q7LDG7 609 aa4.27□□□□□ -1.73
ECHDC1-217ENST00000488087 ANKS1BQ7Z6G8 1248 aa4.27□□□□□ -1.73
ECHDC1-217ENST00000488087 TMEM200AQ86VY9 491 aa4.27□□□□□ -1.73
ECHDC1-217ENST00000488087 VPS52Q8N1B4 723 aa4.27□□□□□ -1.73
ECHDC1-217ENST00000488087 PAF1Q8N7H5 531 aa4.27□□□□□ -1.73
ECHDC1-217ENST00000488087 ANKRD44Q8N8A2 993 aa4.27□□□□□ -1.73
ECHDC1-217ENST00000488087 ARL14EPQ8N8R7 260 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-217ENST00000488087 LINS1Q8NG48 757 aa4.27□□□□□ -1.73
ECHDC1-217ENST00000488087 PRSS3P2Q8NHM4 247 aa4.27□□□□□ -1.73
ECHDC1-217ENST00000488087 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-217ENST00000488087 TBATAQ96M53 351 aa4.27□□□□□ -1.73
ECHDC1-217ENST00000488087 HDHD5Q9BXW7 423 aa4.27□□□□□ -1.73
ECHDC1-217ENST00000488087 ARHGAP39Q9C0H5 1083 aa4.27□□□□□ -1.73
ECHDC1-217ENST00000488087 PRSS22Q9GZN4 317 aa4.27□□□□□ -1.73
ECHDC1-217ENST00000488087 MOV10Q9HCE1 1003 aaKnown RBP4.27□□□□□ -1.73
ECHDC1-217ENST00000488087 ARL15Q9NXU5 204 aa4.27□□□□□ -1.73
ECHDC1-217ENST00000488087 RRN3Q9NYV6 651 aa4.27□□□□□ -1.73
ECHDC1-217ENST00000488087 PGAP2Q9UHJ9 254 aa4.27□□□□□ -1.73
ECHDC1-217ENST00000488087 TNFSF13BQ9Y275 285 aa4.27□□□□□ -1.73
ECHDC1-217ENST00000488087 DPPA5A6NC42 116 aa4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 CGB1A6NKQ9 187 aa4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 MCIDASD6RGH6 385 aa4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 SYN3O14994 580 aa4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 TP73O15350 636 aa4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 CCNT1O60563 726 aaKnown RBP4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 BCAR3O75815 825 aa4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 CSF1P09603 554 aa4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 LYL1P12980 280 aa4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 ACP5P13686 325 aa4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 CPA1P15085 419 aa4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 PAX3P23760 479 aa4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 PRPH2P23942 346 aa4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 GSTM2P28161 218 aa4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 PNPLA4P41247 253 aa4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 OAZ1P54368 228 aa4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 ADPRHP54922 357 aa4.26□□□□□ -1.73
ECHDC1-217ENST00000488087 ID2Q02363 134 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms