RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 ZMYND8Q9ULU4 1186 aaPredicted RBP9.7□□□□□ -0.86
SF3B1-211ENST00000487698 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.69□□□□□ -0.86
SF3B1-211ENST00000487698 LINC01553A4QN01 128 aa9.69□□□□□ -0.86
SF3B1-211ENST00000487698 GOLGA6CA6NDK9 693 aa9.69□□□□□ -0.86
SF3B1-211ENST00000487698 GOLGA6L10A6NI86 522 aa9.69□□□□□ -0.86
SF3B1-211ENST00000487698 DRGXA6NNA5 263 aa9.69□□□□□ -0.86
SF3B1-211ENST00000487698 HMGB1P1B2RPK0 211 aaPredicted RBP9.69□□□□□ -0.86
SF3B1-211ENST00000487698 KCNK1O00180 336 aa9.69□□□□□ -0.86
SF3B1-211ENST00000487698 BANF1O75531 89 aa9.69□□□□□ -0.86
SF3B1-211ENST00000487698 TCEA3O75764 348 aa9.69□□□□□ -0.86
SF3B1-211ENST00000487698 HMBSP08397 361 aa9.69□□□□□ -0.86
SF3B1-211ENST00000487698 GOLGA6DP0CG33 693 aa9.69□□□□□ -0.86
SF3B1-211ENST00000487698 RHOQP17081 205 aa9.69□□□□□ -0.86
SF3B1-211ENST00000487698 CTNNB1P35222 781 aa9.69□□□□□ -0.86
SF3B1-211ENST00000487698 FDFT1P37268 417 aa9.69□□□□□ -0.86
SF3B1-211ENST00000487698 MAGEA3P43357 314 aa9.69□□□□□ -0.86
SF3B1-211ENST00000487698 IRAK1P51617 712 aa9.69□□□□□ -0.86
SF3B1-211ENST00000487698 KCNQ1P51787 676 aa9.69□□□□□ -0.86
SF3B1-211ENST00000487698 ERVFC1P60507 584 aa9.69□□□□□ -0.86
SF3B1-211ENST00000487698 KRT71Q3SY84 523 aa9.69□□□□□ -0.86
SF3B1-211ENST00000487698 AGBL2Q5U5Z8 902 aa9.69□□□□□ -0.86
SF3B1-211ENST00000487698 FBXL22Q6P050 247 aa9.69□□□□□ -0.86
SF3B1-211ENST00000487698 CCDC13Q8IYE1 715 aa9.69□□□□□ -0.86
SF3B1-211ENST00000487698 ZBED8Q8IZ13 594 aa9.69□□□□□ -0.86
SF3B1-211ENST00000487698 PDIK1LQ8N165 341 aa9.69□□□□□ -0.86
SF3B1-211ENST00000487698 UMODL1-AS1Q8N2C9 162 aa9.69□□□□□ -0.86
SF3B1-211ENST00000487698 DOCK6Q96HP0 2047 aa9.69□□□□□ -0.86
SF3B1-211ENST00000487698 SERPINB12Q96P63 405 aa9.69□□□□□ -0.86
SF3B1-211ENST00000487698 KLHL5Q96PQ7 755 aa9.69□□□□□ -0.86
SF3B1-211ENST00000487698 ZYG11BQ9C0D3 744 aa9.69□□□□□ -0.86
SF3B1-211ENST00000487698 NOL6Q9H6R4 1146 aaKnown RBP9.69□□□□□ -0.86
SF3B1-211ENST00000487698 IL21Q9HBE4 155 aa9.69□□□□□ -0.86
SF3B1-211ENST00000487698 ZNF334Q9HCZ1 680 aaPredicted RBP9.69□□□□□ -0.86
SF3B1-211ENST00000487698 EIF2B3Q9NR50 452 aaKnown RBP9.69□□□□□ -0.86
SF3B1-211ENST00000487698 TMEM248Q9NWD8 314 aa9.69□□□□□ -0.86
SF3B1-211ENST00000487698 GOLGA6AQ9NYA3 693 aa9.69□□□□□ -0.86
SF3B1-211ENST00000487698 MPP6Q9NZW5 540 aa9.69□□□□□ -0.86
SF3B1-211ENST00000487698 UXTQ9UBK9 157 aaPredicted RBP9.69□□□□□ -0.86
SF3B1-211ENST00000487698 MYO7AQ13402 2215 aa9.69□□□□□ -0.86
SF3B1-211ENST00000487698 CLUHO75153 1309 aa9.69□□□□□ -0.86
SF3B1-211ENST00000487698 CEP290O15078 2479 aa9.69□□□□□ -0.86
SF3B1-211ENST00000487698 C5orf67F2Z3F1 127 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 CXCL14O95715 111 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 F11P03951 625 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 ADH1AP07327 375 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 APRTP07741 180 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 DNAJB1P25685 340 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 COG7P83436 770 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 ZBTB17Q13105 803 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 C5orf22Q49AR2 442 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 ALFQ53S48 1182 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 SYCP2LQ5T4T6 812 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 RAP1GAP2Q684P5 730 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 TMC7Q7Z402 723 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 CROCCP2Q86T23 111 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 ITIH5Q86UX2 942 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 CAND1Q86VP6 1230 aaKnown RBP9.68□□□□□ -0.86
SF3B1-211ENST00000487698 AGGF1Q8N302 714 aaeCLIP9.68□□□□□ -0.86
SF3B1-211ENST00000487698 UHMK1Q8TAS1 419 aaKnown RBP9.68□□□□□ -0.86
SF3B1-211ENST00000487698 DEPDC1BQ8WUY9 529 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 IGSF8Q969P0 613 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 PLD4Q96BZ4 506 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 PGM2Q96G03 612 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 VAT1Q99536 393 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 TCF25Q9BQ70 676 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 GORASP1Q9BQQ3 440 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 HTATIP2Q9BUP3 242 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 CEP41Q9BYV8 373 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 ROPN1BQ9BZX4 212 aaPredicted RBP9.68□□□□□ -0.86
SF3B1-211ENST00000487698 MTIF3Q9H2K0 278 aaKnown RBP9.68□□□□□ -0.86
SF3B1-211ENST00000487698 ROPN1Q9HAT0 212 aaPredicted RBP9.68□□□□□ -0.86
SF3B1-211ENST00000487698 ALG13Q9NP73 1137 aaKnown RBP9.68□□□□□ -0.86
SF3B1-211ENST00000487698 RWDD3Q9Y3V2 267 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 ASB3Q9Y575 518 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 C2orf78A6NCI8 922 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 C2orf71A6NGG8 1288 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 MAFKO60675 156 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 CNTN5O94779 1100 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 ARHGEF15O94989 841 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 OLFM2O95897 454 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 SPATA31D3P0C874 917 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 TACR2P21452 398 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 CCNCP24863 283 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 PSMB4P28070 264 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 GYS2P54840 703 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 GPX6P59796 221 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 IFI35P80217 286 aaPredicted RBP9.68□□□□□ -0.86
SF3B1-211ENST00000487698 CDK16Q00536 496 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 TAF12Q16514 161 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 PARP6Q2NL67 630 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 FAM133BQ5BKY9 247 aaKnown RBP9.68□□□□□ -0.86
SF3B1-211ENST00000487698 TNFAIP8L3Q5GJ75 292 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 KCTD16Q68DU8 428 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 LRRC31Q6UY01 552 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 ARHGAP36Q6ZRI8 547 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 SPATA31D4Q6ZUB0 917 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 LRRC49Q8IUZ0 686 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 SH2D3CQ8N5H7 860 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 ATPAF2Q8N5M1 289 aa9.68□□□□□ -0.86
SF3B1-211ENST00000487698 SPPL3Q8TCT6 385 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms