RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 SERPINB11Q96P15 392 aa8.86□□□□□ -0.99
PRKCB-208ENST00000487674 TRIM62Q9BVG3 475 aa8.86□□□□□ -0.99
PRKCB-208ENST00000487674 RSPH9Q9H1X1 276 aaPredicted RBP8.86□□□□□ -0.99
PRKCB-208ENST00000487674 PABPC3Q9H361 631 aaKnown RBP8.86□□□□□ -0.99
PRKCB-208ENST00000487674 KIAA1522Q9P206 1035 aaPredicted RBP8.86□□□□□ -0.99
PRKCB-208ENST00000487674 SUN2Q9UH99 717 aa8.86□□□□□ -0.99
PRKCB-208ENST00000487674 SCML1Q9UN30 329 aa8.86□□□□□ -0.99
PRKCB-208ENST00000487674 TLR6Q9Y2C9 796 aa8.86□□□□□ -0.99
PRKCB-208ENST00000487674 SNX11Q9Y5W9 270 aa8.86□□□□□ -0.99
PRKCB-208ENST00000487674 PLXNA2O75051 1894 aa8.85□□□□□ -0.99
PRKCB-208ENST00000487674 COL5A1P20908 1838 aaPredicted RBP8.85□□□□□ -0.99
PRKCB-208ENST00000487674 GOLGA6L7A0A1B0GV03 622 aa8.85□□□□□ -0.99
PRKCB-208ENST00000487674 RNF225M0QZC1 329 aaPredicted RBP8.85□□□□□ -0.99
PRKCB-208ENST00000487674 TAF4O00268 1085 aa8.85□□□□□ -0.99
PRKCB-208ENST00000487674 PCDHGA12O60330 932 aa8.85□□□□□ -0.99
PRKCB-208ENST00000487674 FSBPO95073 299 aa8.85□□□□□ -0.99
PRKCB-208ENST00000487674 CSKP41240 450 aa8.85□□□□□ -0.99
PRKCB-208ENST00000487674 GRK6P43250 576 aa8.85□□□□□ -0.99
PRKCB-208ENST00000487674 RPL34P49207 117 aaKnown RBP8.85□□□□□ -0.99
PRKCB-208ENST00000487674 CCT8P50990 548 aa8.85□□□□□ -0.99
PRKCB-208ENST00000487674 RPS24P62847 133 aaKnown RBP8.85□□□□□ -0.99
PRKCB-208ENST00000487674 ARID5BQ14865 1188 aa8.85□□□□□ -0.99
PRKCB-208ENST00000487674 MEA1Q16626 185 aa8.85□□□□□ -0.99
PRKCB-208ENST00000487674 HNRNPA1L2Q32P51 320 aaKnown RBP8.85□□□□□ -0.99
PRKCB-208ENST00000487674 INAVAQ3KP66 663 aa8.85□□□□□ -0.99
PRKCB-208ENST00000487674 KIAA0895LQ68EN5 471 aa8.85□□□□□ -0.99
PRKCB-208ENST00000487674 TTI2Q6NXR4 508 aa8.85□□□□□ -0.99
PRKCB-208ENST00000487674 BEND5Q7L4P6 421 aa8.85□□□□□ -0.99
PRKCB-208ENST00000487674 CCDC117Q8IWD4 279 aaPredicted RBP8.85□□□□□ -0.99
PRKCB-208ENST00000487674 KDM1BQ8NB78 822 aa8.85□□□□□ -0.99
PRKCB-208ENST00000487674 LMO3Q8TAP4 145 aa8.85□□□□□ -0.99
PRKCB-208ENST00000487674 DQX1Q8TE96 717 aaKnown RBP8.85□□□□□ -0.99
PRKCB-208ENST00000487674 RHBDD1Q8TEB9 315 aa8.85□□□□□ -0.99
PRKCB-208ENST00000487674 ERCC4Q92889 916 aaPredicted RBP8.85□□□□□ -0.99
PRKCB-208ENST00000487674 TTC17Q96AE7 1141 aa8.85□□□□□ -0.99
PRKCB-208ENST00000487674 MYO19Q96H55 970 aa8.85□□□□□ -0.99
PRKCB-208ENST00000487674 ORAI3Q9BRQ5 295 aa8.85□□□□□ -0.99
PRKCB-208ENST00000487674 MIS12Q9H081 205 aa8.85□□□□□ -0.99
PRKCB-208ENST00000487674 CCDC86Q9H6F5 360 aaKnown RBP8.85□□□□□ -0.99
PRKCB-208ENST00000487674 TOR4AQ9NXH8 423 aa8.85□□□□□ -0.99
PRKCB-208ENST00000487674 STIM2Q9P246 746 aa8.85□□□□□ -0.99
PRKCB-208ENST00000487674 NCKAP1Q9Y2A7 1128 aa8.85□□□□□ -0.99
PRKCB-208ENST00000487674 ANKRD6Q9Y2G4 727 aa8.85□□□□□ -0.99
PRKCB-208ENST00000487674 BAHCC1Q9P281 2608 aa8.85□□□□□ -0.99
PRKCB-208ENST00000487674 DSPP15924 2871 aaKnown RBP8.85□□□□□ -0.99
PRKCB-208ENST00000487674 DMXL2Q8TDJ6 3036 aa8.85□□□□□ -0.99
PRKCB-208ENST00000487674 ITIH6Q6UXX5 1313 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 FREM2Q5SZK8 3169 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 ADAMTS20P59510 1910 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 BICDL2A1A5D9 508 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 PAPSS1O43252 624 aaPredicted RBP8.84□□□□□ -0.99
PRKCB-208ENST00000487674 TNFSF14O43557 240 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 DFNA5O60443 496 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 RNASEH1O60930 286 aaKnown RBP8.84□□□□□ -0.99
PRKCB-208ENST00000487674 SIN3BO75182 1162 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 LUC7L3O95232 432 aaKnown RBP8.84□□□□□ -0.99
PRKCB-208ENST00000487674 MOCS3O95396 460 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 CALCAP01258 141 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 APOEP02649 317 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 FYNP06241 537 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 IGHV4-34P06331 123 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 SRPRAP08240 638 aaKnown RBP8.84□□□□□ -0.99
PRKCB-208ENST00000487674 ATXN1LP0C7T5 689 aaKnown RBP8.84□□□□□ -0.99
PRKCB-208ENST00000487674 CTSKP43235 329 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 ACADSBP45954 432 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 RACK1P63244 317 aaKnown RBP8.84□□□□□ -0.99
PRKCB-208ENST00000487674 SFSWAPQ12872 951 aaKnown RBP8.84□□□□□ -0.99
PRKCB-208ENST00000487674 CST6Q15828 149 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 MS4A13Q5J8X5 152 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 PITRM1Q5JRX3 1037 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 LRSAM1Q6UWE0 723 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 LAYNQ6UX15 382 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 RRAGAQ7L523 313 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 TMPRSS7Q7RTY8 843 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 ADAT2Q7Z6V5 191 aaKnown RBP8.84□□□□□ -0.99
PRKCB-208ENST00000487674 TAC4Q86UU9 113 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 ARHGEF19Q8IW93 802 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 DHX40Q8IX18 779 aaKnown RBP8.84□□□□□ -0.99
PRKCB-208ENST00000487674 ELOA2Q8IYF1 753 aaPredicted RBP8.84□□□□□ -0.99
PRKCB-208ENST00000487674 CARNMT1Q8N4J0 409 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 GANCQ8TET4 914 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 STK32AQ8WU08 396 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 FAM149B1Q96BN6 582 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 MYEOVQ96EZ4 313 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 SLC39A13Q96H72 371 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 MRGPRX3Q96LB0 322 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 ACE2Q9BYF1 805 aaPredicted RBP8.84□□□□□ -0.99
PRKCB-208ENST00000487674 NUCKS1Q9H1E3 243 aaKnown RBP8.84□□□□□ -0.99
PRKCB-208ENST00000487674 MTG2Q9H4K7 406 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 ST7Q9NRC1 585 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 FBXL12Q9NXK8 326 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 SERGEFQ9UGK8 458 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 MAN1B1Q9UKM7 699 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 INTS6Q9UL03 887 aaKnown RBP8.84□□□□□ -0.99
PRKCB-208ENST00000487674 FZD4Q9ULV1 537 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 CNTN6Q9UQ52 1028 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 BTBD3Q9Y2F9 522 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 GPSM3Q9Y4H4 160 aa8.84□□□□□ -0.99
PRKCB-208ENST00000487674 ITPR1Q14643 2758 aa8.84□□□□□ -1
PRKCB-208ENST00000487674 EDDM13A0A1B0GTR0 161 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms