RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 COX16Q9P0S2 106 aa19.71■□□□□ 0.75
CLIP2-206ENST00000487091 TARSL2A2RTX5 802 aaKnown RBP19.7■□□□□ 0.74
CLIP2-206ENST00000487091 F8VZ95 297 aa19.7■□□□□ 0.74
CLIP2-206ENST00000487091 GOLGA6L22H0YM25 854 aa19.7■□□□□ 0.74
CLIP2-206ENST00000487091 M0QYT0 321 aa19.7■□□□□ 0.74
CLIP2-206ENST00000487091 LSM8O95777 96 aaKnown RBP19.7■□□□□ 0.74
CLIP2-206ENST00000487091 ACSL1P33121 698 aa19.7■□□□□ 0.74
CLIP2-206ENST00000487091 PLK1P53350 603 aa19.7■□□□□ 0.74
CLIP2-206ENST00000487091 NME3Q13232 169 aa19.7■□□□□ 0.74
CLIP2-206ENST00000487091 AUHQ13825 339 aaKnown RBP19.7■□□□□ 0.74
CLIP2-206ENST00000487091 KRT31Q15323 416 aa19.7■□□□□ 0.74
CLIP2-206ENST00000487091 FBXL22Q6P050 247 aa19.7■□□□□ 0.74
CLIP2-206ENST00000487091 FAM124AQ86V42 546 aa19.7■□□□□ 0.74
CLIP2-206ENST00000487091 ERICH1Q86X53 443 aa19.7■□□□□ 0.74
CLIP2-206ENST00000487091 APCDD1Q8J025 514 aa19.7■□□□□ 0.74
CLIP2-206ENST00000487091 CCAR2Q8N163 923 aaKnown RBP19.7■□□□□ 0.74
CLIP2-206ENST00000487091 NT5C3BQ969T7 300 aa19.7■□□□□ 0.74
CLIP2-206ENST00000487091 PGAP3Q96FM1 320 aaPredicted RBP19.7■□□□□ 0.74
CLIP2-206ENST00000487091 CNTNAP3BQ96NU0 1288 aa19.7■□□□□ 0.74
CLIP2-206ENST00000487091 PPP1R9BQ96SB3 815 aa19.7■□□□□ 0.74
CLIP2-206ENST00000487091 CNTNAP3Q9BZ76 1288 aa19.7■□□□□ 0.74
CLIP2-206ENST00000487091 BTBD1Q9H0C5 482 aa19.7■□□□□ 0.74
CLIP2-206ENST00000487091 VPS16Q9H269 839 aa19.7■□□□□ 0.74
CLIP2-206ENST00000487091 SLC32A1Q9H598 525 aa19.7■□□□□ 0.74
CLIP2-206ENST00000487091 DNAAF2Q9NVR5 837 aaKnown RBP19.7■□□□□ 0.74
CLIP2-206ENST00000487091 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.7■□□□□ 0.74
CLIP2-206ENST00000487091 ANGPTL2Q9UKU9 493 aa19.7■□□□□ 0.74
CLIP2-206ENST00000487091 STAP1Q9ULZ2 295 aa19.7■□□□□ 0.74
CLIP2-206ENST00000487091 ITIH6Q6UXX5 1313 aa19.7■□□□□ 0.74
CLIP2-206ENST00000487091 RNASEH1O60930 286 aaKnown RBP19.69■□□□□ 0.74
CLIP2-206ENST00000487091 SIN3BO75182 1162 aa19.69■□□□□ 0.74
CLIP2-206ENST00000487091 F9P00740 461 aa19.69■□□□□ 0.74
CLIP2-206ENST00000487091 CTSOP43234 321 aaPredicted RBP19.69■□□□□ 0.74
CLIP2-206ENST00000487091 SULT2A1Q06520 285 aa19.69■□□□□ 0.74
CLIP2-206ENST00000487091 SFSWAPQ12872 951 aaKnown RBP19.69■□□□□ 0.74
CLIP2-206ENST00000487091 C5orf22Q49AR2 442 aa19.69■□□□□ 0.74
CLIP2-206ENST00000487091 BRMS1LQ5PSV4 323 aa19.69■□□□□ 0.74
CLIP2-206ENST00000487091 C9orf64Q5T6V5 341 aa19.69■□□□□ 0.74
CLIP2-206ENST00000487091 RNF219Q5W0B1 726 aaPredicted RBP19.69■□□□□ 0.74
CLIP2-206ENST00000487091 SASS6Q6UVJ0 657 aa19.69■□□□□ 0.74
CLIP2-206ENST00000487091 USP30Q70CQ3 517 aa19.69■□□□□ 0.74
CLIP2-206ENST00000487091 PIP4P1Q86T03 277 aa19.69■□□□□ 0.74
CLIP2-206ENST00000487091 NOP9Q86U38 636 aaKnown RBP19.69■□□□□ 0.74
CLIP2-206ENST00000487091 MSANTD4Q8NCY6 345 aa19.69■□□□□ 0.74
CLIP2-206ENST00000487091 C1orf216Q8TAB5 229 aa19.69■□□□□ 0.74
CLIP2-206ENST00000487091 RPRD1AQ96P16 312 aaPredicted RBP19.69■□□□□ 0.74
CLIP2-206ENST00000487091 MIR1-1HGQ9H1L0 117 aa19.69■□□□□ 0.74
CLIP2-206ENST00000487091 GANQ9H2C0 597 aa19.69■□□□□ 0.74
CLIP2-206ENST00000487091 MTG2Q9H4K7 406 aa19.69■□□□□ 0.74
CLIP2-206ENST00000487091 SGK2Q9HBY8 427 aa19.69■□□□□ 0.74
CLIP2-206ENST00000487091 ANO10Q9NW15 660 aa19.69■□□□□ 0.74
CLIP2-206ENST00000487091 DAAM1Q9Y4D1 1078 aa19.69■□□□□ 0.74
CLIP2-206ENST00000487091 EDDM13A0A1B0GTR0 161 aa19.68■□□□□ 0.74
CLIP2-206ENST00000487091 BCAT2O15382 392 aaPredicted RBP19.68■□□□□ 0.74
CLIP2-206ENST00000487091 SEMA4FO95754 770 aa19.68■□□□□ 0.74
CLIP2-206ENST00000487091 NNMTP40261 264 aa19.68■□□□□ 0.74
CLIP2-206ENST00000487091 CXCR3P49682 368 aa19.68■□□□□ 0.74
CLIP2-206ENST00000487091 VASPP50552 380 aaPredicted RBP19.68■□□□□ 0.74
CLIP2-206ENST00000487091 RNASE9P60153 205 aaKnown RBP19.68■□□□□ 0.74
CLIP2-206ENST00000487091 ZNF252P-AS1Q0IIN9 211 aa19.68■□□□□ 0.74
CLIP2-206ENST00000487091 SLC14A1Q13336 389 aa19.68■□□□□ 0.74
CLIP2-206ENST00000487091 FKBP15Q5T1M5 1219 aa19.68■□□□□ 0.74
CLIP2-206ENST00000487091 OTUD1Q5VV17 481 aaPredicted RBP19.68■□□□□ 0.74
CLIP2-206ENST00000487091 TAF3Q5VWG9 929 aa19.68■□□□□ 0.74
CLIP2-206ENST00000487091 CXorf57Q6NSI4 855 aaKnown RBP19.68■□□□□ 0.74
CLIP2-206ENST00000487091 ZNF677Q86XU0 584 aa19.68■□□□□ 0.74
CLIP2-206ENST00000487091 XYLT1Q86Y38 959 aa19.68■□□□□ 0.74
CLIP2-206ENST00000487091 DHX40Q8IX18 779 aaKnown RBP19.68■□□□□ 0.74
CLIP2-206ENST00000487091 ZCCHC9Q8N567 271 aaKnown RBP19.68■□□□□ 0.74
CLIP2-206ENST00000487091 DEFB124Q8NES8 71 aa19.68■□□□□ 0.74
CLIP2-206ENST00000487091 EPS8L1Q8TE68 723 aa19.68■□□□□ 0.74
CLIP2-206ENST00000487091 IGSF8Q969P0 613 aa19.68■□□□□ 0.74
CLIP2-206ENST00000487091 PABPC3Q9H361 631 aaKnown RBP19.68■□□□□ 0.74
CLIP2-206ENST00000487091 C6orf106Q9H6K1 298 aaPredicted RBP19.68■□□□□ 0.74
CLIP2-206ENST00000487091 WDCPQ9H6R7 721 aa19.68■□□□□ 0.74
CLIP2-206ENST00000487091 PIGVQ9NUD9 493 aa19.68■□□□□ 0.74
CLIP2-206ENST00000487091 FANCLQ9NW38 375 aa19.68■□□□□ 0.74
CLIP2-206ENST00000487091 ARHGEF38Q9NXL2 777 aa19.68■□□□□ 0.74
CLIP2-206ENST00000487091 EIF2B4Q9UI10 523 aaKnown RBP19.68■□□□□ 0.74
CLIP2-206ENST00000487091 SLCO3A1Q9UIG8 710 aa19.68■□□□□ 0.74
CLIP2-206ENST00000487091 NCKAP1Q9Y2A7 1128 aa19.68■□□□□ 0.74
CLIP2-206ENST00000487091 HS3ST4Q9Y661 456 aa19.68■□□□□ 0.74
CLIP2-206ENST00000487091 KNL1Q8NG31 2342 aa19.67■□□□□ 0.74
CLIP2-206ENST00000487091 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.67■□□□□ 0.74
CLIP2-206ENST00000487091 TTC34A8MYJ7 566 aa19.67■□□□□ 0.74
CLIP2-206ENST00000487091 PAGE1O75459 146 aa19.67■□□□□ 0.74
CLIP2-206ENST00000487091 GJB3O75712 270 aa19.67■□□□□ 0.74
CLIP2-206ENST00000487091 PDGFRAP16234 1089 aa19.67■□□□□ 0.74
CLIP2-206ENST00000487091 MZF1P28698 734 aaPredicted RBP19.67■□□□□ 0.74
CLIP2-206ENST00000487091 NOMO3P69849 1222 aa19.67■□□□□ 0.74
CLIP2-206ENST00000487091 GRIK2Q13002 908 aa19.67■□□□□ 0.74
CLIP2-206ENST00000487091 ZNF177Q13360 481 aaPredicted RBP19.67■□□□□ 0.74
CLIP2-206ENST00000487091 SLC25A52Q3SY17 297 aa19.67■□□□□ 0.74
CLIP2-206ENST00000487091 ACBD5Q5T8D3 534 aaPredicted RBP19.67■□□□□ 0.74
CLIP2-206ENST00000487091 FAM102AQ5T9C2 384 aaPredicted RBP19.67■□□□□ 0.74
CLIP2-206ENST00000487091 SND1Q7KZF4 910 aaKnown RBP eCLIP19.67■□□□□ 0.74
CLIP2-206ENST00000487091 CIR1Q86X95 450 aaPredicted RBP19.67■□□□□ 0.74
CLIP2-206ENST00000487091 RPL10LQ96L21 214 aaKnown RBP19.67■□□□□ 0.74
CLIP2-206ENST00000487091 ADAM33Q9BZ11 813 aa19.67■□□□□ 0.74
CLIP2-206ENST00000487091 OSGEPQ9NPF4 335 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms