RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	MTA2	O94776	668 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	MOCS3	O95396	460 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	C1QTNF9	P0C862	333 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	ADH5	P11766	374 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	DES	P17661	470 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	TIE1	P35590	1138 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	DHPS	P49366	369 aa	Predicted RBP	13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	SHC2	P98077	582 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	ATP11A	P98196	1134 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	OGDH	Q02218	1023 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	KDSR	Q06136	332 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	EFEMP1	Q12805	493 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	MESD	Q14696	234 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	TCEAL1	Q15170	157 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	IFI16	Q16666	785 aa	Known RBP	13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	CDO1	Q16878	200 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	HSF5	Q4G112	596 aa	Predicted RBP	13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	PMS2CL	Q68D20	193 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	ZNF662	Q6ZS27	426 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	BEND5	Q7L4P6	421 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	ARMCX6	Q7L4S7	300 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	ARC	Q7LC44	396 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	TMEM25	Q86YD3	366 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	ALLC	Q8N6M5	410 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	ADAM32	Q8TC27	787 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	KIAA1524	Q8TCG1	905 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	DQX1	Q8TE96	717 aa	Known RBP	13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	PNKP	Q96T60	521 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	TBCB	Q99426	244 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	CNPY3	Q9BT09	278 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	FAM204A	Q9H8W3	233 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	OLA1	Q9NTK5	396 aa	Known RBP	13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	COX16	Q9P0S2	106 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	IP6K2	Q9UHH9	426 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	RASAL2	Q9UJF2	1139 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	DNMT3L	Q9UJW3	386 aa		13.54	□□□□□ -0.24
NR1H3-223	ENST00000486991	MUC22	E2RYF6	1773 aa	Predicted RBP	13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	TNRC6B	Q9UPQ9	1833 aa	Known RBP	13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991		A0A0A0MRY4	1105 aa		13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	GOLGA6L9	A6NEM1	432 aa		13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991		M0QYT0	321 aa		13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	SGK1	O00141	431 aa		13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	CDX4	O14627	284 aa	Predicted RBP	13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	KLF8	O95600	359 aa	Predicted RBP	13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	APOD	P05090	189 aa		13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	TFE3	P19532	575 aa	Predicted RBP	13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	PI4KA	P42356	2102 aa		13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	ZNF143	P52747	638 aa	Predicted RBP	13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	HADHB	P55084	474 aa	Known RBP	13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	PITX1	P78337	314 aa	Predicted RBP	13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	IRX4	P78413	519 aa		13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	ZNF252P-AS1	Q0IIN9	211 aa		13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	FOXC1	Q12948	553 aa		13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	NME3	Q13232	169 aa		13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	C15orf59	Q2T9L4	293 aa	Predicted RBP	13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	SLC25A52	Q3SY17	297 aa		13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	CCDC14	Q49A88	953 aa		13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	USP39	Q53GS9	565 aa	Known RBP	13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	SH3PXD2A	Q5TCZ1	1133 aa		13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	MSANTD2	Q6P1R3	559 aa		13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	TAC4	Q86UU9	113 aa		13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	RASSF3	Q86WH2	238 aa		13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	MIB1	Q86YT6	1006 aa		13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	TXNDC5	Q8NBS9	432 aa	Known RBP	13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	TPCN2	Q8NHX9	752 aa		13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	PIGK	Q92643	395 aa		13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	ERLEC1	Q96DZ1	483 aa		13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	FSCN3	Q9NQT6	498 aa		13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	SPHK2	Q9NRA0	654 aa		13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	DDIT4	Q9NX09	232 aa		13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	RRN3	Q9NYV6	651 aa		13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	MARK1	Q9P0L2	795 aa		13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	SFMBT1	Q9UHJ3	866 aa		13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	HCN2	Q9UL51	889 aa		13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	MMP17	Q9ULZ9	603 aa		13.53	□□□□□ -0.24
NR1H3-223	ENST00000486991	CEP192	Q8TEP8	1941 aa		13.52	□□□□□ -0.24
NR1H3-223	ENST00000486991	WDFY3	Q8IZQ1	3526 aa		13.52	□□□□□ -0.25
NR1H3-223	ENST00000486991	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		13.52	□□□□□ -0.25
NR1H3-223	ENST00000486991	TRIM24	O15164	1050 aa		13.52	□□□□□ -0.25
NR1H3-223	ENST00000486991	BUB1B	O60566	1050 aa	Predicted RBP	13.52	□□□□□ -0.25
NR1H3-223	ENST00000486991	PROSC	O94903	275 aa		13.52	□□□□□ -0.25
NR1H3-223	ENST00000486991	TRUB2	O95900	331 aa	Known RBP	13.52	□□□□□ -0.25
NR1H3-223	ENST00000486991	GRIA2	P42262	883 aa		13.52	□□□□□ -0.25
NR1H3-223	ENST00000486991	SSR1	P43307	286 aa	Known RBP	13.52	□□□□□ -0.25
NR1H3-223	ENST00000486991	PTPN9	P43378	593 aa		13.52	□□□□□ -0.25
NR1H3-223	ENST00000486991	KIR2DL1	P43626	348 aa	Predicted RBP	13.52	□□□□□ -0.25
NR1H3-223	ENST00000486991	MRPS21	P82921	87 aa	Known RBP	13.52	□□□□□ -0.25
NR1H3-223	ENST00000486991	COG7	P83436	770 aa		13.52	□□□□□ -0.25
NR1H3-223	ENST00000486991	DEUP1	Q05D60	604 aa		13.52	□□□□□ -0.25
NR1H3-223	ENST00000486991	PIGH	Q14442	188 aa	Predicted RBP	13.52	□□□□□ -0.25
NR1H3-223	ENST00000486991	CRY1	Q16526	586 aa		13.52	□□□□□ -0.25
NR1H3-223	ENST00000486991	UAP1L1	Q3KQV9	507 aa		13.52	□□□□□ -0.25
NR1H3-223	ENST00000486991	CYP2U1	Q7Z449	544 aa		13.52	□□□□□ -0.25
NR1H3-223	ENST00000486991	DAAM2	Q86T65	1068 aa		13.52	□□□□□ -0.25
NR1H3-223	ENST00000486991	TMEFF1	Q8IYR6	380 aa		13.52	□□□□□ -0.25
NR1H3-223	ENST00000486991	RNF10	Q8N5U6	811 aa	Known RBP	13.52	□□□□□ -0.25
NR1H3-223	ENST00000486991	DEFB119	Q8N690	84 aa		13.52	□□□□□ -0.25
NR1H3-223	ENST00000486991	NAT16	Q8N8M0	369 aa		13.52	□□□□□ -0.25
NR1H3-223	ENST00000486991	IL17RC	Q8NAC3	791 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms