RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 ALYREFQ86V81 257 aaKnown RBP18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 LPPQ93052 612 aa18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 ATP2A3Q93084 1043 aa18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 CERS2Q96G23 380 aa18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 SMARCD1Q96GM5 515 aa18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 C20orf27Q9GZN8 174 aa18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 NMUR2Q9GZQ4 415 aa18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 THAP1Q9NVV9 213 aa18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 ZFATQ9P243 1243 aa18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 DCDC2Q9UHG0 476 aa18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 GIT1Q9Y2X7 761 aa18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 HBS1LQ9Y450 684 aaKnown RBP18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 RPS6KL1Q9Y6S9 549 aa18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 MYO18AQ92614 2054 aaKnown RBP18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 ESRRAP11474 423 aaPredicted RBP18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 RPL9P32969 192 aaKnown RBP18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 CCNG1P51959 295 aa18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 ZNF135P52742 658 aaPredicted RBP18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 FASTKD1Q53R41 847 aaKnown RBP18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 N4BP2L1Q5TBK1 243 aaPredicted RBP18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 RSPH3Q86UC2 560 aa18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 NPWQ8N729 165 aa18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 OR52K1Q8NGK4 314 aa18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 SOCS4Q8WXH5 440 aa18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 HDAC11Q96DB2 347 aa18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 COLEC11Q9BWP8 271 aa18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 DENND2DQ9H6A0 471 aaPredicted RBP18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 YY1AP1Q9H869 796 aa18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 LRRC40Q9H9A6 602 aa18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 NKX1-2Q9UD57 310 aaPredicted RBP18.43■□□□□ 0.54
PDLIM7-207ENST00000486828 ARL5CA6NH57 179 aa18.42■□□□□ 0.54
PDLIM7-207ENST00000486828 GYG2O15488 501 aa18.42■□□□□ 0.54
PDLIM7-207ENST00000486828 GSC2O15499 205 aa18.42■□□□□ 0.54
PDLIM7-207ENST00000486828 MTSS1O43312 755 aa18.42■□□□□ 0.54
PDLIM7-207ENST00000486828 DIAPH2O60879 1101 aa18.42■□□□□ 0.54
PDLIM7-207ENST00000486828 ATP5BP06576 529 aaKnown RBP18.42■□□□□ 0.54
PDLIM7-207ENST00000486828 C6orf222P0C671 652 aaPredicted RBP18.42■□□□□ 0.54
PDLIM7-207ENST00000486828 ERVK-10P10266 1014 aa18.42■□□□□ 0.54
PDLIM7-207ENST00000486828 MX2P20592 715 aa18.42■□□□□ 0.54
PDLIM7-207ENST00000486828 PCSK1P29120 753 aa18.42■□□□□ 0.54
PDLIM7-207ENST00000486828 GP5P40197 560 aa18.42■□□□□ 0.54
PDLIM7-207ENST00000486828 IRX4P78413 519 aa18.42■□□□□ 0.54
PDLIM7-207ENST00000486828 C16orf46Q6P387 395 aa18.42■□□□□ 0.54
PDLIM7-207ENST00000486828 C17orf99Q6UX52 265 aa18.42■□□□□ 0.54
PDLIM7-207ENST00000486828 AGMOQ6ZNB7 445 aa18.42■□□□□ 0.54
PDLIM7-207ENST00000486828 CTU1Q7Z7A3 348 aaKnown RBP18.42■□□□□ 0.54
PDLIM7-207ENST00000486828 CPNE1Q99829 537 aa18.42■□□□□ 0.54
PDLIM7-207ENST00000486828 MTG1Q9BT17 334 aaPredicted RBP18.42■□□□□ 0.54
PDLIM7-207ENST00000486828 SENP6Q9GZR1 1112 aaPredicted RBP18.42■□□□□ 0.54
PDLIM7-207ENST00000486828 CSNK1G1Q9HCP0 422 aa18.42■□□□□ 0.54
PDLIM7-207ENST00000486828 TXNDC16Q9P2K2 825 aa18.42■□□□□ 0.54
PDLIM7-207ENST00000486828 ERI2A8K979 691 aaKnown RBP18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 PLIN3O60664 434 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 DUSP11O75319 330 aaKnown RBP18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 GARSP41250 739 aaKnown RBP18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 CXCR3P49682 368 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 SCNN1GP51170 649 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 AQP5P55064 265 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 PDE1BQ01064 536 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 GALNT2Q10471 571 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 OLIG2Q13516 323 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 FRG1Q14331 258 aaKnown RBP18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 INSCQ1MX18 579 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 GRTP1Q5TC63 336 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 MBLAC2Q68D91 279 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 KCTD11Q693B1 232 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 CES3Q6UWW8 571 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 C4orf50Q6ZRC1 276 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 RINLQ6ZS11 566 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 ZCCHC23Q6ZST2 131 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 ENDOVQ8N8Q3 282 aaKnown RBP18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 PPP1R14CQ8TAE6 165 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 IRGQQ8WZA9 623 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 FCRL3Q96P31 734 aaPredicted RBP18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 AGAP3Q96P47 875 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 EPAS1Q99814 870 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 GBA3Q9H227 469 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 WDCPQ9H6R7 721 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 CASS4Q9NQ75 786 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 TRHDEQ9UKU6 1024 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 CASTOR2A6NHX0 329 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 CAPN14A8MX76 684 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 ZBTB24O43167 697 aaPredicted RBP18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 CHRNA1P02708 482 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 CTSHP09668 335 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 KITP10721 976 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 GNAZP19086 355 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 UPP1Q16831 310 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 TIGD5Q53EQ6 642 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 GDF6Q6KF10 455 aaPredicted RBP18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 EDEM1Q92611 657 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 MYLPFQ96A32 169 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 RSRC1Q96IZ7 334 aaKnown RBP18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 NUDCD1Q96RS6 583 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 SIKE1Q9BRV8 207 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 TAS2R1Q9NYW7 299 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 IL1RAPL1Q9NZN1 696 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 BFARQ9NZS9 450 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 ARMCX1Q9P291 453 aa18.41■□□□□ 0.54
PDLIM7-207ENST00000486828 MARCOQ9UEW3 520 aaPredicted RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms