RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 K7EQS6 105 aa13.36□□□□□ -0.27
SSR4-211ENST00000486204 TSPAN3O60637 253 aa13.36□□□□□ -0.27
SSR4-211ENST00000486204 ADCY5O95622 1261 aa13.36□□□□□ -0.27
SSR4-211ENST00000486204 CAPNS1P04632 268 aa13.36□□□□□ -0.27
SSR4-211ENST00000486204 TPM1P09493 284 aa13.36□□□□□ -0.27
SSR4-211ENST00000486204 CISD3P0C7P0 127 aa13.36□□□□□ -0.27
SSR4-211ENST00000486204 PDGFRAP16234 1089 aa13.36□□□□□ -0.27
SSR4-211ENST00000486204 DRD1P21728 446 aa13.36□□□□□ -0.27
SSR4-211ENST00000486204 SDC4P31431 198 aa13.36□□□□□ -0.27
SSR4-211ENST00000486204 CCR1P32246 355 aa13.36□□□□□ -0.27
SSR4-211ENST00000486204 GBP1P32455 592 aa13.36□□□□□ -0.27
SSR4-211ENST00000486204 SLC11A2P49281 568 aa13.36□□□□□ -0.27
SSR4-211ENST00000486204 DEUP1Q05D60 604 aa13.36□□□□□ -0.27
SSR4-211ENST00000486204 KDSRQ06136 332 aa13.36□□□□□ -0.27
SSR4-211ENST00000486204 MAMLD1Q13495 774 aa13.36□□□□□ -0.27
SSR4-211ENST00000486204 BRMS1LQ5PSV4 323 aa13.36□□□□□ -0.27
SSR4-211ENST00000486204 ARTNQ5T4W7 220 aa13.36□□□□□ -0.27
SSR4-211ENST00000486204 RFWD3Q6PCD5 774 aa13.36□□□□□ -0.27
SSR4-211ENST00000486204 ATP6V0D2Q8N8Y2 350 aa13.36□□□□□ -0.27
SSR4-211ENST00000486204 CENPIQ92674 756 aaPredicted RBP13.36□□□□□ -0.27
SSR4-211ENST00000486204 MCEEQ96PE7 176 aa13.36□□□□□ -0.27
SSR4-211ENST00000486204 PNKPQ96T60 521 aa13.36□□□□□ -0.27
SSR4-211ENST00000486204 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.36□□□□□ -0.27
SSR4-211ENST00000486204 IRX2Q9BZI1 471 aaPredicted RBP13.36□□□□□ -0.27
SSR4-211ENST00000486204 ARHGEF38Q9NXL2 777 aa13.36□□□□□ -0.27
SSR4-211ENST00000486204 CLEC4EQ9ULY5 219 aa13.36□□□□□ -0.27
SSR4-211ENST00000486204 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.35□□□□□ -0.27
SSR4-211ENST00000486204 CCP110O43303 1012 aa13.35□□□□□ -0.27
SSR4-211ENST00000486204 KAT7O95251 611 aa13.35□□□□□ -0.27
SSR4-211ENST00000486204 F9P00740 461 aa13.35□□□□□ -0.27
SSR4-211ENST00000486204 SLC2A3P11169 496 aa13.35□□□□□ -0.27
SSR4-211ENST00000486204 TACR2P21452 398 aa13.35□□□□□ -0.27
SSR4-211ENST00000486204 GPD1P21695 349 aa13.35□□□□□ -0.27
SSR4-211ENST00000486204 RDXP35241 583 aaKnown RBP13.35□□□□□ -0.27
SSR4-211ENST00000486204 ZNF143P52747 638 aaPredicted RBP13.35□□□□□ -0.27
SSR4-211ENST00000486204 HDAC4P56524 1084 aa13.35□□□□□ -0.27
SSR4-211ENST00000486204 ATP11AP98196 1134 aa13.35□□□□□ -0.27
SSR4-211ENST00000486204 GFPT1Q06210 699 aaPredicted RBP13.35□□□□□ -0.27
SSR4-211ENST00000486204 GRSF1Q12849 480 aaKnown RBP eCLIP13.35□□□□□ -0.27
SSR4-211ENST00000486204 SLC18A3Q16572 532 aa13.35□□□□□ -0.27
SSR4-211ENST00000486204 CDO1Q16878 200 aa13.35□□□□□ -0.27
SSR4-211ENST00000486204 MPPE1Q53F39 396 aa13.35□□□□□ -0.27
SSR4-211ENST00000486204 MS4A13Q5J8X5 152 aa13.35□□□□□ -0.27
SSR4-211ENST00000486204 RAP1GAP2Q684P5 730 aa13.35□□□□□ -0.27
SSR4-211ENST00000486204 ALKBH5Q6P6C2 394 aaKnown RBP13.35□□□□□ -0.27
SSR4-211ENST00000486204 STRADAQ7RTN6 431 aa13.35□□□□□ -0.27
SSR4-211ENST00000486204 VPS36Q86VN1 386 aa13.35□□□□□ -0.27
SSR4-211ENST00000486204 TERB1Q8NA31 727 aa13.35□□□□□ -0.27
SSR4-211ENST00000486204 ZNF653Q96CK0 615 aa13.35□□□□□ -0.27
SSR4-211ENST00000486204 BBC3Q96PG8 261 aaPredicted RBP13.35□□□□□ -0.27
SSR4-211ENST00000486204 TRIM7Q9C029 511 aa13.35□□□□□ -0.27
SSR4-211ENST00000486204 TKTL2Q9H0I9 626 aa13.35□□□□□ -0.27
SSR4-211ENST00000486204 ARHGEF4Q9NR80 690 aa13.35□□□□□ -0.27
SSR4-211ENST00000486204 TMPRSS4Q9NRS4 437 aa13.35□□□□□ -0.27
SSR4-211ENST00000486204 DNAJC17Q9NVM6 304 aaKnown RBP13.35□□□□□ -0.27
SSR4-211ENST00000486204 POLR3BQ9NW08 1133 aaPredicted RBP13.35□□□□□ -0.27
SSR4-211ENST00000486204 CNOT8Q9UFF9 292 aaKnown RBP13.35□□□□□ -0.27
SSR4-211ENST00000486204 HCN2Q9UL51 889 aa13.35□□□□□ -0.27
SSR4-211ENST00000486204 SPAARA0A1B0GVQ0 90 aa13.34□□□□□ -0.27
SSR4-211ENST00000486204 FAM221BA6H8Z2 402 aa13.34□□□□□ -0.27
SSR4-211ENST00000486204 TMEM191CA6NGB0 347 aa13.34□□□□□ -0.27
SSR4-211ENST00000486204 PATE3B3GLJ2 98 aa13.34□□□□□ -0.27
SSR4-211ENST00000486204 RNF40O75150 1001 aa13.34□□□□□ -0.27
SSR4-211ENST00000486204 PAGE1O75459 146 aa13.34□□□□□ -0.27
SSR4-211ENST00000486204 CYBBP04839 570 aa13.34□□□□□ -0.27
SSR4-211ENST00000486204 MYBL1P10243 752 aa13.34□□□□□ -0.27
SSR4-211ENST00000486204 ABCB4P21439 1286 aa13.34□□□□□ -0.27
SSR4-211ENST00000486204 FECHP22830 423 aa13.34□□□□□ -0.27
SSR4-211ENST00000486204 CDC25BP30305 580 aa13.34□□□□□ -0.27
SSR4-211ENST00000486204 GGCXP38435 758 aa13.34□□□□□ -0.27
SSR4-211ENST00000486204 DGKGP49619 791 aa13.34□□□□□ -0.27
SSR4-211ENST00000486204 RPS24P62847 133 aaKnown RBP13.34□□□□□ -0.27
SSR4-211ENST00000486204 IRX4P78413 519 aa13.34□□□□□ -0.27
SSR4-211ENST00000486204 MPP7Q5T2T1 576 aa13.34□□□□□ -0.27
SSR4-211ENST00000486204 GRAMD4Q6IC98 578 aa13.34□□□□□ -0.27
SSR4-211ENST00000486204 CHSY1Q86X52 802 aa13.34□□□□□ -0.27
SSR4-211ENST00000486204 FAM131BQ86XD5 332 aa13.34□□□□□ -0.27
SSR4-211ENST00000486204 ZNF683Q8IZ20 524 aa13.34□□□□□ -0.27
SSR4-211ENST00000486204 WFDC5Q8TCV5 224 aa13.34□□□□□ -0.27
SSR4-211ENST00000486204 DDI1Q8WTU0 396 aa13.34□□□□□ -0.27
SSR4-211ENST00000486204 EXOC4Q96A65 974 aa13.34□□□□□ -0.27
SSR4-211ENST00000486204 ARHGEF26Q96DR7 871 aa13.34□□□□□ -0.27
SSR4-211ENST00000486204 TRIM11Q96F44 468 aa13.34□□□□□ -0.27
SSR4-211ENST00000486204 XPO6Q96QU8 1125 aaKnown RBP13.34□□□□□ -0.27
SSR4-211ENST00000486204 HHIPQ96QV1 700 aa13.34□□□□□ -0.27
SSR4-211ENST00000486204 THAP2Q9H0W7 228 aa13.34□□□□□ -0.27
SSR4-211ENST00000486204 PARVAQ9NVD7 372 aa13.34□□□□□ -0.27
SSR4-211ENST00000486204 DEC1Q9P2X7 70 aa13.34□□□□□ -0.27
SSR4-211ENST00000486204 SLC27A6Q9Y2P4 619 aa13.34□□□□□ -0.27
SSR4-211ENST00000486204 HS3ST4Q9Y661 456 aa13.34□□□□□ -0.27
SSR4-211ENST00000486204 FREM2Q5SZK8 3169 aa13.34□□□□□ -0.27
SSR4-211ENST00000486204 ASH1LQ9NR48 2969 aaKnown RBP13.33□□□□□ -0.28
SSR4-211ENST00000486204 PRRT4C9JH25 899 aa13.33□□□□□ -0.28
SSR4-211ENST00000486204 H0Y626 953 aa13.33□□□□□ -0.28
SSR4-211ENST00000486204 TRIM16O95361 564 aa13.33□□□□□ -0.28
SSR4-211ENST00000486204 APODP05090 189 aa13.33□□□□□ -0.28
SSR4-211ENST00000486204 GRIA2P42262 883 aa13.33□□□□□ -0.28
SSR4-211ENST00000486204 KIR2DL1P43626 348 aaPredicted RBP13.33□□□□□ -0.28
SSR4-211ENST00000486204 IRAK1P51617 712 aa13.33□□□□□ -0.28
SSR4-211ENST00000486204 GALCP54803 685 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms