RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 LTB4R2Q9NPC1 389 aa11.73□□□□□ -0.53
NUP50-216ENST00000486184 RYDENQ9NUL5 291 aaKnown RBP11.73□□□□□ -0.53
NUP50-216ENST00000486184 DDX56Q9NY93 547 aaKnown RBP11.73□□□□□ -0.53
NUP50-216ENST00000486184 DONSONQ9NYP3 566 aa11.73□□□□□ -0.53
NUP50-216ENST00000486184 MPP6Q9NZW5 540 aa11.73□□□□□ -0.53
NUP50-216ENST00000486184 KIAA1522Q9P206 1035 aaPredicted RBP11.73□□□□□ -0.53
NUP50-216ENST00000486184 SALL4Q9UJQ4 1053 aa11.73□□□□□ -0.53
NUP50-216ENST00000486184 AMFRQ9UKV5 643 aa11.73□□□□□ -0.53
NUP50-216ENST00000486184 HYOU1Q9Y4L1 999 aa11.73□□□□□ -0.53
NUP50-216ENST00000486184 IGLV3-10A0A075B6K4 115 aa11.72□□□□□ -0.53
NUP50-216ENST00000486184 A0A0U1RQJ8 604 aa11.72□□□□□ -0.53
NUP50-216ENST00000486184 LRRD1A4D1F6 860 aa11.72□□□□□ -0.53
NUP50-216ENST00000486184 DRGXA6NNA5 263 aa11.72□□□□□ -0.53
NUP50-216ENST00000486184 FAM72CH0Y354 149 aa11.72□□□□□ -0.53
NUP50-216ENST00000486184 PALMO75781 387 aa11.72□□□□□ -0.53
NUP50-216ENST00000486184 CNTN5O94779 1100 aa11.72□□□□□ -0.53
NUP50-216ENST00000486184 RHOQP17081 205 aa11.72□□□□□ -0.53
NUP50-216ENST00000486184 PDK2Q15119 407 aa11.72□□□□□ -0.53
NUP50-216ENST00000486184 E2F5Q15329 346 aa11.72□□□□□ -0.53
NUP50-216ENST00000486184 DPYSL2Q16555 572 aa11.72□□□□□ -0.53
NUP50-216ENST00000486184 CA9Q16790 459 aa11.72□□□□□ -0.53
NUP50-216ENST00000486184 GAB4Q2WGN9 574 aa11.72□□□□□ -0.53
NUP50-216ENST00000486184 ALFQ53S48 1182 aa11.72□□□□□ -0.53
NUP50-216ENST00000486184 DGKKQ5KSL6 1271 aa11.72□□□□□ -0.53
NUP50-216ENST00000486184 FAM72AQ5TYM5 149 aa11.72□□□□□ -0.53
NUP50-216ENST00000486184 LRRC38Q5VT99 294 aa11.72□□□□□ -0.53
NUP50-216ENST00000486184 FAM72DQ6L9T8 149 aa11.72□□□□□ -0.53
NUP50-216ENST00000486184 ZNF662Q6ZS27 426 aa11.72□□□□□ -0.53
NUP50-216ENST00000486184 RFX8Q6ZV50 586 aa11.72□□□□□ -0.53
NUP50-216ENST00000486184 FAM72BQ86X60 149 aa11.72□□□□□ -0.53
NUP50-216ENST00000486184 CPNE8Q86YQ8 564 aa11.72□□□□□ -0.53
NUP50-216ENST00000486184 AHI1Q8N157 1196 aa11.72□□□□□ -0.53
NUP50-216ENST00000486184 UBL4BQ8N7F7 174 aa11.72□□□□□ -0.53
NUP50-216ENST00000486184 TERB1Q8NA31 727 aa11.72□□□□□ -0.53
NUP50-216ENST00000486184 FIBINQ8TAL6 211 aa11.72□□□□□ -0.53
NUP50-216ENST00000486184 WFIKKN2Q8TEU8 576 aa11.72□□□□□ -0.53
NUP50-216ENST00000486184 ATRIPQ8WXE1 791 aa11.72□□□□□ -0.53
NUP50-216ENST00000486184 MYEOVQ96EZ4 313 aa11.72□□□□□ -0.53
NUP50-216ENST00000486184 CALN1Q9BXU9 219 aa11.72□□□□□ -0.53
NUP50-216ENST00000486184 MUC3BQ9H195 1237 aa11.72□□□□□ -0.53
NUP50-216ENST00000486184 GOLPH3Q9H4A6 298 aa11.72□□□□□ -0.53
NUP50-216ENST00000486184 ABCB8Q9NUT2 735 aa11.72□□□□□ -0.53
NUP50-216ENST00000486184 KLHL11Q9NVR0 708 aa11.72□□□□□ -0.53
NUP50-216ENST00000486184 GGA2Q9UJY4 613 aa11.72□□□□□ -0.53
NUP50-216ENST00000486184 SLC27A6Q9Y2P4 619 aa11.72□□□□□ -0.53
NUP50-216ENST00000486184 ATG2BQ96BY7 2078 aa11.71□□□□□ -0.53
NUP50-216ENST00000486184 CCDC66A2RUB6 948 aa11.71□□□□□ -0.53
NUP50-216ENST00000486184 GRID2IPA4D2P6 1211 aa11.71□□□□□ -0.53
NUP50-216ENST00000486184 GOLGA6L9A6NEM1 432 aa11.71□□□□□ -0.53
NUP50-216ENST00000486184 FAM170BA6NMN3 283 aa11.71□□□□□ -0.53
NUP50-216ENST00000486184 PABPC1P11940 636 aaKnown RBP11.71□□□□□ -0.53
NUP50-216ENST00000486184 GOT1P17174 413 aa11.71□□□□□ -0.53
NUP50-216ENST00000486184 POLR2EP19388 210 aaKnown RBP11.71□□□□□ -0.53
NUP50-216ENST00000486184 MSNP26038 577 aaKnown RBP11.71□□□□□ -0.53
NUP50-216ENST00000486184 MAPKAPK2P49137 400 aa11.71□□□□□ -0.53
NUP50-216ENST00000486184 IRAK1P51617 712 aa11.71□□□□□ -0.53
NUP50-216ENST00000486184 SEC13P55735 322 aa11.71□□□□□ -0.53
NUP50-216ENST00000486184 SEMA3BQ13214 749 aa11.71□□□□□ -0.53
NUP50-216ENST00000486184 SLC12A1Q13621 1099 aa11.71□□□□□ -0.53
NUP50-216ENST00000486184 FBXO43Q4G163 708 aa11.71□□□□□ -0.53
NUP50-216ENST00000486184 TMEM196Q5HYL7 178 aa11.71□□□□□ -0.53
NUP50-216ENST00000486184 MANEALQ5VSG8 457 aa11.71□□□□□ -0.53
NUP50-216ENST00000486184 NAIF1Q69YI7 327 aaPredicted RBP11.71□□□□□ -0.53
NUP50-216ENST00000486184 TXNRD3NBQ6F5E7 133 aa11.71□□□□□ -0.53
NUP50-216ENST00000486184 FSTL4Q6MZW2 842 aa11.71□□□□□ -0.53
NUP50-216ENST00000486184 CYP4V2Q6ZWL3 525 aaPredicted RBP11.71□□□□□ -0.53
NUP50-216ENST00000486184 SETD3Q86TU7 594 aaPredicted RBP11.71□□□□□ -0.53
NUP50-216ENST00000486184 ZNF354CQ86Y25 554 aa11.71□□□□□ -0.53
NUP50-216ENST00000486184 CCDC50Q8IVM0 306 aa11.71□□□□□ -0.53
NUP50-216ENST00000486184 ZNF683Q8IZ20 524 aa11.71□□□□□ -0.53
NUP50-216ENST00000486184 PJA1Q8NG27 643 aa11.71□□□□□ -0.53
NUP50-216ENST00000486184 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.71□□□□□ -0.53
NUP50-216ENST00000486184 PBXIP1Q96AQ6 731 aa11.71□□□□□ -0.53
NUP50-216ENST00000486184 MAGEB5Q9BZ81 275 aa11.71□□□□□ -0.53
NUP50-216ENST00000486184 FOXQ1Q9C009 403 aa11.71□□□□□ -0.53
NUP50-216ENST00000486184 CIPCQ9C0C6 399 aa11.71□□□□□ -0.53
NUP50-216ENST00000486184 PCDH18Q9HCL0 1135 aa11.71□□□□□ -0.53
NUP50-216ENST00000486184 TMEM248Q9NWD8 314 aa11.71□□□□□ -0.53
NUP50-216ENST00000486184 RCOR3Q9P2K3 495 aaPredicted RBP11.71□□□□□ -0.53
NUP50-216ENST00000486184 DNAI1Q9UI46 699 aa11.71□□□□□ -0.53
NUP50-216ENST00000486184 METRNQ9UJH8 293 aa11.71□□□□□ -0.53
NUP50-216ENST00000486184 FBXO10Q9UK96 956 aa11.71□□□□□ -0.53
NUP50-216ENST00000486184 SIT1Q9Y3P8 196 aa11.71□□□□□ -0.53
NUP50-216ENST00000486184 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.71□□□□□ -0.53
NUP50-216ENST00000486184 CAPN6Q9Y6Q1 641 aa11.71□□□□□ -0.53
NUP50-216ENST00000486184 NYNRINQ9P2P1 1898 aaKnown RBP11.71□□□□□ -0.53
NUP50-216ENST00000486184 CHD5Q8TDI0 1954 aa11.7□□□□□ -0.54
NUP50-216ENST00000486184 SHROOM3Q8TF72 1996 aa11.7□□□□□ -0.54
NUP50-216ENST00000486184 TECTAO75443 2155 aa11.7□□□□□ -0.54
NUP50-216ENST00000486184 MIF4GDA9UHW6 222 aaKnown RBP11.7□□□□□ -0.54
NUP50-216ENST00000486184 TRIM24O15164 1050 aa11.7□□□□□ -0.54
NUP50-216ENST00000486184 FTCDO95954 541 aa11.7□□□□□ -0.54
NUP50-216ENST00000486184 EGFP01133 1207 aa11.7□□□□□ -0.54
NUP50-216ENST00000486184 ATP5BP06576 529 aaKnown RBP11.7□□□□□ -0.54
NUP50-216ENST00000486184 CISD3P0C7P0 127 aa11.7□□□□□ -0.54
NUP50-216ENST00000486184 TARSP26639 723 aaKnown RBP11.7□□□□□ -0.54
NUP50-216ENST00000486184 HLA-FP30511 346 aa11.7□□□□□ -0.54
NUP50-216ENST00000486184 HOXC13P31276 330 aa11.7□□□□□ -0.54
NUP50-216ENST00000486184 CD70P32970 193 aa11.7□□□□□ -0.54
NUP50-216ENST00000486184 ETFBP38117 255 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms