RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 SPEM2Q0P670 501 aa17.62■□□□□ 0.41
VIM-205ENST00000485947 EIF4HQ15056 248 aaKnown RBP17.62■□□□□ 0.41
VIM-205ENST00000485947 MPPE1Q53F39 396 aa17.62■□□□□ 0.41
VIM-205ENST00000485947 MPP7Q5T2T1 576 aa17.62■□□□□ 0.41
VIM-205ENST00000485947 ADGRF1Q5T601 910 aa17.62■□□□□ 0.41
VIM-205ENST00000485947 FAM102AQ5T9C2 384 aaPredicted RBP17.62■□□□□ 0.41
VIM-205ENST00000485947 FYB2Q5VWT5 728 aa17.62■□□□□ 0.41
VIM-205ENST00000485947 TMEM92Q6UXU6 159 aa17.62■□□□□ 0.41
VIM-205ENST00000485947 SLC26A9Q7LBE3 791 aa17.62■□□□□ 0.41
VIM-205ENST00000485947 ARCQ7LC44 396 aa17.62■□□□□ 0.41
VIM-205ENST00000485947 KBTBD6Q86V97 674 aa17.62■□□□□ 0.41
VIM-205ENST00000485947 UCMAQ8WVF2 138 aa17.62■□□□□ 0.41
VIM-205ENST00000485947 ZNF592Q92610 1267 aa17.62■□□□□ 0.41
VIM-205ENST00000485947 METTL5Q9NRN9 209 aaKnown RBP17.62■□□□□ 0.41
VIM-205ENST00000485947 ASNSD1Q9NWL6 643 aa17.62■□□□□ 0.41
VIM-205ENST00000485947 IP6K2Q9UHH9 426 aa17.62■□□□□ 0.41
VIM-205ENST00000485947 KIAA1549LQ6ZVL6 1849 aa17.61■□□□□ 0.41
VIM-205ENST00000485947 ATG2BQ96BY7 2078 aa17.61■□□□□ 0.41
VIM-205ENST00000485947 GOLGA8SH3BPF8 625 aa17.61■□□□□ 0.41
VIM-205ENST00000485947 IRAK2O43187 625 aa17.61■□□□□ 0.41
VIM-205ENST00000485947 PAPSS1O43252 624 aaPredicted RBP17.61■□□□□ 0.41
VIM-205ENST00000485947 GABBR2O75899 941 aa17.61■□□□□ 0.41
VIM-205ENST00000485947 ZNF806P0C7X5 589 aa17.61■□□□□ 0.41
VIM-205ENST00000485947 DPP6P42658 865 aa17.61■□□□□ 0.41
VIM-205ENST00000485947 TUBB2AQ13885 445 aa17.61■□□□□ 0.41
VIM-205ENST00000485947 MESDQ14696 234 aa17.61■□□□□ 0.41
VIM-205ENST00000485947 EFHC1Q5JVL4 640 aa17.61■□□□□ 0.41
VIM-205ENST00000485947 MEI1Q5TIA1 1274 aa17.61■□□□□ 0.41
VIM-205ENST00000485947 EMC10Q5UCC4 262 aa17.61■□□□□ 0.41
VIM-205ENST00000485947 ANO7Q6IWH7 933 aa17.61■□□□□ 0.41
VIM-205ENST00000485947 PHLDB2Q86SQ0 1253 aa17.61■□□□□ 0.41
VIM-205ENST00000485947 MDGA1Q8NFP4 955 aa17.61■□□□□ 0.41
VIM-205ENST00000485947 NETO1Q8TDF5 533 aa17.61■□□□□ 0.41
VIM-205ENST00000485947 SPACA7Q96KW9 195 aa17.61■□□□□ 0.41
VIM-205ENST00000485947 MCEEQ96PE7 176 aa17.61■□□□□ 0.41
VIM-205ENST00000485947 GABRG3Q99928 467 aa17.61■□□□□ 0.41
VIM-205ENST00000485947 DDX50Q9BQ39 737 aaKnown RBP17.61■□□□□ 0.41
VIM-205ENST00000485947 RTKNQ9BST9 563 aa17.61■□□□□ 0.41
VIM-205ENST00000485947 TUBB2BQ9BVA1 445 aa17.61■□□□□ 0.41
VIM-205ENST00000485947 DUSP15Q9H1R2 295 aaPredicted RBP17.61■□□□□ 0.41
VIM-205ENST00000485947 PARD6AQ9NPB6 346 aa17.61■□□□□ 0.41
VIM-205ENST00000485947 AMFRQ9UKV5 643 aa17.61■□□□□ 0.41
VIM-205ENST00000485947 USP24Q9UPU5 2620 aa17.61■□□□□ 0.41
VIM-205ENST00000485947 MYOFQ9NZM1 2061 aa17.6■□□□□ 0.41
VIM-205ENST00000485947 PROSCO94903 275 aa17.6■□□□□ 0.41
VIM-205ENST00000485947 IGLV3-27P01718 113 aa17.6■□□□□ 0.41
VIM-205ENST00000485947 GLI1P08151 1106 aa17.6■□□□□ 0.41
VIM-205ENST00000485947 HMBSP08397 361 aa17.6■□□□□ 0.41
VIM-205ENST00000485947 DESP17661 470 aa17.6■□□□□ 0.41
VIM-205ENST00000485947 SLC11A2P49281 568 aa17.6■□□□□ 0.41
VIM-205ENST00000485947 PIGHQ14442 188 aaPredicted RBP17.6■□□□□ 0.41
VIM-205ENST00000485947 ACAP1Q15027 740 aa17.6■□□□□ 0.41
VIM-205ENST00000485947 PAPD7Q5XG87 772 aaKnown RBP17.6■□□□□ 0.41
VIM-205ENST00000485947 PRR23CQ6ZRP0 262 aa17.6■□□□□ 0.41
VIM-205ENST00000485947 PEX26Q7Z412 305 aa17.6■□□□□ 0.41
VIM-205ENST00000485947 NT5DC3Q86UY8 548 aa17.6■□□□□ 0.41
VIM-205ENST00000485947 SFTPA1Q8IWL2 248 aa17.6■□□□□ 0.41
VIM-205ENST00000485947 CHPFQ8IZ52 775 aa17.6■□□□□ 0.41
VIM-205ENST00000485947 NIPA2Q8N8Q9 360 aa17.6■□□□□ 0.41
VIM-205ENST00000485947 NDRG1Q92597 394 aaKnown RBP17.6■□□□□ 0.41
VIM-205ENST00000485947 EDEM1Q92611 657 aa17.6■□□□□ 0.41
VIM-205ENST00000485947 SERPINB11Q96P15 392 aa17.6■□□□□ 0.41
VIM-205ENST00000485947 VPS45Q9NRW7 570 aa17.6■□□□□ 0.41
VIM-205ENST00000485947 POLR3BQ9NW08 1133 aaPredicted RBP17.6■□□□□ 0.41
VIM-205ENST00000485947 TMEM51Q9NW97 253 aa17.6■□□□□ 0.41
VIM-205ENST00000485947 TMEM59LQ9UK28 342 aa17.6■□□□□ 0.41
VIM-205ENST00000485947 CDV3Q9UKY7 258 aaKnown RBP17.6■□□□□ 0.41
VIM-205ENST00000485947 ALG6Q9Y672 507 aa17.6■□□□□ 0.41
VIM-205ENST00000485947 MIF4GDA9UHW6 222 aaKnown RBP17.59■□□□□ 0.41
VIM-205ENST00000485947 FANCGO15287 622 aa17.59■□□□□ 0.41
VIM-205ENST00000485947 ZNF217O75362 1048 aa17.59■□□□□ 0.41
VIM-205ENST00000485947 FTCDO95954 541 aa17.59■□□□□ 0.41
VIM-205ENST00000485947 HOXB2P14652 356 aa17.59■□□□□ 0.41
VIM-205ENST00000485947 PRLRP16471 622 aa17.59■□□□□ 0.41
VIM-205ENST00000485947 HOXC13P31276 330 aa17.59■□□□□ 0.41
VIM-205ENST00000485947 P2RY2P41231 377 aa17.59■□□□□ 0.41
VIM-205ENST00000485947 LIMK1P53667 647 aa17.59■□□□□ 0.41
VIM-205ENST00000485947 RPL7AP62424 266 aaKnown RBP17.59■□□□□ 0.41
VIM-205ENST00000485947 MTA1Q13330 715 aa17.59■□□□□ 0.41
VIM-205ENST00000485947 RSPO4Q2I0M5 234 aaPredicted RBP17.59■□□□□ 0.41
VIM-205ENST00000485947 PLA2G2CQ5R387 149 aa17.59■□□□□ 0.41
VIM-205ENST00000485947 PMS2CLQ68D20 193 aa17.59■□□□□ 0.41
VIM-205ENST00000485947 ANKS1BQ7Z6G8 1248 aa17.59■□□□□ 0.41
VIM-205ENST00000485947 SCUBE3Q8IX30 993 aa17.59■□□□□ 0.41
VIM-205ENST00000485947 DDI1Q8WTU0 396 aa17.59■□□□□ 0.41
VIM-205ENST00000485947 PIWIL1Q96J94 861 aaKnown RBP17.59■□□□□ 0.41
VIM-205ENST00000485947 BCCIPQ9P287 314 aaKnown RBP eCLIP17.59■□□□□ 0.41
VIM-205ENST00000485947 SFMBT1Q9UHJ3 866 aa17.59■□□□□ 0.41
VIM-205ENST00000485947 SPAG17Q6Q759 2223 aa17.58■□□□□ 0.4
VIM-205ENST00000485947 PRRT4C9JH25 899 aa17.58■□□□□ 0.4
VIM-205ENST00000485947 PIK3R2O00459 728 aa17.58■□□□□ 0.4
VIM-205ENST00000485947 HSF2BPO75031 334 aa17.58■□□□□ 0.4
VIM-205ENST00000485947 ATP1A1P05023 1023 aaKnown RBP17.58■□□□□ 0.4
VIM-205ENST00000485947 NCAM1P13591 858 aa17.58■□□□□ 0.4
VIM-205ENST00000485947 TCP1P17987 556 aaKnown RBP17.58■□□□□ 0.4
VIM-205ENST00000485947 GPD1P21695 349 aa17.58■□□□□ 0.4
VIM-205ENST00000485947 GBP1P32455 592 aa17.58■□□□□ 0.4
VIM-205ENST00000485947 RFC1P35251 1148 aaPredicted RBP17.58■□□□□ 0.4
VIM-205ENST00000485947 ENPP2Q13822 863 aa17.58■□□□□ 0.4
VIM-205ENST00000485947 JOSD2Q8TAC2 188 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms