RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 HGSNATQ68CP4 663 aa5.94□□□□□ -1.46
CUX1-208ENST00000485792 KIAA1211LQ6NV74 962 aa5.94□□□□□ -1.46
CUX1-208ENST00000485792 RFWD3Q6PCD5 774 aa5.94□□□□□ -1.46
CUX1-208ENST00000485792 PHLDB2Q86SQ0 1253 aa5.94□□□□□ -1.46
CUX1-208ENST00000485792 CIR1Q86X95 450 aaPredicted RBP5.94□□□□□ -1.46
CUX1-208ENST00000485792 XYLT1Q86Y38 959 aa5.94□□□□□ -1.46
CUX1-208ENST00000485792 PHF13Q86YI8 300 aaPredicted RBP5.94□□□□□ -1.46
CUX1-208ENST00000485792 UNC45BQ8IWX7 931 aa5.94□□□□□ -1.46
CUX1-208ENST00000485792 SIX6OS1Q8N1H7 587 aa5.94□□□□□ -1.46
CUX1-208ENST00000485792 ARFGAP1Q8N6T3 406 aa5.94□□□□□ -1.46
CUX1-208ENST00000485792 TERB1Q8NA31 727 aa5.94□□□□□ -1.46
CUX1-208ENST00000485792 IL17RCQ8NAC3 791 aa5.94□□□□□ -1.46
CUX1-208ENST00000485792 TMEM35BQ8NCS4 154 aa5.94□□□□□ -1.46
CUX1-208ENST00000485792 TTC16Q8NEE8 873 aa5.94□□□□□ -1.46
CUX1-208ENST00000485792 CCDC26Q8TAB7 109 aa5.94□□□□□ -1.46
CUX1-208ENST00000485792 SLC30A5Q8TAD4 765 aa5.94□□□□□ -1.46
CUX1-208ENST00000485792 SORCS1Q8WY21 1168 aa5.94□□□□□ -1.46
CUX1-208ENST00000485792 BHMTQ93088 406 aa5.94□□□□□ -1.46
CUX1-208ENST00000485792 SERPINB11Q96P15 392 aa5.94□□□□□ -1.46
CUX1-208ENST00000485792 TRIM62Q9BVG3 475 aa5.94□□□□□ -1.46
CUX1-208ENST00000485792 GRIP2Q9C0E4 1043 aa5.94□□□□□ -1.46
CUX1-208ENST00000485792 MIS12Q9H081 205 aa5.94□□□□□ -1.46
CUX1-208ENST00000485792 NUCKS1Q9H1E3 243 aaKnown RBP5.94□□□□□ -1.46
CUX1-208ENST00000485792 PARD6AQ9NPB6 346 aa5.94□□□□□ -1.46
CUX1-208ENST00000485792 ZSCAN32Q9NX65 697 aa5.94□□□□□ -1.46
CUX1-208ENST00000485792 RRN3Q9NYV6 651 aa5.94□□□□□ -1.46
CUX1-208ENST00000485792 SCHIP1Q9P0W5 487 aaPredicted RBP5.94□□□□□ -1.46
CUX1-208ENST00000485792 RASAL2Q9UJF2 1139 aa5.94□□□□□ -1.46
CUX1-208ENST00000485792 LSM7Q9UK45 103 aaKnown RBP5.94□□□□□ -1.46
CUX1-208ENST00000485792 MMP17Q9ULZ9 603 aa5.94□□□□□ -1.46
CUX1-208ENST00000485792 SH3BP1Q9Y3L3 701 aa5.94□□□□□ -1.46
CUX1-208ENST00000485792 PTPRBP23467 1997 aa5.94□□□□□ -1.46
CUX1-208ENST00000485792 GOLGA4Q13439 2230 aaKnown RBP5.94□□□□□ -1.46
CUX1-208ENST00000485792 LRP4O75096 1905 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 SPTBN2O15020 2390 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 A0A1W2PQJ5 194 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 SLC12A8A0AV02 714 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 WASH3PC4AMC7 463 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 NPC1O15118 1278 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 LAMTOR5O43504 91 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 ACSL4O60488 711 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 ATG13O75143 517 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 DAB1O75553 588 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 GFPT2O94808 682 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 CLSTN1O94985 981 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 TRUB2O95900 331 aaKnown RBP5.93□□□□□ -1.46
CUX1-208ENST00000485792 GYPCP04921 128 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 GZMAP12544 262 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 NCAM1P13591 858 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 TCF4P15884 667 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 BCKDHBP21953 392 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 HLA-FP30511 346 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 CNR2P34972 360 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 KRT9P35527 623 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 STAT1P42224 750 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 CXCR3P49682 368 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 PLK1P53350 603 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 METAP1P53582 386 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 NRLP54845 237 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 NRG1Q02297 640 aaPredicted RBP5.93□□□□□ -1.46
CUX1-208ENST00000485792 RAPGEF1Q13905 1077 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 CRY1Q16526 586 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 SLC25A52Q3SY17 297 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 FUT11Q495W5 492 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 PREPLQ4J6C6 727 aaPredicted RBP5.93□□□□□ -1.46
CUX1-208ENST00000485792 FSCBQ5H9T9 825 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 FKBP15Q5T1M5 1219 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 TRIM72Q6ZMU5 477 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 MMS22LQ6ZRQ5 1243 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 MON1BQ7L1V2 547 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 C14orf80Q86SX3 495 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 ADIPOR2Q86V24 386 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 WDR5BQ86VZ2 330 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 CREBRFQ8IUR6 639 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 DENND1CQ8IV53 801 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 DEFB106AQ8N104 65 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 EMC1Q8N766 993 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 ANKRD20A12PQ8NF67 263 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 FIBINQ8TAL6 211 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 SYN2Q92777 582 aaPredicted RBP5.93□□□□□ -1.46
CUX1-208ENST00000485792 EXOC4Q96A65 974 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 C18orf8Q96DM3 657 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 FAM122AQ96E09 287 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 VCPIP1Q96JH7 1222 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 ZC3H10Q96K80 434 aaKnown RBP5.93□□□□□ -1.46
CUX1-208ENST00000485792 BTN2A3PQ96KV6 586 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 C1orf74Q96LT6 269 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 HHIPQ96QV1 700 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 GABRG3Q99928 467 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 MTG2Q9H4K7 406 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 PIGVQ9NUD9 493 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 SPATA6Q9NWH7 488 aaPredicted RBP5.93□□□□□ -1.46
CUX1-208ENST00000485792 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.93□□□□□ -1.46
CUX1-208ENST00000485792 ARHGEF38Q9NXL2 777 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 DEC1Q9P2X7 70 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 STRIP2Q9ULQ0 834 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 ARHGEF17Q96PE2 2063 aaPredicted RBP5.93□□□□□ -1.46
CUX1-208ENST00000485792 KNTC1P50748 2209 aa5.93□□□□□ -1.46
CUX1-208ENST00000485792 MYLKQ15746 1914 aa5.92□□□□□ -1.46
CUX1-208ENST00000485792 IGLV3-10A0A075B6K4 115 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms