RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 YWHAEP62258 255 aaKnown RBP11.13□□□□□ -0.63
DDX56-212ENST00000485367 GOLGA7BQ2TAP0 167 aa11.13□□□□□ -0.63
DDX56-212ENST00000485367 C2orf27AQ580R0 203 aa11.13□□□□□ -0.63
DDX56-212ENST00000485367 C10orf120Q5SQS8 335 aa11.13□□□□□ -0.63
DDX56-212ENST00000485367 LY6G5CQ5SRR4 150 aa11.13□□□□□ -0.63
DDX56-212ENST00000485367 ARHGAP17Q68EM7 881 aa11.13□□□□□ -0.63
DDX56-212ENST00000485367 CEP68Q76N32 757 aa11.13□□□□□ -0.63
DDX56-212ENST00000485367 WDR5BQ86VZ2 330 aa11.13□□□□□ -0.63
DDX56-212ENST00000485367 CCDC63Q8NA47 563 aa11.13□□□□□ -0.63
DDX56-212ENST00000485367 UBLCP1Q8WVY7 318 aaPredicted RBP11.13□□□□□ -0.63
DDX56-212ENST00000485367 MAGOHBQ96A72 148 aaKnown RBP11.13□□□□□ -0.63
DDX56-212ENST00000485367 PGM2Q96G03 612 aa11.13□□□□□ -0.63
DDX56-212ENST00000485367 KLF16Q9BXK1 252 aaPredicted RBP11.13□□□□□ -0.63
DDX56-212ENST00000485367 NSRP1Q9H0G5 558 aaKnown RBP11.13□□□□□ -0.63
DDX56-212ENST00000485367 RAB17Q9H0T7 212 aa11.13□□□□□ -0.63
DDX56-212ENST00000485367 CYLDQ9NQC7 956 aa11.13□□□□□ -0.63
DDX56-212ENST00000485367 HOMER3Q9NSC5 361 aa11.13□□□□□ -0.63
DDX56-212ENST00000485367 GMEB2Q9UKD1 530 aa11.13□□□□□ -0.63
DDX56-212ENST00000485367 UTP11Q9Y3A2 253 aaKnown RBP11.13□□□□□ -0.63
DDX56-212ENST00000485367 SDK1Q7Z5N4 2213 aa11.13□□□□□ -0.63
DDX56-212ENST00000485367 KIAA1549LQ6ZVL6 1849 aa11.13□□□□□ -0.63
DDX56-212ENST00000485367 K7EQS6 105 aa11.12□□□□□ -0.63
DDX56-212ENST00000485367 MDM4O15151 490 aa11.12□□□□□ -0.63
DDX56-212ENST00000485367 TBXAS1P24557 533 aaPredicted RBP11.12□□□□□ -0.63
DDX56-212ENST00000485367 GBP1P32455 592 aa11.12□□□□□ -0.63
DDX56-212ENST00000485367 CNR2P34972 360 aa11.12□□□□□ -0.63
DDX56-212ENST00000485367 KDSRQ06136 332 aa11.12□□□□□ -0.63
DDX56-212ENST00000485367 KLHL30Q0D2K2 578 aa11.12□□□□□ -0.63
DDX56-212ENST00000485367 CETN1Q12798 172 aa11.12□□□□□ -0.63
DDX56-212ENST00000485367 PDCD2Q16342 344 aaPredicted RBP11.12□□□□□ -0.63
DDX56-212ENST00000485367 ASIC2Q16515 512 aa11.12□□□□□ -0.63
DDX56-212ENST00000485367 KRT71Q3SY84 523 aa11.12□□□□□ -0.63
DDX56-212ENST00000485367 PIGWQ7Z7B1 504 aa11.12□□□□□ -0.63
DDX56-212ENST00000485367 SCD5Q86SK9 330 aa11.12□□□□□ -0.63
DDX56-212ENST00000485367 PIGZQ86VD9 579 aa11.12□□□□□ -0.63
DDX56-212ENST00000485367 C12orf40Q86WS4 652 aa11.12□□□□□ -0.63
DDX56-212ENST00000485367 NAT16Q8N8M0 369 aa11.12□□□□□ -0.63
DDX56-212ENST00000485367 GBP7Q8N8V2 638 aaPredicted RBP11.12□□□□□ -0.63
DDX56-212ENST00000485367 LRRC57Q8N9N7 239 aa11.12□□□□□ -0.63
DDX56-212ENST00000485367 ANKRD52Q8NB46 1076 aa11.12□□□□□ -0.63
DDX56-212ENST00000485367 ACDQ96AP0 544 aa11.12□□□□□ -0.63
DDX56-212ENST00000485367 OTUB2Q96DC9 234 aa11.12□□□□□ -0.63
DDX56-212ENST00000485367 NT5C1BQ96P26 610 aa11.12□□□□□ -0.63
DDX56-212ENST00000485367 ZNF317Q96PQ6 595 aaPredicted RBP11.12□□□□□ -0.63
DDX56-212ENST00000485367 HHIPQ96QV1 700 aa11.12□□□□□ -0.63
DDX56-212ENST00000485367 STMN4Q9H169 189 aaPredicted RBP11.12□□□□□ -0.63
DDX56-212ENST00000485367 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.12□□□□□ -0.63
DDX56-212ENST00000485367 CNOT8Q9UFF9 292 aaKnown RBP11.12□□□□□ -0.63
DDX56-212ENST00000485367 CEP250Q9BV73 2442 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 ANTXRLA6NF34 631 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 BUB1BO60566 1050 aaPredicted RBP11.11□□□□□ -0.63
DDX56-212ENST00000485367 APODP05090 189 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 RALAP11233 206 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 PAX7P23759 505 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 GAD2Q05329 585 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 DMC1Q14565 340 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 RBBP5Q15291 538 aaKnown RBP11.11□□□□□ -0.63
DDX56-212ENST00000485367 SPRED3Q2MJR0 410 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 ANO4Q32M45 955 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 SGO2Q562F6 1265 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 BTBD8Q5XKL5 378 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 LAIR1Q6GTX8 287 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 HIBCHQ6NVY1 386 aaPredicted RBP11.11□□□□□ -0.63
DDX56-212ENST00000485367 SYT13Q7L8C5 426 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 SLFN11Q7Z7L1 901 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 TTC30AQ86WT1 665 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 TMEM25Q86YD3 366 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 CCDC33Q8N5R6 958 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 UBA3Q8TBC4 463 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 USP33Q8TEY7 942 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 LSM14BQ9BX40 385 aaKnown RBP11.11□□□□□ -0.63
DDX56-212ENST00000485367 TXLNGYQ9BZA5 131 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 ARHGEF4Q9NR80 690 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 SAMD15Q9P1V8 674 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 DNMT3LQ9UJW3 386 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 LSM7Q9UK45 103 aaKnown RBP11.11□□□□□ -0.63
DDX56-212ENST00000485367 C15orf41Q9Y2V0 281 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 PCDHB4Q9Y5E5 795 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 USP3Q9Y6I4 520 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 RALGAPA1Q6GYQ0 2036 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 SPAG17Q6Q759 2223 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 A0A087X0T9 212 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.11□□□□□ -0.63
DDX56-212ENST00000485367 KRIT1O00522 736 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 PMM2O15305 246 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 CEP104O60308 925 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 COQ9O75208 318 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 RPP40O75818 363 aaKnown RBP11.11□□□□□ -0.63
DDX56-212ENST00000485367 GFPT2O94808 682 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 KAT7O95251 611 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 FAM228BP0C875 321 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 MMP13P45452 471 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 ID4P47928 161 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 TKTL1P51854 596 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 POLR2FP61218 127 aaKnown RBP11.11□□□□□ -0.63
DDX56-212ENST00000485367 MESP2Q0VG99 397 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 PPP1R7Q15435 360 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 TRADDQ15628 312 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 KLHDC10Q6PID8 442 aa11.11□□□□□ -0.63
DDX56-212ENST00000485367 TMEM270Q6UE05 265 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms