RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 KDM1BQ8NB78 822 aa18.33■□□□□ 0.52
SREBF1-213ENST00000485080 ATRIPQ8WXE1 791 aa18.33■□□□□ 0.52
SREBF1-213ENST00000485080 PPP1R9BQ96SB3 815 aa18.33■□□□□ 0.52
SREBF1-213ENST00000485080 CHP1Q99653 195 aa18.33■□□□□ 0.52
SREBF1-213ENST00000485080 RAB6CQ9H0N0 254 aa18.33■□□□□ 0.52
SREBF1-213ENST00000485080 INTS6Q9UL03 887 aaKnown RBP18.33■□□□□ 0.52
SREBF1-213ENST00000485080 GVINP1Q7Z2Y8 2422 aa18.32■□□□□ 0.52
SREBF1-213ENST00000485080 A0A1W2PQF6 199 aa18.32■□□□□ 0.52
SREBF1-213ENST00000485080 E9PAM4 449 aa18.32■□□□□ 0.52
SREBF1-213ENST00000485080 ASLP04424 464 aa18.32■□□□□ 0.52
SREBF1-213ENST00000485080 ATP5BP06576 529 aaKnown RBP18.32■□□□□ 0.52
SREBF1-213ENST00000485080 DLDP09622 509 aaKnown RBP18.32■□□□□ 0.52
SREBF1-213ENST00000485080 POLR2EP19388 210 aaKnown RBP18.32■□□□□ 0.52
SREBF1-213ENST00000485080 PLA2G5P39877 138 aa18.32■□□□□ 0.52
SREBF1-213ENST00000485080 VASPP50552 380 aaPredicted RBP18.32■□□□□ 0.52
SREBF1-213ENST00000485080 ZNF252P-AS1Q0IIN9 211 aa18.32■□□□□ 0.52
SREBF1-213ENST00000485080 FUT11Q495W5 492 aa18.32■□□□□ 0.52
SREBF1-213ENST00000485080 MBLAC2Q68D91 279 aa18.32■□□□□ 0.52
SREBF1-213ENST00000485080 SLFN11Q7Z7L1 901 aa18.32■□□□□ 0.52
SREBF1-213ENST00000485080 TSTD1Q8NFU3 115 aa18.32■□□□□ 0.52
SREBF1-213ENST00000485080 CCDC42Q96M95 316 aa18.32■□□□□ 0.52
SREBF1-213ENST00000485080 ACOX2Q99424 681 aa18.32■□□□□ 0.52
SREBF1-213ENST00000485080 CIPCQ9C0C6 399 aa18.32■□□□□ 0.52
SREBF1-213ENST00000485080 THAP2Q9H0W7 228 aa18.32■□□□□ 0.52
SREBF1-213ENST00000485080 NHEJ1Q9H9Q4 299 aaPredicted RBP18.32■□□□□ 0.52
SREBF1-213ENST00000485080 POLMQ9NP87 494 aaPredicted RBP18.32■□□□□ 0.52
SREBF1-213ENST00000485080 TMPRSS4Q9NRS4 437 aa18.32■□□□□ 0.52
SREBF1-213ENST00000485080 POLR3BQ9NW08 1133 aaPredicted RBP18.32■□□□□ 0.52
SREBF1-213ENST00000485080 ZNF212Q9UDV6 495 aa18.32■□□□□ 0.52
SREBF1-213ENST00000485080 OR12D3Q9UGF7 316 aa18.32■□□□□ 0.52
SREBF1-213ENST00000485080 STON1Q9Y6Q2 735 aa18.32■□□□□ 0.52
SREBF1-213ENST00000485080 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.31■□□□□ 0.52
SREBF1-213ENST00000485080 EIF3CLB5ME19 914 aaKnown RBP18.31■□□□□ 0.52
SREBF1-213ENST00000485080 ALDH1A2O94788 518 aa18.31■□□□□ 0.52
SREBF1-213ENST00000485080 HOXB2P14652 356 aa18.31■□□□□ 0.52
SREBF1-213ENST00000485080 PSMA2P25787 234 aa18.31■□□□□ 0.52
SREBF1-213ENST00000485080 L1CAMP32004 1257 aa18.31■□□□□ 0.52
SREBF1-213ENST00000485080 FNTBP49356 437 aa18.31■□□□□ 0.52
SREBF1-213ENST00000485080 IRAK1P51617 712 aa18.31■□□□□ 0.52
SREBF1-213ENST00000485080 GALCP54803 685 aa18.31■□□□□ 0.52
SREBF1-213ENST00000485080 GFPT1Q06210 699 aaPredicted RBP18.31■□□□□ 0.52
SREBF1-213ENST00000485080 DMWDQ09019 674 aa18.31■□□□□ 0.52
SREBF1-213ENST00000485080 ZNF177Q13360 481 aaPredicted RBP18.31■□□□□ 0.52
SREBF1-213ENST00000485080 ZNF234Q14588 700 aa18.31■□□□□ 0.52
SREBF1-213ENST00000485080 PTPRNQ16849 979 aa18.31■□□□□ 0.52
SREBF1-213ENST00000485080 PLEKHG6Q3KR16 790 aa18.31■□□□□ 0.52
SREBF1-213ENST00000485080 SETD3Q86TU7 594 aaPredicted RBP18.31■□□□□ 0.52
SREBF1-213ENST00000485080 PSTKQ8IV42 348 aaKnown RBP18.31■□□□□ 0.52
SREBF1-213ENST00000485080 CCDC185Q8N715 623 aa18.31■□□□□ 0.52
SREBF1-213ENST00000485080 NIPA2Q8N8Q9 360 aa18.31■□□□□ 0.52
SREBF1-213ENST00000485080 ALG14Q96F25 216 aa18.31■□□□□ 0.52
SREBF1-213ENST00000485080 HHIPQ96QV1 700 aa18.31■□□□□ 0.52
SREBF1-213ENST00000485080 EIF3CQ99613 913 aaKnown RBP18.31■□□□□ 0.52
SREBF1-213ENST00000485080 TMEM245Q9H330 911 aa18.31■□□□□ 0.52
SREBF1-213ENST00000485080 DEF6Q9H4E7 631 aa18.31■□□□□ 0.52
SREBF1-213ENST00000485080 CACNA2D2Q9NY47 1150 aa18.31■□□□□ 0.52
SREBF1-213ENST00000485080 PLA2G4CQ9UP65 541 aa18.31■□□□□ 0.52
SREBF1-213ENST00000485080 OR51B4Q9Y5P0 310 aa18.31■□□□□ 0.52
SREBF1-213ENST00000485080 SNX10Q9Y5X0 201 aa18.31■□□□□ 0.52
SREBF1-213ENST00000485080 ZNF292O60281 2723 aa18.31■□□□□ 0.52
SREBF1-213ENST00000485080 CKAP5Q14008 2032 aa18.3■□□□□ 0.52
SREBF1-213ENST00000485080 AXIN1O15169 862 aa18.3■□□□□ 0.52
SREBF1-213ENST00000485080 AKR1B10O60218 316 aa18.3■□□□□ 0.52
SREBF1-213ENST00000485080 CNTN5O94779 1100 aa18.3■□□□□ 0.52
SREBF1-213ENST00000485080 MOCS3O95396 460 aa18.3■□□□□ 0.52
SREBF1-213ENST00000485080 FECHP22830 423 aa18.3■□□□□ 0.52
SREBF1-213ENST00000485080 CDC25BP30305 580 aa18.3■□□□□ 0.52
SREBF1-213ENST00000485080 HTR7P34969 479 aa18.3■□□□□ 0.52
SREBF1-213ENST00000485080 PCK1P35558 622 aa18.3■□□□□ 0.52
SREBF1-213ENST00000485080 GGCXP38435 758 aa18.3■□□□□ 0.52
SREBF1-213ENST00000485080 CSKP41240 450 aa18.3■□□□□ 0.52
SREBF1-213ENST00000485080 IL12RB1P42701 662 aa18.3■□□□□ 0.52
SREBF1-213ENST00000485080 SULT2A1Q06520 285 aa18.3■□□□□ 0.52
SREBF1-213ENST00000485080 ALFQ53S48 1182 aa18.3■□□□□ 0.52
SREBF1-213ENST00000485080 PITRM1Q5JRX3 1037 aa18.3■□□□□ 0.52
SREBF1-213ENST00000485080 ZNF783Q6ZMS7 281 aa18.3■□□□□ 0.52
SREBF1-213ENST00000485080 CIR1Q86X95 450 aaPredicted RBP18.3■□□□□ 0.52
SREBF1-213ENST00000485080 ARFGAP1Q8N6T3 406 aa18.3■□□□□ 0.52
SREBF1-213ENST00000485080 FAM122AQ96E09 287 aa18.3■□□□□ 0.52
SREBF1-213ENST00000485080 PANX2Q96RD6 677 aa18.3■□□□□ 0.52
SREBF1-213ENST00000485080 FEM1AQ9BSK4 669 aa18.3■□□□□ 0.52
SREBF1-213ENST00000485080 TRIM7Q9C029 511 aa18.3■□□□□ 0.52
SREBF1-213ENST00000485080 ZYG11BQ9C0D3 744 aa18.3■□□□□ 0.52
SREBF1-213ENST00000485080 EPC1Q9H2F5 836 aa18.3■□□□□ 0.52
SREBF1-213ENST00000485080 ZDHHC4Q9NPG8 344 aa18.3■□□□□ 0.52
SREBF1-213ENST00000485080 FAM86C1Q9NVL1 165 aa18.3■□□□□ 0.52
SREBF1-213ENST00000485080 UVRAGQ9P2Y5 699 aa18.3■□□□□ 0.52
SREBF1-213ENST00000485080 MYO1AQ9UBC5 1043 aa18.3■□□□□ 0.52
SREBF1-213ENST00000485080 FZD10Q9ULW2 581 aa18.3■□□□□ 0.52
SREBF1-213ENST00000485080 R4GN57 208 aa18.3■□□□□ 0.52
SREBF1-213ENST00000485080 SPAG17Q6Q759 2223 aa18.29■□□□□ 0.52
SREBF1-213ENST00000485080 RNF8O76064 485 aa18.29■□□□□ 0.52
SREBF1-213ENST00000485080 SRPRAP08240 638 aaKnown RBP18.29■□□□□ 0.52
SREBF1-213ENST00000485080 H2AFZP0C0S5 128 aa18.29■□□□□ 0.52
SREBF1-213ENST00000485080 HOXC13P31276 330 aa18.29■□□□□ 0.52
SREBF1-213ENST00000485080 SEMA3BQ13214 749 aa18.29■□□□□ 0.52
SREBF1-213ENST00000485080 PIGHQ14442 188 aaPredicted RBP18.29■□□□□ 0.52
SREBF1-213ENST00000485080 EFHC2Q5JST6 749 aa18.29■□□□□ 0.52
SREBF1-213ENST00000485080 H2AFVQ71UI9 128 aa18.29■□□□□ 0.52
SREBF1-213ENST00000485080 SORCS1Q8WY21 1168 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms