RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 PDCLQ13371 301 aa11.85□□□□□ -0.51
SCFD1-206ENST00000484733 CST6Q15828 149 aa11.85□□□□□ -0.51
SCFD1-206ENST00000484733 EFHC1Q5JVL4 640 aa11.85□□□□□ -0.51
SCFD1-206ENST00000484733 RAP1GAP2Q684P5 730 aa11.85□□□□□ -0.51
SCFD1-206ENST00000484733 CCNI2Q6ZMN8 369 aaPredicted RBP11.85□□□□□ -0.51
SCFD1-206ENST00000484733 SLCO6A1Q86UG4 719 aa11.85□□□□□ -0.51
SCFD1-206ENST00000484733 CHSY1Q86X52 802 aa11.85□□□□□ -0.51
SCFD1-206ENST00000484733 CFAP52Q8N1V2 620 aa11.85□□□□□ -0.51
SCFD1-206ENST00000484733 WDTC1Q8N5D0 677 aa11.85□□□□□ -0.51
SCFD1-206ENST00000484733 ADAM32Q8TC27 787 aa11.85□□□□□ -0.51
SCFD1-206ENST00000484733 SHC3Q92529 594 aa11.85□□□□□ -0.51
SCFD1-206ENST00000484733 FAM129BQ96TA1 746 aa11.85□□□□□ -0.51
SCFD1-206ENST00000484733 MTG2Q9H4K7 406 aa11.85□□□□□ -0.51
SCFD1-206ENST00000484733 FBXL12Q9NXK8 326 aa11.85□□□□□ -0.51
SCFD1-206ENST00000484733 APEX2Q9UBZ4 518 aa11.85□□□□□ -0.51
SCFD1-206ENST00000484733 XPO7Q9UIA9 1087 aaKnown RBP11.85□□□□□ -0.51
SCFD1-206ENST00000484733 SNX11Q9Y5W9 270 aa11.85□□□□□ -0.51
SCFD1-206ENST00000484733 SLCO1B1Q9Y6L6 691 aa11.85□□□□□ -0.51
SCFD1-206ENST00000484733 NYNRINQ9P2P1 1898 aaKnown RBP11.84□□□□□ -0.51
SCFD1-206ENST00000484733 F5H5T6 163 aa11.84□□□□□ -0.51
SCFD1-206ENST00000484733 PCDHGA12O60330 932 aa11.84□□□□□ -0.51
SCFD1-206ENST00000484733 FSBPO95073 299 aa11.84□□□□□ -0.51
SCFD1-206ENST00000484733 MOCS2O96007 188 aaPredicted RBP11.84□□□□□ -0.51
SCFD1-206ENST00000484733 SLC9A1P19634 815 aa11.84□□□□□ -0.51
SCFD1-206ENST00000484733 CTSKP43235 329 aa11.84□□□□□ -0.51
SCFD1-206ENST00000484733 CCR5P51681 352 aa11.84□□□□□ -0.51
SCFD1-206ENST00000484733 GALCP54803 685 aa11.84□□□□□ -0.51
SCFD1-206ENST00000484733 RACK1P63244 317 aaKnown RBP11.84□□□□□ -0.51
SCFD1-206ENST00000484733 CDK17Q00537 523 aa11.84□□□□□ -0.51
SCFD1-206ENST00000484733 DHX40Q8IX18 779 aaKnown RBP11.84□□□□□ -0.51
SCFD1-206ENST00000484733 SETD7Q8WTS6 366 aaKnown RBP11.84□□□□□ -0.51
SCFD1-206ENST00000484733 A0A1W2PPC4 97 aa11.83□□□□□ -0.51
SCFD1-206ENST00000484733 VILLO15195 856 aa11.83□□□□□ -0.51
SCFD1-206ENST00000484733 ADH1BP00325 375 aa11.83□□□□□ -0.51
SCFD1-206ENST00000484733 PRKCSHP14314 528 aaPredicted RBP11.83□□□□□ -0.51
SCFD1-206ENST00000484733 GOT1P17174 413 aa11.83□□□□□ -0.51
SCFD1-206ENST00000484733 CTSOP43234 321 aaPredicted RBP11.83□□□□□ -0.51
SCFD1-206ENST00000484733 SNX16P57768 344 aa11.83□□□□□ -0.51
SCFD1-206ENST00000484733 EXOC3L4Q17RC7 722 aa11.83□□□□□ -0.51
SCFD1-206ENST00000484733 GJB7Q6PEY0 223 aa11.83□□□□□ -0.51
SCFD1-206ENST00000484733 IRF2BP1Q8IU81 584 aa11.83□□□□□ -0.51
SCFD1-206ENST00000484733 APCDD1Q8J025 514 aa11.83□□□□□ -0.51
SCFD1-206ENST00000484733 OR2T34Q8NGX1 318 aa11.83□□□□□ -0.51
SCFD1-206ENST00000484733 FAM131CQ96AQ9 280 aa11.83□□□□□ -0.51
SCFD1-206ENST00000484733 PPP1R9BQ96SB3 815 aa11.83□□□□□ -0.51
SCFD1-206ENST00000484733 NEUROG2Q9H2A3 272 aa11.83□□□□□ -0.51
SCFD1-206ENST00000484733 TMEM51Q9NW97 253 aa11.83□□□□□ -0.51
SCFD1-206ENST00000484733 LRRC72A6NJI9 287 aa11.83□□□□□ -0.52
SCFD1-206ENST00000484733 TTC34A8MYJ7 566 aa11.83□□□□□ -0.52
SCFD1-206ENST00000484733 MID1O15344 667 aa11.83□□□□□ -0.52
SCFD1-206ENST00000484733 HSF2BPO75031 334 aa11.83□□□□□ -0.52
SCFD1-206ENST00000484733 C5AR1P21730 350 aa11.83□□□□□ -0.52
SCFD1-206ENST00000484733 PON1P27169 355 aa11.83□□□□□ -0.52
SCFD1-206ENST00000484733 CCR1P32246 355 aa11.83□□□□□ -0.52
SCFD1-206ENST00000484733 SLC8A1P32418 973 aa11.83□□□□□ -0.52
SCFD1-206ENST00000484733 CCT8P50990 548 aa11.83□□□□□ -0.52
SCFD1-206ENST00000484733 UBE2HP62256 183 aa11.83□□□□□ -0.52
SCFD1-206ENST00000484733 PITX1P78337 314 aaPredicted RBP11.83□□□□□ -0.52
SCFD1-206ENST00000484733 RABGAP1LQ5R372 815 aa11.83□□□□□ -0.52
SCFD1-206ENST00000484733 MMS22LQ6ZRQ5 1243 aa11.83□□□□□ -0.52
SCFD1-206ENST00000484733 C11orf57Q6ZUT1 292 aaPredicted RBP11.83□□□□□ -0.52
SCFD1-206ENST00000484733 SND1Q7KZF4 910 aaKnown RBP eCLIP11.83□□□□□ -0.52
SCFD1-206ENST00000484733 DEFB106AQ8N104 65 aa11.83□□□□□ -0.52
SCFD1-206ENST00000484733 ZNF397Q8NF99 534 aaPredicted RBP11.83□□□□□ -0.52
SCFD1-206ENST00000484733 RHBDD1Q8TEB9 315 aa11.83□□□□□ -0.52
SCFD1-206ENST00000484733 PTPRN2Q92932 1015 aa11.83□□□□□ -0.52
SCFD1-206ENST00000484733 PPP1R13BQ96KQ4 1090 aa11.83□□□□□ -0.52
SCFD1-206ENST00000484733 CRACR2AQ9BSW2 395 aa11.83□□□□□ -0.52
SCFD1-206ENST00000484733 TOR4AQ9NXH8 423 aa11.83□□□□□ -0.52
SCFD1-206ENST00000484733 SLCO3A1Q9UIG8 710 aa11.83□□□□□ -0.52
SCFD1-206ENST00000484733 NUMA1Q14980 2115 aa11.83□□□□□ -0.52
SCFD1-206ENST00000484733 PLXNA2O75051 1894 aa11.82□□□□□ -0.52
SCFD1-206ENST00000484733 TMEM131Q92545 1883 aa11.82□□□□□ -0.52
SCFD1-206ENST00000484733 A0A1B0GVM2 712 aa11.82□□□□□ -0.52
SCFD1-206ENST00000484733 TCAF2A6NFQ2 919 aa11.82□□□□□ -0.52
SCFD1-206ENST00000484733 ABCB4P21439 1286 aa11.82□□□□□ -0.52
SCFD1-206ENST00000484733 NNMTP40261 264 aa11.82□□□□□ -0.52
SCFD1-206ENST00000484733 TAF5Q15542 800 aa11.82□□□□□ -0.52
SCFD1-206ENST00000484733 ARHGAP44Q17R89 818 aa11.82□□□□□ -0.52
SCFD1-206ENST00000484733 C5orf22Q49AR2 442 aa11.82□□□□□ -0.52
SCFD1-206ENST00000484733 RNF219Q5W0B1 726 aaPredicted RBP11.82□□□□□ -0.52
SCFD1-206ENST00000484733 TMPRSS7Q7RTY8 843 aa11.82□□□□□ -0.52
SCFD1-206ENST00000484733 MMAAQ8IVH4 418 aaKnown RBP11.82□□□□□ -0.52
SCFD1-206ENST00000484733 CCAR2Q8N163 923 aaKnown RBP11.82□□□□□ -0.52
SCFD1-206ENST00000484733 MLKLQ8NB16 471 aa11.82□□□□□ -0.52
SCFD1-206ENST00000484733 GANCQ8TET4 914 aa11.82□□□□□ -0.52
SCFD1-206ENST00000484733 SKA1Q96BD8 255 aa11.82□□□□□ -0.52
SCFD1-206ENST00000484733 NOX5Q96PH1 765 aa11.82□□□□□ -0.52
SCFD1-206ENST00000484733 CPXM1Q96SM3 734 aa11.82□□□□□ -0.52
SCFD1-206ENST00000484733 SIX2Q9NPC8 291 aa11.82□□□□□ -0.52
SCFD1-206ENST00000484733 ACP6Q9NPH0 428 aa11.82□□□□□ -0.52
SCFD1-206ENST00000484733 RRN3Q9NYV6 651 aa11.82□□□□□ -0.52
SCFD1-206ENST00000484733 SERGEFQ9UGK8 458 aa11.82□□□□□ -0.52
SCFD1-206ENST00000484733 PLXNB3Q9ULL4 1909 aa11.82□□□□□ -0.52
SCFD1-206ENST00000484733 A0A1W2PP55 124 aa11.82□□□□□ -0.52
SCFD1-206ENST00000484733 GRK6P43250 576 aa11.82□□□□□ -0.52
SCFD1-206ENST00000484733 PTK2Q05397 1052 aa11.82□□□□□ -0.52
SCFD1-206ENST00000484733 NCEH1Q6PIU2 408 aa11.82□□□□□ -0.52
SCFD1-206ENST00000484733 SLC26A9Q7LBE3 791 aa11.82□□□□□ -0.52
SCFD1-206ENST00000484733 STK40Q8N2I9 435 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms