RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 KPNA1P52294 538 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-216ENST00000484087 ZNF143P52747 638 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-216ENST00000484087 SLC6A3Q01959 620 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 MESP2Q0VG99 397 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 GAS6Q14393 721 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 ANGPT1Q15389 498 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 CCNG2Q16589 344 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 TFDP3Q5H9I0 405 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 FAM183BPQ6ZVS7 135 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 TMEM110Q86TL2 294 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 CPNE8Q86YQ8 564 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 MAP7D3Q8IWC1 876 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 MAML2Q8IZL2 1156 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-216ENST00000484087 MREGQ8N565 214 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 CELF5Q8N6W0 485 aaKnown RBP7.17□□□□□ -1.26
BRCA1-216ENST00000484087 DTWD2Q8NBA8 298 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 BBOF1Q8ND07 529 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 ATL2Q8NHH9 583 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 JOSD2Q8TAC2 188 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 FAM71BQ8TC56 605 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 CCHCR1Q8TD31 782 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 CSGALNACT1Q8TDX6 532 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 CLEC4CQ8WTT0 213 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 SLC35F5Q8WV83 523 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 SEC14L1Q92503 715 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 FAM3CQ92520 227 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 DNASE1L2Q92874 299 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 SLCO2A1Q92959 643 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 IRF7Q92985 503 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 ERLEC1Q96DZ1 483 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 FAM122AQ96E09 287 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 GDAP1L1Q96MZ0 367 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 SLITRK1Q96PX8 696 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 FMO2Q99518 471 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 DDX23Q9BUQ8 820 aaKnown RBP7.17□□□□□ -1.26
BRCA1-216ENST00000484087 MAK16Q9BXY0 300 aaKnown RBP7.17□□□□□ -1.26
BRCA1-216ENST00000484087 FRMD8P1Q9BZ68 369 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-216ENST00000484087 TRIM31Q9BZY9 425 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 DPH5Q9H2P9 285 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 TRPM5Q9NZQ8 1165 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 UXTQ9UBK9 157 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-216ENST00000484087 CYTH4Q9UIA0 394 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 HPCAL4Q9UM19 191 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 EFR3BQ9Y2G0 817 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 R4GN57 208 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 DMXL1Q9Y485 3027 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 GOLGA6L10A6NI86 522 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 SMAPO00193 183 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 XPO1O14980 1071 aaKnown RBP7.17□□□□□ -1.26
BRCA1-216ENST00000484087 LRCH4O75427 683 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 FGF19O95750 216 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 HMBSP08397 361 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 USP17L7P0C7H9 530 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 CLCN5P51795 746 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 PFKPQ01813 784 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 OGDHQ02218 1023 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 CAV1Q03135 178 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 PRKCQQ04759 706 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 DMWDQ09019 674 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 SNX1Q13596 522 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 PKDCCQ504Y2 493 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 BOLA3Q53S33 107 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 EFHC1Q5JVL4 640 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 DAB2IPQ5VWQ8 1189 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 KAZNQ674X7 775 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 DUPD1Q68J44 220 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 PMF1Q6P1K2 205 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 SPOCD1Q6ZMY3 1216 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 CEP128Q6ZU80 1094 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 GSTA5Q7RTV2 222 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 SCD5Q86SK9 330 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 ALYREFQ86V81 257 aaKnown RBP7.17□□□□□ -1.26
BRCA1-216ENST00000484087 PIGZQ86VD9 579 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 C12orf40Q86WS4 652 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 SIX6OS1Q8N1H7 587 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 EMC1Q8N766 993 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 CCDC89Q8N998 374 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 KCTD6Q8NC69 237 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 C1orf54Q8WWF1 131 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 RXFP2Q8WXD0 754 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 EZH1Q92800 747 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-216ENST00000484087 ATOH1Q92858 354 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-216ENST00000484087 P2RY11Q96G91 374 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 HNRNPABQ99729 332 aaKnown RBP7.17□□□□□ -1.26
BRCA1-216ENST00000484087 FAM83CQ9BQN1 747 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 TRIM51Q9BSJ1 452 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 HEMGNQ9BXL5 484 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 DUSP16Q9BY84 665 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 DCLK3Q9C098 648 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 TSPYL1Q9H0U9 437 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 ZWILCHQ9H900 591 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 LRRC4Q9HBW1 653 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 CSNK1G1Q9HCP0 422 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 SPATA6Q9NWH7 488 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-216ENST00000484087 DUS2Q9NX74 493 aaKnown RBP7.17□□□□□ -1.26
BRCA1-216ENST00000484087 CFAP97Q9P2B7 532 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 TJP2Q9UDY2 1190 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 ASIC3Q9UHC3 531 aa7.17□□□□□ -1.26
BRCA1-216ENST00000484087 TCRBV7S2A1N4TA0A589 114 aa7.16□□□□□ -1.26
BRCA1-216ENST00000484087 C2CD4BA6NLJ0 364 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms