RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 AFMP43652 599 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 RAD23BP54727 409 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 DAB2P98082 770 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 ADIGQ0VDE8 80 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 SFSWAPQ12872 951 aaKnown RBP11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 STK4Q13043 487 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 ZNF211Q13398 564 aaPredicted RBP11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 ARID5BQ14865 1188 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 STK38Q15208 465 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 FSCBQ5H9T9 825 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 MPP7Q5T2T1 576 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 BSPRYQ5W0U4 402 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 CEP135Q66GS9 1140 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 TBC1D3GQ6DHY5 549 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 NADSYN1Q6IA69 706 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 TBC1D3CQ6IPX1 549 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 SND1Q7KZF4 910 aaKnown RBP eCLIP11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 TMC6Q7Z403 805 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 MFN1Q8IWA4 741 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 TBC1D3Q8IZP1 549 aaPredicted RBP11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 STK40Q8N2I9 435 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 LINC00301Q8NCQ3 95 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 FIBINQ8TAL6 211 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 RNF139Q8WU17 664 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 TATDN2Q93075 761 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 VCPIP1Q96JH7 1222 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 IMPG2Q9BZV3 1241 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 TRIM4Q9C037 500 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 OLA1Q9NTK5 396 aaKnown RBP11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 ERVW-1Q9UQF0 538 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 SSUH2Q9Y2M2 353 aa11.28□□□□□ -0.6
SMARCC1-205ENST00000483847 COL27A1Q8IZC6 1860 aaPredicted RBP11.27□□□□□ -0.6
SMARCC1-205ENST00000483847 PVALEFA0A1B0GWK0 134 aa11.27□□□□□ -0.61
SMARCC1-205ENST00000483847 A0A1W2PNU3 283 aaPredicted RBP11.27□□□□□ -0.61
SMARCC1-205ENST00000483847 TARSL2A2RTX5 802 aaKnown RBP11.27□□□□□ -0.61
SMARCC1-205ENST00000483847 POLR2DO15514 142 aaKnown RBP11.27□□□□□ -0.61
SMARCC1-205ENST00000483847 FFAR2O15552 330 aa11.27□□□□□ -0.61
SMARCC1-205ENST00000483847 RTN2O75298 545 aa11.27□□□□□ -0.61
SMARCC1-205ENST00000483847 CSO75390 466 aaKnown RBP11.27□□□□□ -0.61
SMARCC1-205ENST00000483847 IGLV3-27P01718 113 aa11.27□□□□□ -0.61
SMARCC1-205ENST00000483847 ASLP04424 464 aa11.27□□□□□ -0.61
SMARCC1-205ENST00000483847 GIMD1P0DJR0 217 aa11.27□□□□□ -0.61
SMARCC1-205ENST00000483847 VAV1P15498 845 aa11.27□□□□□ -0.61
SMARCC1-205ENST00000483847 PDCP20941 246 aa11.27□□□□□ -0.61
SMARCC1-205ENST00000483847 C5AR1P21730 350 aa11.27□□□□□ -0.61
SMARCC1-205ENST00000483847 LSSP48449 732 aa11.27□□□□□ -0.61
SMARCC1-205ENST00000483847 NUMBP49757 651 aa11.27□□□□□ -0.61
SMARCC1-205ENST00000483847 VAMP7P51809 220 aa11.27□□□□□ -0.61
SMARCC1-205ENST00000483847 ERVPABLB-1P60509 514 aa11.27□□□□□ -0.61
SMARCC1-205ENST00000483847 RPS24P62847 133 aaKnown RBP11.27□□□□□ -0.61
SMARCC1-205ENST00000483847 GOLGA7BQ2TAP0 167 aa11.27□□□□□ -0.61
SMARCC1-205ENST00000483847 PITRM1Q5JRX3 1037 aa11.27□□□□□ -0.61
SMARCC1-205ENST00000483847 ARHGAP17Q68EM7 881 aa11.27□□□□□ -0.61
SMARCC1-205ENST00000483847 PRICKLE2Q7Z3G6 844 aa11.27□□□□□ -0.61
SMARCC1-205ENST00000483847 ANKRD52Q8NB46 1076 aa11.27□□□□□ -0.61
SMARCC1-205ENST00000483847 TMEM174Q8WUU8 243 aa11.27□□□□□ -0.61
SMARCC1-205ENST00000483847 PTPRN2Q92932 1015 aa11.27□□□□□ -0.61
SMARCC1-205ENST00000483847 MMRN2Q9H8L6 949 aa11.27□□□□□ -0.61
SMARCC1-205ENST00000483847 POLR1BQ9H9Y6 1135 aa11.27□□□□□ -0.61
SMARCC1-205ENST00000483847 CISHQ9NSE2 258 aa11.27□□□□□ -0.61
SMARCC1-205ENST00000483847 CYTH4Q9UIA0 394 aa11.27□□□□□ -0.61
SMARCC1-205ENST00000483847 MTMR6Q9Y217 621 aa11.27□□□□□ -0.61
SMARCC1-205ENST00000483847 EDDM13A0A1B0GTR0 161 aa11.26□□□□□ -0.61
SMARCC1-205ENST00000483847 PMS2P1A4D2B8 440 aa11.26□□□□□ -0.61
SMARCC1-205ENST00000483847 PDXKO00764 312 aa11.26□□□□□ -0.61
SMARCC1-205ENST00000483847 SPTLC2O15270 562 aa11.26□□□□□ -0.61
SMARCC1-205ENST00000483847 KLRC4O43908 158 aa11.26□□□□□ -0.61
SMARCC1-205ENST00000483847 ACSL4O60488 711 aa11.26□□□□□ -0.61
SMARCC1-205ENST00000483847 ADH1BP00325 375 aa11.26□□□□□ -0.61
SMARCC1-205ENST00000483847 IL1BP01584 269 aa11.26□□□□□ -0.61
SMARCC1-205ENST00000483847 DGKAP23743 735 aa11.26□□□□□ -0.61
SMARCC1-205ENST00000483847 MZF1P28698 734 aaPredicted RBP11.26□□□□□ -0.61
SMARCC1-205ENST00000483847 STK19P49842 368 aaPredicted RBP11.26□□□□□ -0.61
SMARCC1-205ENST00000483847 CUL4AQ13619 759 aa11.26□□□□□ -0.61
SMARCC1-205ENST00000483847 POM121L1PQ3SYA9 428 aa11.26□□□□□ -0.61
SMARCC1-205ENST00000483847 PRPF39Q86UA1 669 aaKnown RBP11.26□□□□□ -0.61
SMARCC1-205ENST00000483847 IQCHQ86VS3 1027 aa11.26□□□□□ -0.61
SMARCC1-205ENST00000483847 LSMEM2Q8N112 164 aa11.26□□□□□ -0.61
SMARCC1-205ENST00000483847 CFAP52Q8N1V2 620 aa11.26□□□□□ -0.61
SMARCC1-205ENST00000483847 CARNMT1Q8N4J0 409 aa11.26□□□□□ -0.61
SMARCC1-205ENST00000483847 KDM1BQ8NB78 822 aa11.26□□□□□ -0.61
SMARCC1-205ENST00000483847 HJURPQ8NCD3 748 aaPredicted RBP11.26□□□□□ -0.61
SMARCC1-205ENST00000483847 OR4C6Q8NH72 309 aa11.26□□□□□ -0.61
SMARCC1-205ENST00000483847 SEMA4DQ92854 862 aa11.26□□□□□ -0.61
SMARCC1-205ENST00000483847 FAM131CQ96AQ9 280 aa11.26□□□□□ -0.61
SMARCC1-205ENST00000483847 RPL10LQ96L21 214 aaKnown RBP11.26□□□□□ -0.61
SMARCC1-205ENST00000483847 IPO9Q96P70 1041 aaKnown RBP11.26□□□□□ -0.61
SMARCC1-205ENST00000483847 DEPDC7Q96QD5 511 aa11.26□□□□□ -0.61
SMARCC1-205ENST00000483847 DPH1Q9BZG8 443 aa11.26□□□□□ -0.61
SMARCC1-205ENST00000483847 OSBPL2Q9H1P3 480 aa11.26□□□□□ -0.61
SMARCC1-205ENST00000483847 LRRC4Q9HBW1 653 aa11.26□□□□□ -0.61
SMARCC1-205ENST00000483847 ITIH6Q6UXX5 1313 aa11.26□□□□□ -0.61
SMARCC1-205ENST00000483847 TDRD6O60522 2096 aaKnown RBP11.26□□□□□ -0.61
SMARCC1-205ENST00000483847 TLN1Q9Y490 2541 aaKnown RBP11.25□□□□□ -0.61
SMARCC1-205ENST00000483847 LY6G6EA0A0G2JKS1 128 aa11.25□□□□□ -0.61
SMARCC1-205ENST00000483847 K7ENP7 123 aa11.25□□□□□ -0.61
SMARCC1-205ENST00000483847 XPO1O14980 1071 aaKnown RBP11.25□□□□□ -0.61
SMARCC1-205ENST00000483847 IRAK2O43187 625 aa11.25□□□□□ -0.61
SMARCC1-205ENST00000483847 PPP6R2O75170 966 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms