RNA–Protein interactions for RNA: ENST00000483002.1

RAB11FIP3-209, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 4

Gene RAB11FIP3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-209ENST00000483002 GLRX5Q86SX6 157 aa17.14■□□□□ 0.33
RAB11FIP3-209ENST00000483002 MMAAQ8IVH4 418 aaKnown RBP17.14■□□□□ 0.33
RAB11FIP3-209ENST00000483002 APCDD1Q8J025 514 aa17.14■□□□□ 0.33
RAB11FIP3-209ENST00000483002 BTN2A3PQ96KV6 586 aa17.14■□□□□ 0.33
RAB11FIP3-209ENST00000483002 RPL10LQ96L21 214 aaKnown RBP17.14■□□□□ 0.33
RAB11FIP3-209ENST00000483002 OMDQ99983 421 aa17.14■□□□□ 0.33
RAB11FIP3-209ENST00000483002 NEUROG2Q9H2A3 272 aa17.14■□□□□ 0.33
RAB11FIP3-209ENST00000483002 OSGEPQ9NPF4 335 aa17.14■□□□□ 0.33
RAB11FIP3-209ENST00000483002 SERGEFQ9UGK8 458 aa17.14■□□□□ 0.33
RAB11FIP3-209ENST00000483002 SLC12A6Q9UHW9 1150 aa17.14■□□□□ 0.33
RAB11FIP3-209ENST00000483002 PCDHGB2Q9Y5G2 931 aa17.14■□□□□ 0.33
RAB11FIP3-209ENST00000483002 ZFHX4Q86UP3 3567 aa17.14■□□□□ 0.33
RAB11FIP3-209ENST00000483002 ASPMQ8IZT6 3477 aa17.13■□□□□ 0.33
RAB11FIP3-209ENST00000483002 SYNJ2BP-COX16A0A087WUM0 186 aa17.13■□□□□ 0.33
RAB11FIP3-209ENST00000483002 A0A1W2PP55 124 aa17.13■□□□□ 0.33
RAB11FIP3-209ENST00000483002 BECN2A8MW95 431 aa17.13■□□□□ 0.33
RAB11FIP3-209ENST00000483002 KCNU1A8MYU2 1149 aa17.13■□□□□ 0.33
RAB11FIP3-209ENST00000483002 F5H5T6 163 aa17.13■□□□□ 0.33
RAB11FIP3-209ENST00000483002 FLRT2O43155 660 aa17.13■□□□□ 0.33
RAB11FIP3-209ENST00000483002 RNASEH2AO75792 299 aaKnown RBP17.13■□□□□ 0.33
RAB11FIP3-209ENST00000483002 SRPRAP08240 638 aaKnown RBP17.13■□□□□ 0.33
RAB11FIP3-209ENST00000483002 SLC8A1P32418 973 aa17.13■□□□□ 0.33
RAB11FIP3-209ENST00000483002 GALCP54803 685 aa17.13■□□□□ 0.33
RAB11FIP3-209ENST00000483002 SFSWAPQ12872 951 aaKnown RBP17.13■□□□□ 0.33
RAB11FIP3-209ENST00000483002 PDCLQ13371 301 aa17.13■□□□□ 0.33
RAB11FIP3-209ENST00000483002 CST6Q15828 149 aa17.13■□□□□ 0.33
RAB11FIP3-209ENST00000483002 RNF219Q5W0B1 726 aaPredicted RBP17.13■□□□□ 0.33
RAB11FIP3-209ENST00000483002 KIAA0895LQ68EN5 471 aa17.13■□□□□ 0.33
RAB11FIP3-209ENST00000483002 DBX2Q6ZNG2 339 aa17.13■□□□□ 0.33
RAB11FIP3-209ENST00000483002 ATP6V0D2Q8N8Y2 350 aa17.13■□□□□ 0.33
RAB11FIP3-209ENST00000483002 KDM1BQ8NB78 822 aa17.13■□□□□ 0.33
RAB11FIP3-209ENST00000483002 RNF34Q969K3 372 aa17.13■□□□□ 0.33
RAB11FIP3-209ENST00000483002 FAM81BQ96LP2 452 aa17.13■□□□□ 0.33
RAB11FIP3-209ENST00000483002 CDC6Q99741 560 aa17.13■□□□□ 0.33
RAB11FIP3-209ENST00000483002 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.13■□□□□ 0.33
RAB11FIP3-209ENST00000483002 COX16Q9P0S2 106 aa17.13■□□□□ 0.33
RAB11FIP3-209ENST00000483002 RWDD2AQ9UIY3 292 aa17.13■□□□□ 0.33
RAB11FIP3-209ENST00000483002 EDDM13A0A1B0GTR0 161 aa17.12■□□□□ 0.33
RAB11FIP3-209ENST00000483002 TARSL2A2RTX5 802 aaKnown RBP17.12■□□□□ 0.33
RAB11FIP3-209ENST00000483002 GOLGA8CPA6NN73 597 aa17.12■□□□□ 0.33
RAB11FIP3-209ENST00000483002 IGLV3-25P01717 112 aa17.12■□□□□ 0.33
RAB11FIP3-209ENST00000483002 IGHV4-34P06331 123 aa17.12■□□□□ 0.33
RAB11FIP3-209ENST00000483002 ATXN1LP0C7T5 689 aaKnown RBP17.12■□□□□ 0.33
RAB11FIP3-209ENST00000483002 CDK17Q00537 523 aa17.12■□□□□ 0.33
RAB11FIP3-209ENST00000483002 ARID5BQ14865 1188 aa17.12■□□□□ 0.33
RAB11FIP3-209ENST00000483002 KCNT1Q5JUK3 1230 aa17.12■□□□□ 0.33
RAB11FIP3-209ENST00000483002 NCEH1Q6PIU2 408 aa17.12■□□□□ 0.33
RAB11FIP3-209ENST00000483002 GBP6Q6ZN66 633 aa17.12■□□□□ 0.33
RAB11FIP3-209ENST00000483002 CIR1Q86X95 450 aaPredicted RBP17.12■□□□□ 0.33
RAB11FIP3-209ENST00000483002 PASD1Q8IV76 773 aa17.12■□□□□ 0.33
RAB11FIP3-209ENST00000483002 DEFB106AQ8N104 65 aa17.12■□□□□ 0.33
RAB11FIP3-209ENST00000483002 STK40Q8N2I9 435 aa17.12■□□□□ 0.33
RAB11FIP3-209ENST00000483002 WDTC1Q8N5D0 677 aa17.12■□□□□ 0.33
RAB11FIP3-209ENST00000483002 PPP1R13BQ96KQ4 1090 aa17.12■□□□□ 0.33
RAB11FIP3-209ENST00000483002 CPXM1Q96SM3 734 aa17.12■□□□□ 0.33
RAB11FIP3-209ENST00000483002 FAM129BQ96TA1 746 aa17.12■□□□□ 0.33
RAB11FIP3-209ENST00000483002 ORAI3Q9BRQ5 295 aa17.12■□□□□ 0.33
RAB11FIP3-209ENST00000483002 FAM204AQ9H8W3 233 aa17.12■□□□□ 0.33
RAB11FIP3-209ENST00000483002 DDIT4Q9NX09 232 aa17.12■□□□□ 0.33
RAB11FIP3-209ENST00000483002 KIAA1468Q9P260 1216 aa17.12■□□□□ 0.33
RAB11FIP3-209ENST00000483002 BTBD3Q9Y2F9 522 aa17.12■□□□□ 0.33
RAB11FIP3-209ENST00000483002 PKD1L2Q7Z442 2459 aa17.12■□□□□ 0.33
RAB11FIP3-209ENST00000483002 TMEM131Q92545 1883 aa17.12■□□□□ 0.33
RAB11FIP3-209ENST00000483002 H0Y8X5 98 aa17.11■□□□□ 0.33
RAB11FIP3-209ENST00000483002 GRAP2O75791 330 aa17.11■□□□□ 0.33
RAB11FIP3-209ENST00000483002 PDGFRAP16234 1089 aa17.11■□□□□ 0.33
RAB11FIP3-209ENST00000483002 ABCB4P21439 1286 aa17.11■□□□□ 0.33
RAB11FIP3-209ENST00000483002 NNMTP40261 264 aa17.11■□□□□ 0.33
RAB11FIP3-209ENST00000483002 PSMD8P48556 350 aa17.11■□□□□ 0.33
RAB11FIP3-209ENST00000483002 STK19P49842 368 aaPredicted RBP17.11■□□□□ 0.33
RAB11FIP3-209ENST00000483002 C21orf59P57076 290 aa17.11■□□□□ 0.33
RAB11FIP3-209ENST00000483002 SCAPQ12770 1279 aa17.11■□□□□ 0.33
RAB11FIP3-209ENST00000483002 EXOC3L4Q17RC7 722 aa17.11■□□□□ 0.33
RAB11FIP3-209ENST00000483002 PRAMEF14Q5SWL7 426 aa17.11■□□□□ 0.33
RAB11FIP3-209ENST00000483002 CCNI2Q6ZMN8 369 aaPredicted RBP17.11■□□□□ 0.33
RAB11FIP3-209ENST00000483002 CCAR2Q8N163 923 aaKnown RBP17.11■□□□□ 0.33
RAB11FIP3-209ENST00000483002 BAHD1Q8TBE0 780 aaPredicted RBP17.11■□□□□ 0.33
RAB11FIP3-209ENST00000483002 PTPRN2Q92932 1015 aa17.11■□□□□ 0.33
RAB11FIP3-209ENST00000483002 IGSF8Q969P0 613 aa17.11■□□□□ 0.33
RAB11FIP3-209ENST00000483002 APEX2Q9UBZ4 518 aa17.11■□□□□ 0.33
RAB11FIP3-209ENST00000483002 ZZEF1O43149 2961 aa17.11■□□□□ 0.33
RAB11FIP3-209ENST00000483002 ZFYVE26Q68DK2 2539 aa17.11■□□□□ 0.33
RAB11FIP3-209ENST00000483002 KNTC1P50748 2209 aa17.11■□□□□ 0.33
RAB11FIP3-209ENST00000483002 SPEGQ15772 3267 aa17.1■□□□□ 0.33
RAB11FIP3-209ENST00000483002 A0A1W2PPC4 97 aa17.1■□□□□ 0.33
RAB11FIP3-209ENST00000483002 LRRC72A6NJI9 287 aa17.1■□□□□ 0.33
RAB11FIP3-209ENST00000483002 TAF4O00268 1085 aa17.1■□□□□ 0.33
RAB11FIP3-209ENST00000483002 SLC2A3P11169 496 aa17.1■□□□□ 0.33
RAB11FIP3-209ENST00000483002 PON1P27169 355 aa17.1■□□□□ 0.33
RAB11FIP3-209ENST00000483002 MZF1P28698 734 aaPredicted RBP17.1■□□□□ 0.33
RAB11FIP3-209ENST00000483002 CCR1P32246 355 aa17.1■□□□□ 0.33
RAB11FIP3-209ENST00000483002 CTSKP43235 329 aa17.1■□□□□ 0.33
RAB11FIP3-209ENST00000483002 RACK1P63244 317 aaKnown RBP17.1■□□□□ 0.33
RAB11FIP3-209ENST00000483002 IL9RQ01113 521 aa17.1■□□□□ 0.33
RAB11FIP3-209ENST00000483002 EIF4EBP2Q13542 120 aaPredicted RBP17.1■□□□□ 0.33
RAB11FIP3-209ENST00000483002 EFHC1Q5JVL4 640 aa17.1■□□□□ 0.33
RAB11FIP3-209ENST00000483002 OR6B2Q6IFH4 312 aa17.1■□□□□ 0.33
RAB11FIP3-209ENST00000483002 OR2T34Q8NGX1 318 aa17.1■□□□□ 0.33
RAB11FIP3-209ENST00000483002 SHC3Q92529 594 aa17.1■□□□□ 0.33
RAB11FIP3-209ENST00000483002 SLC6A18Q96N87 628 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms