RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 RAB6CQ53S08 254 aa17.09■□□□□ 0.33
HMGN1-214ENST00000482733 FSCBQ5H9T9 825 aa17.09■□□□□ 0.33
HMGN1-214ENST00000482733 PITRM1Q5JRX3 1037 aa17.09■□□□□ 0.33
HMGN1-214ENST00000482733 EFHC2Q5JST6 749 aa17.09■□□□□ 0.33
HMGN1-214ENST00000482733 TMEM92Q6UXU6 159 aa17.09■□□□□ 0.33
HMGN1-214ENST00000482733 CIR1Q86X95 450 aaPredicted RBP17.09■□□□□ 0.33
HMGN1-214ENST00000482733 CCDC185Q8N715 623 aa17.09■□□□□ 0.33
HMGN1-214ENST00000482733 TC2NQ8N9U0 490 aa17.09■□□□□ 0.33
HMGN1-214ENST00000482733 FAM122AQ96E09 287 aa17.09■□□□□ 0.33
HMGN1-214ENST00000482733 ACOX2Q99424 681 aa17.09■□□□□ 0.33
HMGN1-214ENST00000482733 CHP1Q99653 195 aa17.09■□□□□ 0.33
HMGN1-214ENST00000482733 ZYG11BQ9C0D3 744 aa17.09■□□□□ 0.33
HMGN1-214ENST00000482733 RAB6CQ9H0N0 254 aa17.09■□□□□ 0.33
HMGN1-214ENST00000482733 ZDHHC4Q9NPG8 344 aa17.09■□□□□ 0.33
HMGN1-214ENST00000482733 TMPRSS4Q9NRS4 437 aa17.09■□□□□ 0.33
HMGN1-214ENST00000482733 FAM86C1Q9NVL1 165 aa17.09■□□□□ 0.33
HMGN1-214ENST00000482733 POLR3BQ9NW08 1133 aaPredicted RBP17.09■□□□□ 0.33
HMGN1-214ENST00000482733 CACNA2D2Q9NY47 1150 aa17.09■□□□□ 0.33
HMGN1-214ENST00000482733 OR12D3Q9UGF7 316 aa17.09■□□□□ 0.33
HMGN1-214ENST00000482733 TBC1D30Q9Y2I9 924 aa17.09■□□□□ 0.33
HMGN1-214ENST00000482733 SNX10Q9Y5X0 201 aa17.09■□□□□ 0.33
HMGN1-214ENST00000482733 STON1Q9Y6Q2 735 aa17.09■□□□□ 0.33
HMGN1-214ENST00000482733 CACNA1HO95180 2353 aa17.09■□□□□ 0.33
HMGN1-214ENST00000482733 CACNA1IQ9P0X4 2223 aa17.08■□□□□ 0.33
HMGN1-214ENST00000482733 PROB1E7EW31 1015 aa17.08■□□□□ 0.32
HMGN1-214ENST00000482733 AXIN1O15169 862 aa17.08■□□□□ 0.32
HMGN1-214ENST00000482733 H2AFZP0C0S5 128 aa17.08■□□□□ 0.32
HMGN1-214ENST00000482733 CSKP41240 450 aa17.08■□□□□ 0.32
HMGN1-214ENST00000482733 PLK1P53350 603 aa17.08■□□□□ 0.32
HMGN1-214ENST00000482733 SULT2A1Q06520 285 aa17.08■□□□□ 0.32
HMGN1-214ENST00000482733 PIGHQ14442 188 aaPredicted RBP17.08■□□□□ 0.32
HMGN1-214ENST00000482733 ZNF234Q14588 700 aa17.08■□□□□ 0.32
HMGN1-214ENST00000482733 PLEKHG6Q3KR16 790 aa17.08■□□□□ 0.32
HMGN1-214ENST00000482733 C6orf118Q5T5N4 469 aa17.08■□□□□ 0.32
HMGN1-214ENST00000482733 HEATR6Q6AI08 1181 aaKnown RBP17.08■□□□□ 0.32
HMGN1-214ENST00000482733 CXorf57Q6NSI4 855 aaKnown RBP17.08■□□□□ 0.32
HMGN1-214ENST00000482733 SERPINA13PQ6UXR4 307 aa17.08■□□□□ 0.32
HMGN1-214ENST00000482733 H2AFVQ71UI9 128 aa17.08■□□□□ 0.32
HMGN1-214ENST00000482733 SETD3Q86TU7 594 aaPredicted RBP17.08■□□□□ 0.32
HMGN1-214ENST00000482733 RASSF3Q86WH2 238 aa17.08■□□□□ 0.32
HMGN1-214ENST00000482733 KDM1BQ8NB78 822 aa17.08■□□□□ 0.32
HMGN1-214ENST00000482733 CTNNBL1Q8WYA6 563 aaPredicted RBP17.08■□□□□ 0.32
HMGN1-214ENST00000482733 NUP85Q9BW27 656 aa17.08■□□□□ 0.32
HMGN1-214ENST00000482733 LCMT1Q9UIC8 334 aa17.08■□□□□ 0.32
HMGN1-214ENST00000482733 R4GN57 208 aa17.08■□□□□ 0.32
HMGN1-214ENST00000482733 A0A1W2PQF6 199 aa17.07■□□□□ 0.32
HMGN1-214ENST00000482733 EIF3CLB5ME19 914 aaKnown RBP17.07■□□□□ 0.32
HMGN1-214ENST00000482733 SYNCRIPO60506 623 aaKnown RBP17.07■□□□□ 0.32
HMGN1-214ENST00000482733 CNTN5O94779 1100 aa17.07■□□□□ 0.32
HMGN1-214ENST00000482733 CDC25BP30305 580 aa17.07■□□□□ 0.32
HMGN1-214ENST00000482733 L1CAMP32004 1257 aa17.07■□□□□ 0.32
HMGN1-214ENST00000482733 PCK1P35558 622 aa17.07■□□□□ 0.32
HMGN1-214ENST00000482733 PLA2G5P39877 138 aa17.07■□□□□ 0.32
HMGN1-214ENST00000482733 IL12RB1P42701 662 aa17.07■□□□□ 0.32
HMGN1-214ENST00000482733 WASP42768 502 aa17.07■□□□□ 0.32
HMGN1-214ENST00000482733 IRAK1P51617 712 aa17.07■□□□□ 0.32
HMGN1-214ENST00000482733 ST8SIA6P61647 398 aa17.07■□□□□ 0.32
HMGN1-214ENST00000482733 DMWDQ09019 674 aa17.07■□□□□ 0.32
HMGN1-214ENST00000482733 FNDC3BQ53EP0 1204 aaKnown RBP17.07■□□□□ 0.32
HMGN1-214ENST00000482733 ALFQ53S48 1182 aa17.07■□□□□ 0.32
HMGN1-214ENST00000482733 MANEALQ5VSG8 457 aa17.07■□□□□ 0.32
HMGN1-214ENST00000482733 ANO7Q6IWH7 933 aa17.07■□□□□ 0.32
HMGN1-214ENST00000482733 ZNF783Q6ZMS7 281 aa17.07■□□□□ 0.32
HMGN1-214ENST00000482733 SORCS1Q8WY21 1168 aa17.07■□□□□ 0.32
HMGN1-214ENST00000482733 TBC1D31Q96DN5 1066 aa17.07■□□□□ 0.32
HMGN1-214ENST00000482733 PANX2Q96RD6 677 aa17.07■□□□□ 0.32
HMGN1-214ENST00000482733 EIF3CQ99613 913 aaKnown RBP17.07■□□□□ 0.32
HMGN1-214ENST00000482733 UVRAGQ9P2Y5 699 aa17.07■□□□□ 0.32
HMGN1-214ENST00000482733 IP6K2Q9UHH9 426 aa17.07■□□□□ 0.32
HMGN1-214ENST00000482733 INTS6Q9UL03 887 aaKnown RBP17.07■□□□□ 0.32
HMGN1-214ENST00000482733 FZD10Q9ULW2 581 aa17.07■□□□□ 0.32
HMGN1-214ENST00000482733 TCRBV21S2A2A0A5A6 115 aa17.06■□□□□ 0.32
HMGN1-214ENST00000482733 MYO1FO00160 1098 aa17.06■□□□□ 0.32
HMGN1-214ENST00000482733 PRPSAP2O60256 369 aa17.06■□□□□ 0.32
HMGN1-214ENST00000482733 RHOCP08134 193 aa17.06■□□□□ 0.32
HMGN1-214ENST00000482733 SRPRAP08240 638 aaKnown RBP17.06■□□□□ 0.32
HMGN1-214ENST00000482733 TMEM253P0C7T8 217 aa17.06■□□□□ 0.32
HMGN1-214ENST00000482733 RHOQP17081 205 aa17.06■□□□□ 0.32
HMGN1-214ENST00000482733 HTR7P34969 479 aa17.06■□□□□ 0.32
HMGN1-214ENST00000482733 PXNP49023 591 aaPredicted RBP17.06■□□□□ 0.32
HMGN1-214ENST00000482733 ECT2LQ008S8 904 aa17.06■□□□□ 0.32
HMGN1-214ENST00000482733 ZNF252P-AS1Q0IIN9 211 aa17.06■□□□□ 0.32
HMGN1-214ENST00000482733 PTPRNQ16849 979 aa17.06■□□□□ 0.32
HMGN1-214ENST00000482733 RNF219Q5W0B1 726 aaPredicted RBP17.06■□□□□ 0.32
HMGN1-214ENST00000482733 PSTKQ8IV42 348 aaKnown RBP17.06■□□□□ 0.32
HMGN1-214ENST00000482733 CCDC170Q8IYT3 715 aa17.06■□□□□ 0.32
HMGN1-214ENST00000482733 NIPA2Q8N8Q9 360 aa17.06■□□□□ 0.32
HMGN1-214ENST00000482733 CYB5D2Q8WUJ1 264 aa17.06■□□□□ 0.32
HMGN1-214ENST00000482733 NKD2Q969F2 451 aaPredicted RBP17.06■□□□□ 0.32
HMGN1-214ENST00000482733 ARHGEF26Q96DR7 871 aa17.06■□□□□ 0.32
HMGN1-214ENST00000482733 EPAS1Q99814 870 aa17.06■□□□□ 0.32
HMGN1-214ENST00000482733 FEM1AQ9BSK4 669 aa17.06■□□□□ 0.32
HMGN1-214ENST00000482733 TRIM7Q9C029 511 aa17.06■□□□□ 0.32
HMGN1-214ENST00000482733 TMEM245Q9H330 911 aa17.06■□□□□ 0.32
HMGN1-214ENST00000482733 MPP6Q9NZW5 540 aa17.06■□□□□ 0.32
HMGN1-214ENST00000482733 BCCIPQ9P287 314 aaKnown RBP eCLIP17.06■□□□□ 0.32
HMGN1-214ENST00000482733 CTTNBP2NLQ9P2B4 639 aa17.06■□□□□ 0.32
HMGN1-214ENST00000482733 SUN2Q9UH99 717 aa17.06■□□□□ 0.32
HMGN1-214ENST00000482733 ANAPC7Q9UJX3 599 aa17.06■□□□□ 0.32
HMGN1-214ENST00000482733 WASH3PC4AMC7 463 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms