RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 UBXN1Q04323 297 aa20.53■□□□□ 0.88
MSH5-215ENST00000482280 FSCBQ5H9T9 825 aa20.53■□□□□ 0.88
MSH5-215ENST00000482280 BRMS1LQ5PSV4 323 aa20.53■□□□□ 0.88
MSH5-215ENST00000482280 ACBD5Q5T8D3 534 aaPredicted RBP20.53■□□□□ 0.88
MSH5-215ENST00000482280 NAA35Q5VZE5 725 aa20.53■□□□□ 0.88
MSH5-215ENST00000482280 LRRC31Q6UY01 552 aa20.53■□□□□ 0.88
MSH5-215ENST00000482280 MMS22LQ6ZRQ5 1243 aa20.53■□□□□ 0.88
MSH5-215ENST00000482280 EPS8L1Q8TE68 723 aa20.53■□□□□ 0.88
MSH5-215ENST00000482280 MYEOVQ96EZ4 313 aa20.53■□□□□ 0.88
MSH5-215ENST00000482280 BTBD1Q9H0C5 482 aa20.53■□□□□ 0.88
MSH5-215ENST00000482280 VANGL2Q9ULK5 521 aa20.53■□□□□ 0.88
MSH5-215ENST00000482280 EDDM13A0A1B0GTR0 161 aa20.52■□□□□ 0.88
MSH5-215ENST00000482280 A0A1B0GTW7 788 aa20.52■□□□□ 0.88
MSH5-215ENST00000482280 TM4SF5O14894 197 aa20.52■□□□□ 0.88
MSH5-215ENST00000482280 OPHN1O60890 802 aa20.52■□□□□ 0.88
MSH5-215ENST00000482280 KCNK5O95279 499 aa20.52■□□□□ 0.88
MSH5-215ENST00000482280 IGLV3-19P01714 112 aa20.52■□□□□ 0.88
MSH5-215ENST00000482280 MMEP08473 750 aa20.52■□□□□ 0.88
MSH5-215ENST00000482280 PDGFRAP16234 1089 aa20.52■□□□□ 0.88
MSH5-215ENST00000482280 MAOBP27338 520 aa20.52■□□□□ 0.88
MSH5-215ENST00000482280 GABRB2P47870 512 aa20.52■□□□□ 0.88
MSH5-215ENST00000482280 CDR2Q01850 454 aa20.52■□□□□ 0.88
MSH5-215ENST00000482280 AUHQ13825 339 aaKnown RBP20.52■□□□□ 0.88
MSH5-215ENST00000482280 HNRNPA1L2Q32P51 320 aaKnown RBP20.52■□□□□ 0.88
MSH5-215ENST00000482280 DCAF12L1Q5VU92 463 aa20.52■□□□□ 0.88
MSH5-215ENST00000482280 PSAPL1Q6NUJ1 521 aa20.52■□□□□ 0.88
MSH5-215ENST00000482280 DPY19L2P1Q6NXN4 242 aa20.52■□□□□ 0.88
MSH5-215ENST00000482280 FBXL22Q6P050 247 aa20.52■□□□□ 0.88
MSH5-215ENST00000482280 TRIM72Q6ZMU5 477 aa20.52■□□□□ 0.88
MSH5-215ENST00000482280 DHX40Q8IX18 779 aaKnown RBP20.52■□□□□ 0.88
MSH5-215ENST00000482280 CPA5Q8WXQ8 436 aa20.52■□□□□ 0.88
MSH5-215ENST00000482280 TKTL2Q9H0I9 626 aa20.52■□□□□ 0.88
MSH5-215ENST00000482280 GANQ9H2C0 597 aa20.52■□□□□ 0.88
MSH5-215ENST00000482280 SLC25A13Q9UJS0 675 aa20.52■□□□□ 0.88
MSH5-215ENST00000482280 NUP205Q92621 2012 aa20.51■□□□□ 0.87
MSH5-215ENST00000482280 FAM170AA1A519 330 aa20.51■□□□□ 0.87
MSH5-215ENST00000482280 TARSL2A2RTX5 802 aaKnown RBP20.51■□□□□ 0.87
MSH5-215ENST00000482280 LGALS16A8MUM7 142 aa20.51■□□□□ 0.87
MSH5-215ENST00000482280 METTL12A8MUP2 240 aa20.51■□□□□ 0.87
MSH5-215ENST00000482280 ARHGAP33O14559 1287 aa20.51■□□□□ 0.87
MSH5-215ENST00000482280 CDX4O14627 284 aaPredicted RBP20.51■□□□□ 0.87
MSH5-215ENST00000482280 PAGE1O75459 146 aa20.51■□□□□ 0.87
MSH5-215ENST00000482280 CLDN11O75508 207 aa20.51■□□□□ 0.87
MSH5-215ENST00000482280 ZNF18P17022 549 aa20.51■□□□□ 0.87
MSH5-215ENST00000482280 RPS14P62263 151 aaKnown RBP20.51■□□□□ 0.87
MSH5-215ENST00000482280 EIF4EBP2Q13542 120 aaPredicted RBP20.51■□□□□ 0.87
MSH5-215ENST00000482280 SLC25A52Q3SY17 297 aa20.51■□□□□ 0.87
MSH5-215ENST00000482280 SH3PXD2AQ5TCZ1 1133 aa20.51■□□□□ 0.87
MSH5-215ENST00000482280 CIR1Q86X95 450 aaPredicted RBP20.51■□□□□ 0.87
MSH5-215ENST00000482280 XYLT1Q86Y38 959 aa20.51■□□□□ 0.87
MSH5-215ENST00000482280 LMLNQ96KR4 655 aa20.51■□□□□ 0.87
MSH5-215ENST00000482280 NPY6RQ99463 290 aa20.51■□□□□ 0.87
MSH5-215ENST00000482280 PRMT1Q99873 361 aaKnown RBP20.51■□□□□ 0.87
MSH5-215ENST00000482280 ZDHHC5Q9C0B5 715 aa20.51■□□□□ 0.87
MSH5-215ENST00000482280 LIMA1Q9UHB6 759 aaKnown RBP20.51■□□□□ 0.87
MSH5-215ENST00000482280 INTS6Q9UL03 887 aaKnown RBP20.51■□□□□ 0.87
MSH5-215ENST00000482280 HS3ST4Q9Y661 456 aa20.51■□□□□ 0.87
MSH5-215ENST00000482280 SIN3BO75182 1162 aa20.5■□□□□ 0.87
MSH5-215ENST00000482280 SEMA4FO95754 770 aa20.5■□□□□ 0.87
MSH5-215ENST00000482280 CCDC172P0C7W6 258 aa20.5■□□□□ 0.87
MSH5-215ENST00000482280 KLK7P49862 253 aa20.5■□□□□ 0.87
MSH5-215ENST00000482280 NOMO3P69849 1222 aa20.5■□□□□ 0.87
MSH5-215ENST00000482280 CENPCQ03188 943 aa20.5■□□□□ 0.87
MSH5-215ENST00000482280 ACCSLQ4AC99 568 aa20.5■□□□□ 0.87
MSH5-215ENST00000482280 APCDD1Q8J025 514 aa20.5■□□□□ 0.87
MSH5-215ENST00000482280 ZCCHC9Q8N567 271 aaKnown RBP20.5■□□□□ 0.87
MSH5-215ENST00000482280 MINDY1Q8N5J2 469 aa20.5■□□□□ 0.87
MSH5-215ENST00000482280 RPL10LQ96L21 214 aaKnown RBP20.5■□□□□ 0.87
MSH5-215ENST00000482280 OMDQ99983 421 aa20.5■□□□□ 0.87
MSH5-215ENST00000482280 MUC3BQ9H195 1237 aa20.5■□□□□ 0.87
MSH5-215ENST00000482280 RSPH9Q9H1X1 276 aaPredicted RBP20.5■□□□□ 0.87
MSH5-215ENST00000482280 SGK2Q9HBY8 427 aa20.5■□□□□ 0.87
MSH5-215ENST00000482280 CAPN10Q9HC96 672 aa20.5■□□□□ 0.87
MSH5-215ENST00000482280 PIGVQ9NUD9 493 aa20.5■□□□□ 0.87
MSH5-215ENST00000482280 SEPT11Q9NVA2 429 aaKnown RBP20.5■□□□□ 0.87
MSH5-215ENST00000482280 VPS28Q9UK41 221 aa20.5■□□□□ 0.87
MSH5-215ENST00000482280 BCAT2O15382 392 aaPredicted RBP20.49■□□□□ 0.87
MSH5-215ENST00000482280 CEACAM1P13688 526 aa20.49■□□□□ 0.87
MSH5-215ENST00000482280 CSRP1P21291 193 aaKnown RBP20.49■□□□□ 0.87
MSH5-215ENST00000482280 RDXP35241 583 aaKnown RBP20.49■□□□□ 0.87
MSH5-215ENST00000482280 CTSOP43234 321 aaPredicted RBP20.49■□□□□ 0.87
MSH5-215ENST00000482280 NSFP46459 744 aaKnown RBP20.49■□□□□ 0.87
MSH5-215ENST00000482280 CXCR3P49682 368 aa20.49■□□□□ 0.87
MSH5-215ENST00000482280 CDH4P55283 916 aa20.49■□□□□ 0.87
MSH5-215ENST00000482280 TYRO3Q06418 890 aa20.49■□□□□ 0.87
MSH5-215ENST00000482280 USP30Q70CQ3 517 aa20.49■□□□□ 0.87
MSH5-215ENST00000482280 DSG4Q86SJ6 1040 aa20.49■□□□□ 0.87
MSH5-215ENST00000482280 AOPEPQ8N6M6 819 aa20.49■□□□□ 0.87
MSH5-215ENST00000482280 DNASE2BQ8WZ79 361 aa20.49■□□□□ 0.87
MSH5-215ENST00000482280 PGAP3Q96FM1 320 aaPredicted RBP20.49■□□□□ 0.87
MSH5-215ENST00000482280 TBCBQ99426 244 aa20.49■□□□□ 0.87
MSH5-215ENST00000482280 FSCN3Q9NQT6 498 aa20.49■□□□□ 0.87
MSH5-215ENST00000482280 FBXL12Q9NXK8 326 aa20.49■□□□□ 0.87
MSH5-215ENST00000482280 EIF2B4Q9UI10 523 aaKnown RBP20.49■□□□□ 0.87
MSH5-215ENST00000482280 DCHS1Q96JQ0 3298 aa20.49■□□□□ 0.87
MSH5-215ENST00000482280 CACNA1AO00555 2505 aa20.49■□□□□ 0.87
MSH5-215ENST00000482280 SMTNL1A8MU46 457 aa20.48■□□□□ 0.87
MSH5-215ENST00000482280 TTC34A8MYJ7 566 aa20.48■□□□□ 0.87
MSH5-215ENST00000482280 ACSL1P33121 698 aa20.48■□□□□ 0.87
MSH5-215ENST00000482280 KRT83P78385 493 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms