RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 HLA-BQ31612 363 aa13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 VWA3BQ502W6 1294 aa13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 RABGAP1LQ5R372 815 aa13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 TTC39BQ5VTQ0 682 aaPredicted RBP13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 MMS22LQ6ZRQ5 1243 aa13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 C11orf57Q6ZUT1 292 aaPredicted RBP13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 PASD1Q8IV76 773 aa13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 DHX40Q8IX18 779 aaKnown RBP13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 C1orf216Q8TAB5 229 aa13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 BIRC7Q96CA5 298 aa13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 MRGPRX3Q96LB0 322 aa13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 SLC2A13Q96QE2 648 aa13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 CPXM1Q96SM3 734 aa13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 OMDQ99983 421 aa13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 PDCL3Q9H2J4 239 aa13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 PABPC3Q9H361 631 aaKnown RBP13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 NDST4Q9H3R1 872 aa13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 SYNCQ9H7C4 482 aa13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 TM7SF3Q9NS93 570 aa13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 DDIT4Q9NX09 232 aa13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 KMT2BQ9UMN6 2715 aaPredicted RBP13.89□□□□□ -0.19
CTDSP1-208ENST00000482272 ASCC3Q8N3C0 2202 aaKnown RBP13.88□□□□□ -0.19
CTDSP1-208ENST00000482272 SYNJ2BP-COX16A0A087WUM0 186 aa13.88□□□□□ -0.19
CTDSP1-208ENST00000482272 EDDM13A0A1B0GTR0 161 aa13.88□□□□□ -0.19
CTDSP1-208ENST00000482272 A0A1B0GVT2 93 aa13.88□□□□□ -0.19
CTDSP1-208ENST00000482272 FOXN3O00409 490 aaPredicted RBP13.88□□□□□ -0.19
CTDSP1-208ENST00000482272 HYAL3O43820 417 aaPredicted RBP13.88□□□□□ -0.19
CTDSP1-208ENST00000482272 GRAP2O75791 330 aa13.88□□□□□ -0.19
CTDSP1-208ENST00000482272 CD27P26842 260 aa13.88□□□□□ -0.19
CTDSP1-208ENST00000482272 ERCC5P28715 1186 aaPredicted RBP13.88□□□□□ -0.19
CTDSP1-208ENST00000482272 NOS2P35228 1153 aa13.88□□□□□ -0.19
CTDSP1-208ENST00000482272 CLCN1P35523 988 aa13.88□□□□□ -0.19
CTDSP1-208ENST00000482272 NUMBP49757 651 aa13.88□□□□□ -0.19
CTDSP1-208ENST00000482272 FAM193AP78312 1265 aa13.88□□□□□ -0.19
CTDSP1-208ENST00000482272 SLC6A3Q01959 620 aa13.88□□□□□ -0.19
CTDSP1-208ENST00000482272 KCNMA1Q12791 1236 aa13.88□□□□□ -0.19
CTDSP1-208ENST00000482272 C9orf64Q5T6V5 341 aa13.88□□□□□ -0.19
CTDSP1-208ENST00000482272 LRSAM1Q6UWE0 723 aa13.88□□□□□ -0.19
CTDSP1-208ENST00000482272 ZDHHC17Q8IUH5 632 aa13.88□□□□□ -0.19
CTDSP1-208ENST00000482272 NAXDQ8IW45 347 aa13.88□□□□□ -0.19
CTDSP1-208ENST00000482272 APCDD1Q8J025 514 aa13.88□□□□□ -0.19
CTDSP1-208ENST00000482272 CCAR2Q8N163 923 aaKnown RBP13.88□□□□□ -0.19
CTDSP1-208ENST00000482272 SETD7Q8WTS6 366 aaKnown RBP13.88□□□□□ -0.19
CTDSP1-208ENST00000482272 CAMK1GQ96NX5 476 aa13.88□□□□□ -0.19
CTDSP1-208ENST00000482272 TUBGCP2Q9BSJ2 902 aa13.88□□□□□ -0.19
CTDSP1-208ENST00000482272 PLCB1Q9NQ66 1216 aa13.88□□□□□ -0.19
CTDSP1-208ENST00000482272 FBXL12Q9NXK8 326 aa13.88□□□□□ -0.19
CTDSP1-208ENST00000482272 COX16Q9P0S2 106 aa13.88□□□□□ -0.19
CTDSP1-208ENST00000482272 SLCO3A1Q9UIG8 710 aa13.88□□□□□ -0.19
CTDSP1-208ENST00000482272 NEUROG3Q9Y4Z2 214 aa13.88□□□□□ -0.19
CTDSP1-208ENST00000482272 PLXNA2O75051 1894 aa13.87□□□□□ -0.19
CTDSP1-208ENST00000482272 NUMA1Q14980 2115 aa13.87□□□□□ -0.19
CTDSP1-208ENST00000482272 TMEM8BA6NDV4 472 aa13.87□□□□□ -0.19
CTDSP1-208ENST00000482272 LRRC72A6NJI9 287 aa13.87□□□□□ -0.19
CTDSP1-208ENST00000482272 TTC34A8MYJ7 566 aa13.87□□□□□ -0.19
CTDSP1-208ENST00000482272 SLC8A1P32418 973 aa13.87□□□□□ -0.19
CTDSP1-208ENST00000482272 CTSOP43234 321 aaPredicted RBP13.87□□□□□ -0.19
CTDSP1-208ENST00000482272 GRIA4P48058 902 aa13.87□□□□□ -0.19
CTDSP1-208ENST00000482272 IRAK1P51617 712 aa13.87□□□□□ -0.19
CTDSP1-208ENST00000482272 PLK1P53350 603 aa13.87□□□□□ -0.19
CTDSP1-208ENST00000482272 CST6Q15828 149 aa13.87□□□□□ -0.19
CTDSP1-208ENST00000482272 OTUD1Q5VV17 481 aaPredicted RBP13.87□□□□□ -0.19
CTDSP1-208ENST00000482272 KIAA0895LQ68EN5 471 aa13.87□□□□□ -0.19
CTDSP1-208ENST00000482272 FAM183BPQ6ZVS7 135 aa13.87□□□□□ -0.19
CTDSP1-208ENST00000482272 ADAT2Q7Z6V5 191 aaKnown RBP13.87□□□□□ -0.19
CTDSP1-208ENST00000482272 SLC47A2Q86VL8 602 aa13.87□□□□□ -0.19
CTDSP1-208ENST00000482272 MMAAQ8IVH4 418 aaKnown RBP13.87□□□□□ -0.19
CTDSP1-208ENST00000482272 KDF1Q8NAX2 398 aaPredicted RBP13.87□□□□□ -0.19
CTDSP1-208ENST00000482272 C1orf131Q8NDD1 294 aaKnown RBP13.87□□□□□ -0.19
CTDSP1-208ENST00000482272 SKA1Q96BD8 255 aa13.87□□□□□ -0.19
CTDSP1-208ENST00000482272 RPL10LQ96L21 214 aaKnown RBP13.87□□□□□ -0.19
CTDSP1-208ENST00000482272 RPRD1AQ96P16 312 aaPredicted RBP13.87□□□□□ -0.19
CTDSP1-208ENST00000482272 PRMT1Q99873 361 aaKnown RBP13.87□□□□□ -0.19
CTDSP1-208ENST00000482272 IL21RQ9HBE5 538 aa13.87□□□□□ -0.19
CTDSP1-208ENST00000482272 TM9SF3Q9HD45 589 aa13.87□□□□□ -0.19
CTDSP1-208ENST00000482272 RRN3Q9NYV6 651 aa13.87□□□□□ -0.19
CTDSP1-208ENST00000482272 MSRB2Q9Y3D2 182 aa13.87□□□□□ -0.19
CTDSP1-208ENST00000482272 PCDHGB2Q9Y5G2 931 aa13.87□□□□□ -0.19
CTDSP1-208ENST00000482272 FRYQ5TBA9 3013 aa13.87□□□□□ -0.19
CTDSP1-208ENST00000482272 ITIH6Q6UXX5 1313 aa13.87□□□□□ -0.19
CTDSP1-208ENST00000482272 TMEM131Q92545 1883 aa13.87□□□□□ -0.19
CTDSP1-208ENST00000482272 CNOT1A5YKK6 2376 aaKnown RBP13.86□□□□□ -0.19
CTDSP1-208ENST00000482272 TP53BP1Q12888 1972 aaPredicted RBP13.86□□□□□ -0.19
CTDSP1-208ENST00000482272 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.86□□□□□ -0.19
CTDSP1-208ENST00000482272 A0A1B0GVM2 712 aa13.86□□□□□ -0.19
CTDSP1-208ENST00000482272 A0A1W2PP55 124 aa13.86□□□□□ -0.19
CTDSP1-208ENST00000482272 TCAF2A6NFQ2 919 aa13.86□□□□□ -0.19
CTDSP1-208ENST00000482272 FAM47DPA6NHR8 397 aa13.86□□□□□ -0.19
CTDSP1-208ENST00000482272 M0QYT0 321 aa13.86□□□□□ -0.19
CTDSP1-208ENST00000482272 PES1O00541 588 aaKnown RBP13.86□□□□□ -0.19
CTDSP1-208ENST00000482272 MID1O15344 667 aa13.86□□□□□ -0.19
CTDSP1-208ENST00000482272 RNASEH2AO75792 299 aaKnown RBP13.86□□□□□ -0.19
CTDSP1-208ENST00000482272 ERBB2P04626 1255 aa13.86□□□□□ -0.19
CTDSP1-208ENST00000482272 PDGFRAP16234 1089 aa13.86□□□□□ -0.19
CTDSP1-208ENST00000482272 BNC1Q01954 994 aa13.86□□□□□ -0.19
CTDSP1-208ENST00000482272 NME3Q13232 169 aa13.86□□□□□ -0.19
CTDSP1-208ENST00000482272 ZNF177Q13360 481 aaPredicted RBP13.86□□□□□ -0.19
CTDSP1-208ENST00000482272 AUHQ13825 339 aaKnown RBP13.86□□□□□ -0.19
CTDSP1-208ENST00000482272 KIF19Q2TAC6 998 aa13.86□□□□□ -0.19
CTDSP1-208ENST00000482272 PTPN20Q4JDL3 420 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms