RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 TMEM245Q9H330 911 aa9.81□□□□□ -0.84
SMARCE1-210ENST00000481231 EBF2Q9HAK2 575 aa9.81□□□□□ -0.84
SMARCE1-210ENST00000481231 RAB20Q9NX57 234 aa9.81□□□□□ -0.84
SMARCE1-210ENST00000481231 SRPK3Q9UPE1 567 aa9.81□□□□□ -0.84
SMARCE1-210ENST00000481231 SSUH2Q9Y2M2 353 aa9.81□□□□□ -0.84
SMARCE1-210ENST00000481231 HBS1LQ9Y450 684 aaKnown RBP9.81□□□□□ -0.84
SMARCE1-210ENST00000481231 AHCTF1Q8WYP5 2266 aa9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 YJEFN3A6XGL0 299 aa9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 E7ENQ6 273 aa9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 XPO1O14980 1071 aaKnown RBP9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 MSI1O43347 362 aaKnown RBP9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 SDC3O75056 442 aa9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 C7P10643 843 aa9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 ITGB6P18564 788 aa9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 ACP1P24666 158 aa9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 LSSP48449 732 aa9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 HARS2P49590 506 aaKnown RBP9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 SGSHP51688 502 aa9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 RPS14P62263 151 aaKnown RBP9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 EDRF1Q3B7T1 1238 aa9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 ZSCAN23Q3MJ62 389 aa9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 CBWD6Q4V339 395 aa9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 MPPE1Q53F39 396 aa9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 CBWD3Q5JTY5 395 aa9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 CBWD5Q5RIA9 395 aa9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 ADGRF1Q5T601 910 aa9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 BSPRYQ5W0U4 402 aa9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 KIAA0895LQ68EN5 471 aa9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 KRBA2Q6ZNG9 492 aa9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 CHST9Q7L1S5 443 aa9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 ADIPOR2Q86V24 386 aa9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 ZC3H3Q8IXZ2 948 aaKnown RBP9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 WFIKKN2Q8TEU8 576 aa9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 RNF139Q8WU17 664 aa9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 IPO9Q96P70 1041 aaKnown RBP9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 GOLPH3LQ9H4A5 285 aa9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 POLR1BQ9H9Y6 1135 aa9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 LRRC4Q9HBW1 653 aa9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 GDF3Q9NR23 364 aa9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 AASDHPPTQ9NRN7 309 aa9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 THSD1Q9NS62 852 aa9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 OLA1Q9NTK5 396 aaKnown RBP9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 ABCB8Q9NUT2 735 aa9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 WDR70Q9NW82 654 aa9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 SFMBT1Q9UHJ3 866 aa9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 GGA2Q9UJY4 613 aa9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 STOML2Q9UJZ1 356 aa9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 TSPAN16Q9UKR8 245 aa9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 MAN2B2Q9Y2E5 1009 aa9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 USP9YO00507 2555 aaPredicted RBP9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 CKAP5Q14008 2032 aa9.8□□□□□ -0.84
SMARCE1-210ENST00000481231 PLXNA2O75051 1894 aa9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 A0A1W2PNU3 283 aaPredicted RBP9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 A0A1W2PPC4 97 aa9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 PMS2P1A4D2B8 440 aa9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 ENO4A6NNW6 628 aa9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 O00370 1275 aa9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 CETN3O15182 167 aa9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 STX10O60499 249 aa9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 CSO75390 466 aaKnown RBP9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 LATS1O95835 1130 aa9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 DLDP09622 509 aaKnown RBP9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 FAM87AP0C7U9 286 aa9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 EPB41P11171 864 aaKnown RBP9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 PABPC1P11940 636 aaKnown RBP9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 CD19P15391 556 aa9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 ARRB1P49407 418 aaPredicted RBP9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 ZNF445P59923 1031 aa9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 KRT85P78386 507 aa9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 BST2Q10589 180 aaKnown RBP9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 CUL2Q13617 745 aa9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 PROX2Q3B8N5 592 aa9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 SGO2Q562F6 1265 aa9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 C3orf38Q5JPI3 329 aa9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 MBLAC2Q68D91 279 aa9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 KANSL1Q7Z3B3 1105 aa9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 KIAA0907Q7Z7F0 614 aaPredicted RBP9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 LSMEM2Q8N112 164 aa9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 SIX6OS1Q8N1H7 587 aa9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 UBA3Q8TBC4 463 aa9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 WFDC5Q8TCV5 224 aa9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 EXTL1Q92935 676 aa9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 TMA16Q96EY4 203 aaKnown RBP9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 FBRSQ9HAH7 460 aa9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 PRSS16Q9NQE7 514 aa9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 HESX1Q9UBX0 185 aa9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 PLA2G4CQ9UP65 541 aa9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 ZDHHC9Q9Y397 364 aa9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 TP53BP1Q12888 1972 aaPredicted RBP9.79□□□□□ -0.84
SMARCE1-210ENST00000481231 TLN1Q9Y490 2541 aaKnown RBP9.78□□□□□ -0.84
SMARCE1-210ENST00000481231 A0A1W2PQ27 194 aa9.78□□□□□ -0.84
SMARCE1-210ENST00000481231 A0A1W2PQ64 194 aa9.78□□□□□ -0.84
SMARCE1-210ENST00000481231 TRIM38O00635 465 aa9.78□□□□□ -0.84
SMARCE1-210ENST00000481231 YKT6O15498 198 aa9.78□□□□□ -0.84
SMARCE1-210ENST00000481231 SIGLEC6O43699 453 aa9.78□□□□□ -0.84
SMARCE1-210ENST00000481231 GABBR2O75899 941 aa9.78□□□□□ -0.84
SMARCE1-210ENST00000481231 DNTTP04053 509 aa9.78□□□□□ -0.84
SMARCE1-210ENST00000481231 SETSIPP0DME0 302 aa9.78□□□□□ -0.84
SMARCE1-210ENST00000481231 CD38P28907 300 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms