RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 KDM1BQ8NB78 822 aa13.87□□□□□ -0.19
NDC1-202ENST00000480952 SLC4A11Q8NBS3 891 aa13.87□□□□□ -0.19
NDC1-202ENST00000480952 TTC9Q92623 222 aa13.87□□□□□ -0.19
NDC1-202ENST00000480952 MED8Q96G25 268 aa13.87□□□□□ -0.19
NDC1-202ENST00000480952 LMLNQ96KR4 655 aa13.87□□□□□ -0.19
NDC1-202ENST00000480952 MRGPRX3Q96LB0 322 aa13.87□□□□□ -0.19
NDC1-202ENST00000480952 DEPDC7Q96QD5 511 aa13.87□□□□□ -0.19
NDC1-202ENST00000480952 FAM129BQ96TA1 746 aa13.87□□□□□ -0.19
NDC1-202ENST00000480952 DPH1Q9BZG8 443 aa13.87□□□□□ -0.19
NDC1-202ENST00000480952 IRX2Q9BZI1 471 aaPredicted RBP13.87□□□□□ -0.19
NDC1-202ENST00000480952 ZSCAN16Q9H4T2 348 aaPredicted RBP13.87□□□□□ -0.19
NDC1-202ENST00000480952 ABCC13Q9NSE7 274 aa13.87□□□□□ -0.19
NDC1-202ENST00000480952 ERVW-1Q9UQF0 538 aa13.87□□□□□ -0.19
NDC1-202ENST00000480952 TYW5A2RUC4 315 aaKnown RBP13.86□□□□□ -0.19
NDC1-202ENST00000480952 YJEFN3A6XGL0 299 aa13.86□□□□□ -0.19
NDC1-202ENST00000480952 C10orf142B7Z368 130 aa13.86□□□□□ -0.19
NDC1-202ENST00000480952 E7ENQ6 273 aa13.86□□□□□ -0.19
NDC1-202ENST00000480952 TULP2O00295 520 aa13.86□□□□□ -0.19
NDC1-202ENST00000480952 LATO43561 262 aa13.86□□□□□ -0.19
NDC1-202ENST00000480952 CUTAO60888 179 aa13.86□□□□□ -0.19
NDC1-202ENST00000480952 DXOO77932 396 aaKnown RBP13.86□□□□□ -0.19
NDC1-202ENST00000480952 IL1BP01584 269 aa13.86□□□□□ -0.19
NDC1-202ENST00000480952 SRPRAP08240 638 aaKnown RBP13.86□□□□□ -0.19
NDC1-202ENST00000480952 TRIM49P0CI25 452 aa13.86□□□□□ -0.19
NDC1-202ENST00000480952 TRIM49CP0CI26 452 aa13.86□□□□□ -0.19
NDC1-202ENST00000480952 PDIA4P13667 645 aaKnown RBP13.86□□□□□ -0.19
NDC1-202ENST00000480952 MAT2AP31153 395 aaKnown RBP13.86□□□□□ -0.19
NDC1-202ENST00000480952 SLC6A4P31645 630 aa13.86□□□□□ -0.19
NDC1-202ENST00000480952 LSSP48449 732 aa13.86□□□□□ -0.19
NDC1-202ENST00000480952 RAD23BP54727 409 aa13.86□□□□□ -0.19
NDC1-202ENST00000480952 PPP3CAQ08209 521 aa13.86□□□□□ -0.19
NDC1-202ENST00000480952 OVGP1Q12889 678 aa13.86□□□□□ -0.19
NDC1-202ENST00000480952 CUL4AQ13619 759 aa13.86□□□□□ -0.19
NDC1-202ENST00000480952 RNF219Q5W0B1 726 aaPredicted RBP13.86□□□□□ -0.19
NDC1-202ENST00000480952 SIX6OS1Q8N1H7 587 aa13.86□□□□□ -0.19
NDC1-202ENST00000480952 STK40Q8N2I9 435 aa13.86□□□□□ -0.19
NDC1-202ENST00000480952 SLC25A45Q8N413 288 aa13.86□□□□□ -0.19
NDC1-202ENST00000480952 HJURPQ8NCD3 748 aaPredicted RBP13.86□□□□□ -0.19
NDC1-202ENST00000480952 ABCG4Q9H172 646 aa13.86□□□□□ -0.19
NDC1-202ENST00000480952 KCTD10Q9H3F6 313 aa13.86□□□□□ -0.19
NDC1-202ENST00000480952 POLR1BQ9H9Y6 1135 aa13.86□□□□□ -0.19
NDC1-202ENST00000480952 THSD1Q9NS62 852 aa13.86□□□□□ -0.19
NDC1-202ENST00000480952 CISHQ9NSE2 258 aa13.86□□□□□ -0.19
NDC1-202ENST00000480952 SLCO3A1Q9UIG8 710 aa13.86□□□□□ -0.19
NDC1-202ENST00000480952 INTS6Q9UL03 887 aaKnown RBP13.86□□□□□ -0.19
NDC1-202ENST00000480952 PLXNA2O75051 1894 aa13.86□□□□□ -0.19
NDC1-202ENST00000480952 XPO1O14980 1071 aaKnown RBP13.85□□□□□ -0.19
NDC1-202ENST00000480952 CALUO43852 315 aaPredicted RBP13.85□□□□□ -0.19
NDC1-202ENST00000480952 OPA1O60313 960 aa13.85□□□□□ -0.19
NDC1-202ENST00000480952 ACSL4O60488 711 aa13.85□□□□□ -0.19
NDC1-202ENST00000480952 CSO75390 466 aaKnown RBP13.85□□□□□ -0.19
NDC1-202ENST00000480952 MOCS3O95396 460 aa13.85□□□□□ -0.19
NDC1-202ENST00000480952 KRT13P13646 458 aa13.85□□□□□ -0.19
NDC1-202ENST00000480952 NUDT1P36639 197 aa13.85□□□□□ -0.19
NDC1-202ENST00000480952 CTSOP43234 321 aaPredicted RBP13.85□□□□□ -0.19
NDC1-202ENST00000480952 ECT2LQ008S8 904 aa13.85□□□□□ -0.19
NDC1-202ENST00000480952 ADIGQ0VDE8 80 aa13.85□□□□□ -0.19
NDC1-202ENST00000480952 CDH18Q13634 790 aa13.85□□□□□ -0.19
NDC1-202ENST00000480952 GOLGA7BQ2TAP0 167 aa13.85□□□□□ -0.19
NDC1-202ENST00000480952 FAM133BQ5BKY9 247 aaKnown RBP13.85□□□□□ -0.19
NDC1-202ENST00000480952 PITRM1Q5JRX3 1037 aa13.85□□□□□ -0.19
NDC1-202ENST00000480952 CDCP2Q5VXM1 449 aa13.85□□□□□ -0.19
NDC1-202ENST00000480952 NUGGCQ68CJ6 796 aa13.85□□□□□ -0.19
NDC1-202ENST00000480952 MMS22LQ6ZRQ5 1243 aa13.85□□□□□ -0.19
NDC1-202ENST00000480952 INTS8Q75QN2 995 aaKnown RBP13.85□□□□□ -0.19
NDC1-202ENST00000480952 PRICKLE2Q7Z3G6 844 aa13.85□□□□□ -0.19
NDC1-202ENST00000480952 TMC6Q7Z403 805 aa13.85□□□□□ -0.19
NDC1-202ENST00000480952 KIAA0895Q8NCT3 520 aa13.85□□□□□ -0.19
NDC1-202ENST00000480952 TATDN2Q93075 761 aa13.85□□□□□ -0.19
NDC1-202ENST00000480952 KLHDC7BQ96G42 594 aa13.85□□□□□ -0.19
NDC1-202ENST00000480952 DDX50Q9BQ39 737 aaKnown RBP13.85□□□□□ -0.19
NDC1-202ENST00000480952 OSBPL2Q9H1P3 480 aa13.85□□□□□ -0.19
NDC1-202ENST00000480952 UPF2Q9HAU5 1272 aaKnown RBP13.85□□□□□ -0.19
NDC1-202ENST00000480952 EXOC1Q9NV70 894 aa13.85□□□□□ -0.19
NDC1-202ENST00000480952 ARHGAP20Q9P2F6 1191 aa13.85□□□□□ -0.19
NDC1-202ENST00000480952 HESX1Q9UBX0 185 aa13.85□□□□□ -0.19
NDC1-202ENST00000480952 MTMR6Q9Y217 621 aa13.85□□□□□ -0.19
NDC1-202ENST00000480952 DMTF1Q9Y222 760 aa13.85□□□□□ -0.19
NDC1-202ENST00000480952 MYLKQ15746 1914 aa13.85□□□□□ -0.19
NDC1-202ENST00000480952 COL6A6A6NMZ7 2263 aa13.85□□□□□ -0.19
NDC1-202ENST00000480952 MAPK13O15264 365 aa13.84□□□□□ -0.19
NDC1-202ENST00000480952 FFAR2O15552 330 aa13.84□□□□□ -0.19
NDC1-202ENST00000480952 CKMT1AP12532 417 aa13.84□□□□□ -0.19
NDC1-202ENST00000480952 KRT10P13645 584 aa13.84□□□□□ -0.19
NDC1-202ENST00000480952 DGKAP23743 735 aa13.84□□□□□ -0.19
NDC1-202ENST00000480952 MZF1P28698 734 aaPredicted RBP13.84□□□□□ -0.19
NDC1-202ENST00000480952 CSRP3P50461 194 aa13.84□□□□□ -0.19
NDC1-202ENST00000480952 RPS24P62847 133 aaKnown RBP13.84□□□□□ -0.19
NDC1-202ENST00000480952 FSCBQ5H9T9 825 aa13.84□□□□□ -0.19
NDC1-202ENST00000480952 GRAMD1CQ8IYS0 662 aa13.84□□□□□ -0.19
NDC1-202ENST00000480952 CEP57L1Q8IYX8 460 aa13.84□□□□□ -0.19
NDC1-202ENST00000480952 OR4C6Q8NH72 309 aa13.84□□□□□ -0.19
NDC1-202ENST00000480952 SNRNP27Q8WVK2 155 aaKnown RBP13.84□□□□□ -0.19
NDC1-202ENST00000480952 VCPIP1Q96JH7 1222 aa13.84□□□□□ -0.19
NDC1-202ENST00000480952 RPL10LQ96L21 214 aaKnown RBP13.84□□□□□ -0.19
NDC1-202ENST00000480952 ZNF396Q96N95 335 aaPredicted RBP13.84□□□□□ -0.19
NDC1-202ENST00000480952 KDM4CQ9H3R0 1056 aa13.84□□□□□ -0.19
NDC1-202ENST00000480952 TMEM8AQ9HCN3 771 aa13.84□□□□□ -0.19
NDC1-202ENST00000480952 FAM13BQ9NYF5 915 aa13.84□□□□□ -0.19
NDC1-202ENST00000480952 CYTH4Q9UIA0 394 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms