RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 ENDOD1O94919 500 aa10.89□□□□□ -0.67
SIK3-210ENST00000480468 VAPBO95292 243 aa10.89□□□□□ -0.67
SIK3-210ENST00000480468 HSPA4LO95757 839 aa10.89□□□□□ -0.67
SIK3-210ENST00000480468 ALOX5P09917 674 aa10.89□□□□□ -0.67
SIK3-210ENST00000480468 BMP2P12643 396 aa10.89□□□□□ -0.67
SIK3-210ENST00000480468 TPSB2P20231 275 aa10.89□□□□□ -0.67
SIK3-210ENST00000480468 CD247P20963 164 aa10.89□□□□□ -0.67
SIK3-210ENST00000480468 YWHABP31946 246 aaKnown RBP10.89□□□□□ -0.67
SIK3-210ENST00000480468 SSTR3P32745 418 aaPredicted RBP10.89□□□□□ -0.67
SIK3-210ENST00000480468 GSSP48637 474 aa10.89□□□□□ -0.67
SIK3-210ENST00000480468 HNRNPFP52597 415 aaKnown RBP10.89□□□□□ -0.67
SIK3-210ENST00000480468 NRLP54845 237 aa10.89□□□□□ -0.67
SIK3-210ENST00000480468 TMBIM6P55061 237 aa10.89□□□□□ -0.67
SIK3-210ENST00000480468 NME5P56597 212 aa10.89□□□□□ -0.67
SIK3-210ENST00000480468 NFATC3Q12968 1075 aa10.89□□□□□ -0.67
SIK3-210ENST00000480468 BNIP3Q12983 259 aa10.89□□□□□ -0.67
SIK3-210ENST00000480468 IKQ13123 557 aaPredicted RBP10.89□□□□□ -0.67
SIK3-210ENST00000480468 RAB39AQ14964 217 aa10.89□□□□□ -0.67
SIK3-210ENST00000480468 TPSAB1Q15661 275 aa10.89□□□□□ -0.67
SIK3-210ENST00000480468 LSM12Q3MHD2 195 aaKnown RBP10.89□□□□□ -0.67
SIK3-210ENST00000480468 KCNT1Q5JUK3 1230 aa10.89□□□□□ -0.67
SIK3-210ENST00000480468 PPM1LQ5SGD2 360 aa10.89□□□□□ -0.67
SIK3-210ENST00000480468 TTC33Q6PID6 262 aaPredicted RBP10.89□□□□□ -0.67
SIK3-210ENST00000480468 GADL1Q6ZQY3 521 aa10.89□□□□□ -0.67
SIK3-210ENST00000480468 SIX6OS1Q8N1H7 587 aa10.89□□□□□ -0.67
SIK3-210ENST00000480468 ZNF781Q8N8C0 355 aa10.89□□□□□ -0.67
SIK3-210ENST00000480468 MAPK15Q8TD08 544 aa10.89□□□□□ -0.67
SIK3-210ENST00000480468 PTCD2Q8WV60 388 aaKnown RBP10.89□□□□□ -0.67
SIK3-210ENST00000480468 LRTOMTQ8WZ04 291 aa10.89□□□□□ -0.67
SIK3-210ENST00000480468 OTUD5Q96G74 571 aa10.89□□□□□ -0.67
SIK3-210ENST00000480468 GPR101Q96P66 508 aaPredicted RBP10.89□□□□□ -0.67
SIK3-210ENST00000480468 MXRA8Q9BRK3 442 aa10.89□□□□□ -0.67
SIK3-210ENST00000480468 FAM213AQ9BRX8 229 aa10.89□□□□□ -0.67
SIK3-210ENST00000480468 TRPV6Q9H1D0 765 aa10.89□□□□□ -0.67
SIK3-210ENST00000480468 ARID2Q68CP9 1835 aa10.89□□□□□ -0.67
SIK3-210ENST00000480468 QSER1Q2KHR3 1735 aa10.89□□□□□ -0.67
SIK3-210ENST00000480468 TMX2-CTNND1H3BSU7 103 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 CFLARO15519 480 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 PAPSS1O43252 624 aaPredicted RBP10.88□□□□□ -0.67
SIK3-210ENST00000480468 CFBP00751 764 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 C7P10643 843 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 ENO3P13929 434 aaPredicted RBP10.88□□□□□ -0.67
SIK3-210ENST00000480468 TAL1P17542 331 aaPredicted RBP10.88□□□□□ -0.67
SIK3-210ENST00000480468 MSX2P35548 267 aaPredicted RBP10.88□□□□□ -0.67
SIK3-210ENST00000480468 NIPAL4Q0D2K0 466 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 PMS2P3Q13401 168 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 MTX3Q5HYI7 312 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 FAM102BQ5T8I3 360 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 MFSD4BQ5TF39 518 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 GPR107Q5VW38 600 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 SCARA3Q6AZY7 606 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 FAM117BQ6P1L5 589 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 ZBTB49Q6ZSB9 765 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 NIPA1Q7RTP0 329 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 C4orf19Q8IY42 314 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 SREK1Q8WXA9 508 aaKnown RBP10.88□□□□□ -0.67
SIK3-210ENST00000480468 USP13Q92995 863 aaPredicted RBP10.88□□□□□ -0.67
SIK3-210ENST00000480468 ACO2Q99798 780 aaKnown RBP10.88□□□□□ -0.67
SIK3-210ENST00000480468 YTHDF1Q9BYJ9 559 aaKnown RBP10.88□□□□□ -0.67
SIK3-210ENST00000480468 PARVBQ9HBI1 364 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 XPNPEP3Q9NQH7 507 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 KMT5AQ9NQR1 393 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 PCDHGC3Q9UN70 934 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 ERVK-11Q9UQG0 969 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 CPQQ9Y646 472 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 STRCP1A6NGW2 1772 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 PSME4Q14997 1843 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 WDR64B1ANS9 1081 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 H7C0C1 242 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 HDAC3O15379 428 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 DHX15O43143 795 aaKnown RBP10.88□□□□□ -0.67
SIK3-210ENST00000480468 KDM1AO60341 852 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 CLPXO76031 633 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 KRT3P12035 628 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 TNNI1P19237 187 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 POLR2BP30876 1174 aaKnown RBP10.88□□□□□ -0.67
SIK3-210ENST00000480468 RFC1P35251 1148 aaPredicted RBP10.88□□□□□ -0.67
SIK3-210ENST00000480468 ATP5OP48047 213 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 KCNQ4P56696 695 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 CAMK2BQ13554 666 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 PTK2BQ14289 1009 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 ARL13BQ3SXY8 428 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 INTS11Q5TA45 600 aaKnown RBP10.88□□□□□ -0.67
SIK3-210ENST00000480468 AGAP7PQ5VUJ5 663 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 ZNF534Q76KX8 674 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 CPNE9Q8IYJ1 553 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 ZNF786Q8N393 782 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 TDRD5Q8NAT2 981 aaKnown RBP10.88□□□□□ -0.67
SIK3-210ENST00000480468 SLC4A11Q8NBS3 891 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 PNPT1Q8TCS8 783 aaKnown RBP10.88□□□□□ -0.67
SIK3-210ENST00000480468 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.88□□□□□ -0.67
SIK3-210ENST00000480468 ISL2Q96A47 359 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 VPS33BQ9H267 617 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 SEMA6AQ9H2E6 1030 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 RNPEPQ9H4A4 650 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 ZBTB26Q9HCK0 441 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 VTA1Q9NP79 307 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 CD320Q9NPF0 282 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 C8orf4Q9NR00 106 aa10.88□□□□□ -0.67
SIK3-210ENST00000480468 ANKEF1Q9NU02 776 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms