RNA–Protein interactions for RNA: ENST00000480420.5

CTPS1-209, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 750 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-209ENST00000480420 PCNX2A6NKB5 2137 aa8.35□□□□□ -1.07
CTPS1-209ENST00000480420 ANKRD11Q6UB99 2663 aaPredicted RBP8.35□□□□□ -1.07
CTPS1-209ENST00000480420 PLXNA2O75051 1894 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 PCDH15Q96QU1 1955 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.34□□□□□ -1.07
CTPS1-209ENST00000480420 A0A1W2PP55 124 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 KCNU1A8MYU2 1149 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 C1QTNF9BB2RNN3 333 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 PLK4O00444 970 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 MID1O15344 667 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 HSF2BPO75031 334 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 IL1BP01584 269 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 ASLP04424 464 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 ERBB2P04626 1255 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 TPM2P07951 284 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 C1QTNF9P0C862 333 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 SLC2A3P11169 496 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 CCR1P32246 355 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 MATKP42679 507 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 STK19P49842 368 aaPredicted RBP8.34□□□□□ -1.07
CTPS1-209ENST00000480420 SULT1E1P49888 294 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 C21orf59P57076 290 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 FAM193AP78312 1265 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 ECT2LQ008S8 904 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 IL9RQ01113 521 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 ZNF177Q13360 481 aaPredicted RBP8.34□□□□□ -1.07
CTPS1-209ENST00000480420 DRAP1Q14919 205 aaPredicted RBP8.34□□□□□ -1.07
CTPS1-209ENST00000480420 TEAD4Q15561 434 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 TRIP6Q15654 476 aaKnown RBP8.34□□□□□ -1.07
CTPS1-209ENST00000480420 HLA-BQ31612 363 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 C2CD6Q53TS8 623 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 RABGAP1LQ5R372 815 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 FOXR2Q6PJQ5 311 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 TMEM110Q86TL2 294 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 METTL3Q86U44 580 aaKnown RBP8.34□□□□□ -1.07
CTPS1-209ENST00000480420 IRF2BP1Q8IU81 584 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 CCAR2Q8N163 923 aaKnown RBP8.34□□□□□ -1.07
CTPS1-209ENST00000480420 STK40Q8N2I9 435 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 PNPLA1Q8N8W4 532 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 CADM4Q8NFZ8 388 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 OR14C36Q8NHC7 312 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 STK32AQ8WU08 396 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 SHC3Q92529 594 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 SCNM1Q9BWG6 230 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 MUC3BQ9H195 1237 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 TMEM245Q9H330 911 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 IL21RQ9HBE5 538 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 AASDHPPTQ9NRN7 309 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 SAMSN1Q9NSI8 373 aaKnown RBP8.34□□□□□ -1.07
CTPS1-209ENST00000480420 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.34□□□□□ -1.07
CTPS1-209ENST00000480420 SLCO3A1Q9UIG8 710 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 SLC25A13Q9UJS0 675 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 STOML2Q9UJZ1 356 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 CNTN6Q9UQ52 1028 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 SPEGQ15772 3267 aa8.34□□□□□ -1.07
CTPS1-209ENST00000480420 MUC22E2RYF6 1773 aaPredicted RBP8.33□□□□□ -1.08
CTPS1-209ENST00000480420 DOCK9Q9BZ29 2069 aa8.33□□□□□ -1.08
CTPS1-209ENST00000480420 TBC1D3DA0A087WVF3 549 aa8.33□□□□□ -1.08
CTPS1-209ENST00000480420 TBC1D3IA0A087WXS9 549 aa8.33□□□□□ -1.08
CTPS1-209ENST00000480420 TBC1D3EA0A087X179 549 aa8.33□□□□□ -1.08
CTPS1-209ENST00000480420 TBC1D3KA0A087X1G2 549 aa8.33□□□□□ -1.08
CTPS1-209ENST00000480420 EDDM13A0A1B0GTR0 161 aa8.33□□□□□ -1.08
CTPS1-209ENST00000480420 TBC1D3FA6NER0 549 aaPredicted RBP8.33□□□□□ -1.08
CTPS1-209ENST00000480420 TBC1D3LB9A6J9 549 aa8.33□□□□□ -1.08
CTPS1-209ENST00000480420 SRGAP2O75044 1071 aa8.33□□□□□ -1.08
CTPS1-209ENST00000480420 CER1O95813 267 aa8.33□□□□□ -1.08
CTPS1-209ENST00000480420 TBC1D3HP0C7X1 549 aa8.33□□□□□ -1.08
CTPS1-209ENST00000480420 VAV1P15498 845 aa8.33□□□□□ -1.08
CTPS1-209ENST00000480420 MZF1P28698 734 aaPredicted RBP8.33□□□□□ -1.08
CTPS1-209ENST00000480420 SLC8A1P32418 973 aa8.33□□□□□ -1.08
CTPS1-209ENST00000480420 CLCN1P35523 988 aa8.33□□□□□ -1.08
CTPS1-209ENST00000480420 BPIFB4P59827 614 aa8.33□□□□□ -1.08
CTPS1-209ENST00000480420 SLC6A3Q01959 620 aa8.33□□□□□ -1.08
CTPS1-209ENST00000480420 DEUP1Q05D60 604 aa8.33□□□□□ -1.08
CTPS1-209ENST00000480420 SFSWAPQ12872 951 aaKnown RBP8.33□□□□□ -1.08
CTPS1-209ENST00000480420 SEMA3BQ13214 749 aa8.33□□□□□ -1.08
CTPS1-209ENST00000480420 ENPP2Q13822 863 aa8.33□□□□□ -1.08
CTPS1-209ENST00000480420 PRAMEF14Q5SWL7 426 aa8.33□□□□□ -1.08
CTPS1-209ENST00000480420 MPP7Q5T2T1 576 aa8.33□□□□□ -1.08
CTPS1-209ENST00000480420 FAM102AQ5T9C2 384 aaPredicted RBP8.33□□□□□ -1.08
CTPS1-209ENST00000480420 TBC1D3GQ6DHY5 549 aa8.33□□□□□ -1.08
CTPS1-209ENST00000480420 TBC1D3CQ6IPX1 549 aa8.33□□□□□ -1.08
CTPS1-209ENST00000480420 FBXL22Q6P050 247 aa8.33□□□□□ -1.08
CTPS1-209ENST00000480420 NCEH1Q6PIU2 408 aa8.33□□□□□ -1.08
CTPS1-209ENST00000480420 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.33□□□□□ -1.08
CTPS1-209ENST00000480420 ERICH1Q86X53 443 aa8.33□□□□□ -1.08
CTPS1-209ENST00000480420 NAXDQ8IW45 347 aa8.33□□□□□ -1.08
CTPS1-209ENST00000480420 TBC1D3Q8IZP1 549 aaPredicted RBP8.33□□□□□ -1.08
CTPS1-209ENST00000480420 CHCHD4Q8N4Q1 142 aa8.33□□□□□ -1.08
CTPS1-209ENST00000480420 WDTC1Q8N5D0 677 aa8.33□□□□□ -1.08
CTPS1-209ENST00000480420 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.33□□□□□ -1.08
CTPS1-209ENST00000480420 TMEM35BQ8NCS4 154 aa8.33□□□□□ -1.08
CTPS1-209ENST00000480420 RHBDD1Q8TEB9 315 aa8.33□□□□□ -1.08
CTPS1-209ENST00000480420 CPA5Q8WXQ8 436 aa8.33□□□□□ -1.08
CTPS1-209ENST00000480420 AZIN2Q96A70 460 aa8.33□□□□□ -1.08
CTPS1-209ENST00000480420 BIRC7Q96CA5 298 aa8.33□□□□□ -1.08
CTPS1-209ENST00000480420 SLC39A13Q96H72 371 aa8.33□□□□□ -1.08
CTPS1-209ENST00000480420 PABPC3Q9H361 631 aaKnown RBP8.33□□□□□ -1.08
CTPS1-209ENST00000480420 WDCPQ9H6R7 721 aa8.33□□□□□ -1.08
CTPS1-209ENST00000480420 SIX2Q9NPC8 291 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms