RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 EIF3CLB5ME19 914 aaKnown RBP9.38□□□□□ -0.91
VCP-206ENST00000480327 CCP110O43303 1012 aa9.38□□□□□ -0.91
VCP-206ENST00000480327 TSPAN3O60637 253 aa9.38□□□□□ -0.91
VCP-206ENST00000480327 NDUFA10O95299 355 aa9.38□□□□□ -0.91
VCP-206ENST00000480327 IGLV3-25P01717 112 aa9.38□□□□□ -0.91
VCP-206ENST00000480327 CYP1A2P05177 515 aa9.38□□□□□ -0.91
VCP-206ENST00000480327 PTMAP06454 111 aaKnown RBP9.38□□□□□ -0.91
VCP-206ENST00000480327 HOXB3P14651 431 aaPredicted RBP9.38□□□□□ -0.91
VCP-206ENST00000480327 PSMA2P25787 234 aa9.38□□□□□ -0.91
VCP-206ENST00000480327 P2RY2P41231 377 aa9.38□□□□□ -0.91
VCP-206ENST00000480327 PTGER3P43115 390 aa9.38□□□□□ -0.91
VCP-206ENST00000480327 MAGEA1P43355 309 aa9.38□□□□□ -0.91
VCP-206ENST00000480327 HARS2P49590 506 aaKnown RBP9.38□□□□□ -0.91
VCP-206ENST00000480327 FOXC1Q12948 553 aa9.38□□□□□ -0.91
VCP-206ENST00000480327 SPA17Q15506 151 aa9.38□□□□□ -0.91
VCP-206ENST00000480327 MAP7D1Q3KQU3 841 aa9.38□□□□□ -0.91
VCP-206ENST00000480327 USP39Q53GS9 565 aaKnown RBP9.38□□□□□ -0.91
VCP-206ENST00000480327 UNQ6494/PRO21346Q6UXR6 183 aa9.38□□□□□ -0.91
VCP-206ENST00000480327 Q6ZNB5 142 aa9.38□□□□□ -0.91
VCP-206ENST00000480327 TPGS1Q6ZTW0 290 aa9.38□□□□□ -0.91
VCP-206ENST00000480327 SND1Q7KZF4 910 aaKnown RBP eCLIP9.38□□□□□ -0.912e-7■■■□□ 17.1
VCP-206ENST00000480327 FAM131BQ86XD5 332 aa9.38□□□□□ -0.91
VCP-206ENST00000480327 LRRC8AQ8IWT6 810 aa9.38□□□□□ -0.91
VCP-206ENST00000480327 TXNDC5Q8NBS9 432 aaKnown RBP9.38□□□□□ -0.91
VCP-206ENST00000480327 ACRBPQ8NEB7 543 aa9.38□□□□□ -0.91
VCP-206ENST00000480327 FAM172AQ8WUF8 416 aa9.38□□□□□ -0.91
VCP-206ENST00000480327 GATA6Q92908 595 aa9.38□□□□□ -0.91
VCP-206ENST00000480327 BHMTQ93088 406 aa9.38□□□□□ -0.91
VCP-206ENST00000480327 EIF3CQ99613 913 aaKnown RBP9.38□□□□□ -0.91
VCP-206ENST00000480327 DESI2Q9BSY9 194 aa9.38□□□□□ -0.91
VCP-206ENST00000480327 DCLK3Q9C098 648 aa9.38□□□□□ -0.91
VCP-206ENST00000480327 MRPL47Q9HD33 250 aaKnown RBP9.38□□□□□ -0.91
VCP-206ENST00000480327 TMPRSS4Q9NRS4 437 aa9.38□□□□□ -0.91
VCP-206ENST00000480327 CTTNBP2NLQ9P2B4 639 aa9.38□□□□□ -0.91
VCP-206ENST00000480327 XPO7Q9UIA9 1087 aaKnown RBP9.38□□□□□ -0.91
VCP-206ENST00000480327 ZMIZ1Q9ULJ6 1067 aa9.38□□□□□ -0.91
VCP-206ENST00000480327 TLR6Q9Y2C9 796 aa9.38□□□□□ -0.91
VCP-206ENST00000480327 PCDHA13Q9Y5I0 950 aa9.38□□□□□ -0.91
VCP-206ENST00000480327 SCINQ9Y6U3 715 aa9.38□□□□□ -0.91
VCP-206ENST00000480327 CELSR3Q9NYQ7 3312 aa9.38□□□□□ -0.91
VCP-206ENST00000480327 ANKRD11Q6UB99 2663 aaPredicted RBP9.38□□□□□ -0.91
VCP-206ENST00000480327 TMEM131Q92545 1883 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 TMEM110-MUSTN1A8MSY1 372 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 SLC9A3R1O14745 358 aaPredicted RBP9.37□□□□□ -0.91
VCP-206ENST00000480327 KHNYNO15037 678 aaKnown RBP9.37□□□□□ -0.91
VCP-206ENST00000480327 TRIM24O15164 1050 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 KAT7O95251 611 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 IPO7O95373 1038 aaKnown RBP9.37□□□□□ -0.91
VCP-206ENST00000480327 LCA5LO95447 670 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 KLF8O95600 359 aaPredicted RBP9.37□□□□□ -0.91
VCP-206ENST00000480327 IGLV3-27P01718 113 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 APOEP02649 317 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 TMEM253P0C7T8 217 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 CSRP1P21291 193 aaKnown RBP9.37□□□□□ -0.91
VCP-206ENST00000480327 RDXP35241 583 aaKnown RBP9.37□□□□□ -0.91
VCP-206ENST00000480327 TIE1P35590 1138 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 GGCXP38435 758 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 PTPN9P43378 593 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 DHPSP49366 369 aaPredicted RBP9.37□□□□□ -0.91
VCP-206ENST00000480327 ZNF143P52747 638 aaPredicted RBP9.37□□□□□ -0.91
VCP-206ENST00000480327 MRPS21P82921 87 aaKnown RBP9.37□□□□□ -0.91
VCP-206ENST00000480327 KDSRQ06136 332 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 RING1Q06587 406 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 NR1H3Q13133 447 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 ANO4Q32M45 955 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 LY6G5CQ5SRR4 150 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 DAB2IPQ5VWQ8 1189 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 NUGGCQ68CJ6 796 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 SCYL2Q6P3W7 929 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 RFWD3Q6PCD5 774 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 ARMCX6Q7L4S7 300 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 ARCQ7LC44 396 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 CYP2U1Q7Z449 544 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 TMEM25Q86YD3 366 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 UNC45BQ8IWX7 931 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 ETFBKMTQ8IXQ9 262 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 TMEFF1Q8IYR6 380 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 KIAA1958Q8N8K9 716 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 KDF1Q8NAX2 398 aaPredicted RBP9.37□□□□□ -0.91
VCP-206ENST00000480327 DEFB124Q8NES8 71 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 PIGKQ92643 395 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 NT5C3BQ969T7 300 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 P2RY11Q96G91 374 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 SLC39A13Q96H72 371 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 ZNF830Q96NB3 372 aaPredicted RBP9.37□□□□□ -0.91
VCP-206ENST00000480327 PNKPQ96T60 521 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 CNPY3Q9BT09 278 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 TKTL2Q9H0I9 626 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 SIK2Q9H0K1 926 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 WDCPQ9H6R7 721 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 CD248Q9HCU0 757 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 OSGEPQ9NPF4 335 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 TMEM9BQ9NQ34 198 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 FSCN3Q9NQT6 498 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 ANLNQ9NQW6 1124 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.37□□□□□ -0.91
VCP-206ENST00000480327 RRN3Q9NYV6 651 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 TBC1D14Q9P2M4 693 aa9.37□□□□□ -0.91
VCP-206ENST00000480327 EVLQ9UI08 416 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms