RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 KIAA1522Q9P206 1035 aaPredicted RBP20.33■□□□□ 0.85
LIME1-205ENST00000480139 ZNF318Q5VUA4 2279 aa20.33■□□□□ 0.84
LIME1-205ENST00000480139 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.32■□□□□ 0.84
LIME1-205ENST00000480139 RCCD1A6NED2 376 aa20.32■□□□□ 0.84
LIME1-205ENST00000480139 PRRT4C9JH25 899 aa20.32■□□□□ 0.84
LIME1-205ENST00000480139 ATG13O75143 517 aa20.32■□□□□ 0.84
LIME1-205ENST00000480139 CNTN5O94779 1100 aa20.32■□□□□ 0.84
LIME1-205ENST00000480139 TCF4P15884 667 aa20.32■□□□□ 0.84
LIME1-205ENST00000480139 CD70P32970 193 aa20.32■□□□□ 0.84
LIME1-205ENST00000480139 CCZ1BP86790 482 aa20.32■□□□□ 0.84
LIME1-205ENST00000480139 CCZ1P86791 482 aaPredicted RBP20.32■□□□□ 0.84
LIME1-205ENST00000480139 LMAN2Q12907 356 aa20.32■□□□□ 0.84
LIME1-205ENST00000480139 ZNF177Q13360 481 aaPredicted RBP20.32■□□□□ 0.84
LIME1-205ENST00000480139 MESDQ14696 234 aa20.32■□□□□ 0.84
LIME1-205ENST00000480139 ALFQ53S48 1182 aa20.32■□□□□ 0.84
LIME1-205ENST00000480139 FSCBQ5H9T9 825 aa20.32■□□□□ 0.84
LIME1-205ENST00000480139 CXorf57Q6NSI4 855 aaKnown RBP20.32■□□□□ 0.84
LIME1-205ENST00000480139 Q6ZS52 159 aa20.32■□□□□ 0.84
LIME1-205ENST00000480139 KIAA1328Q86T90 577 aa20.32■□□□□ 0.84
LIME1-205ENST00000480139 SETD3Q86TU7 594 aaPredicted RBP20.32■□□□□ 0.84
LIME1-205ENST00000480139 SFTPA1Q8IWL2 248 aa20.32■□□□□ 0.84
LIME1-205ENST00000480139 PYROXD2Q8N2H3 581 aa20.32■□□□□ 0.84
LIME1-205ENST00000480139 USP33Q8TEY7 942 aa20.32■□□□□ 0.84
LIME1-205ENST00000480139 MAGEB5Q9BZ81 275 aa20.32■□□□□ 0.84
LIME1-205ENST00000480139 DHX35Q9H5Z1 703 aaKnown RBP20.32■□□□□ 0.84
LIME1-205ENST00000480139 ZNF212Q9UDV6 495 aa20.32■□□□□ 0.84
LIME1-205ENST00000480139 NPC1O15118 1278 aa20.31■□□□□ 0.84
LIME1-205ENST00000480139 RHOQP17081 205 aa20.31■□□□□ 0.84
LIME1-205ENST00000480139 SLC1A1P43005 524 aa20.31■□□□□ 0.84
LIME1-205ENST00000480139 PLK1P53350 603 aa20.31■□□□□ 0.84
LIME1-205ENST00000480139 GAS6Q14393 721 aa20.31■□□□□ 0.84
LIME1-205ENST00000480139 DPYSL2Q16555 572 aa20.31■□□□□ 0.84
LIME1-205ENST00000480139 POLNQ7Z5Q5 900 aa20.31■□□□□ 0.84
LIME1-205ENST00000480139 ADIPOR2Q86V24 386 aa20.31■□□□□ 0.84
LIME1-205ENST00000480139 NLRP14Q86W24 1093 aa20.31■□□□□ 0.84
LIME1-205ENST00000480139 SPEM1Q8N4L4 309 aa20.31■□□□□ 0.84
LIME1-205ENST00000480139 UCMAQ8WVF2 138 aa20.31■□□□□ 0.84
LIME1-205ENST00000480139 PPP1R9BQ96SB3 815 aa20.31■□□□□ 0.84
LIME1-205ENST00000480139 DESI2Q9BSY9 194 aa20.31■□□□□ 0.84
LIME1-205ENST00000480139 LACRTQ9GZZ8 138 aa20.31■□□□□ 0.84
LIME1-205ENST00000480139 TMEM248Q9NWD8 314 aa20.31■□□□□ 0.84
LIME1-205ENST00000480139 ELOVL2Q9NXB9 296 aa20.31■□□□□ 0.84
LIME1-205ENST00000480139 MPP6Q9NZW5 540 aa20.31■□□□□ 0.84
LIME1-205ENST00000480139 TFR2Q9UP52 801 aa20.31■□□□□ 0.84
LIME1-205ENST00000480139 ADGRG1Q9Y653 693 aa20.31■□□□□ 0.84
LIME1-205ENST00000480139 MUC22E2RYF6 1773 aaPredicted RBP20.31■□□□□ 0.84
LIME1-205ENST00000480139 FGF10O15520 208 aaPredicted RBP20.3■□□□□ 0.84
LIME1-205ENST00000480139 RARAP10276 462 aa20.3■□□□□ 0.84
LIME1-205ENST00000480139 HNRNPLP14866 589 aaKnown RBP eCLIP20.3■□□□□ 0.84
LIME1-205ENST00000480139 NOP2P46087 812 aaKnown RBP20.3■□□□□ 0.84
LIME1-205ENST00000480139 HCAR3P49019 387 aa20.3■□□□□ 0.84
LIME1-205ENST00000480139 MAPKAPK2P49137 400 aa20.3■□□□□ 0.84
LIME1-205ENST00000480139 KIF5AQ12840 1032 aa20.3■□□□□ 0.84
LIME1-205ENST00000480139 MTAPQ13126 283 aa20.3■□□□□ 0.84
LIME1-205ENST00000480139 CA9Q16790 459 aa20.3■□□□□ 0.84
LIME1-205ENST00000480139 FUT11Q495W5 492 aa20.3■□□□□ 0.84
LIME1-205ENST00000480139 C6orf118Q5T5N4 469 aa20.3■□□□□ 0.84
LIME1-205ENST00000480139 TMEM215Q68D42 235 aa20.3■□□□□ 0.84
LIME1-205ENST00000480139 C11orf63Q6NUN7 778 aa20.3■□□□□ 0.84
LIME1-205ENST00000480139 RWDD4Q6NW29 188 aaKnown RBP20.3■□□□□ 0.84
LIME1-205ENST00000480139 ZNF783Q6ZMS7 281 aa20.3■□□□□ 0.84
LIME1-205ENST00000480139 TRMT11Q7Z4G4 463 aaKnown RBP20.3■□□□□ 0.84
LIME1-205ENST00000480139 DTWD2Q8NBA8 298 aa20.3■□□□□ 0.84
LIME1-205ENST00000480139 TTC17Q96AE7 1141 aa20.3■□□□□ 0.84
LIME1-205ENST00000480139 ACDQ96AP0 544 aa20.3■□□□□ 0.84
LIME1-205ENST00000480139 KCTD15Q96SI1 283 aaPredicted RBP20.3■□□□□ 0.84
LIME1-205ENST00000480139 GPATCH2LQ9NWQ4 482 aa20.3■□□□□ 0.84
LIME1-205ENST00000480139 HCN2Q9UL51 889 aa20.3■□□□□ 0.84
LIME1-205ENST00000480139 CHD5Q8TDI0 1954 aa20.3■□□□□ 0.84
LIME1-205ENST00000480139 WASH4PA8MWX3 477 aa20.29■□□□□ 0.84
LIME1-205ENST00000480139 CREB3O43889 395 aa20.29■□□□□ 0.84
LIME1-205ENST00000480139 PAPSS2O95340 614 aaPredicted RBP20.29■□□□□ 0.84
LIME1-205ENST00000480139 MOCS3O95396 460 aa20.29■□□□□ 0.84
LIME1-205ENST00000480139 KRT7P08729 469 aa20.29■□□□□ 0.84
LIME1-205ENST00000480139 EPHB2P29323 1055 aa20.29■□□□□ 0.84
LIME1-205ENST00000480139 OR1E1P30953 314 aa20.29■□□□□ 0.84
LIME1-205ENST00000480139 SEC13P55735 322 aa20.29■□□□□ 0.84
LIME1-205ENST00000480139 TPI1P60174 286 aa20.29■□□□□ 0.84
LIME1-205ENST00000480139 PLEKHG6Q3KR16 790 aa20.29■□□□□ 0.84
LIME1-205ENST00000480139 PITRM1Q5JRX3 1037 aa20.29■□□□□ 0.84
LIME1-205ENST00000480139 KCNT1Q5JUK3 1230 aa20.29■□□□□ 0.84
LIME1-205ENST00000480139 LRRC38Q5VT99 294 aa20.29■□□□□ 0.84
LIME1-205ENST00000480139 TXNRD3NBQ6F5E7 133 aa20.29■□□□□ 0.84
LIME1-205ENST00000480139 TFAP2DQ7Z6R9 452 aa20.29■□□□□ 0.84
LIME1-205ENST00000480139 ZNF513Q8N8E2 541 aaPredicted RBP20.29■□□□□ 0.84
LIME1-205ENST00000480139 IL17RCQ8NAC3 791 aa20.29■□□□□ 0.84
LIME1-205ENST00000480139 RPLP0P6Q8NHW5 317 aa20.29■□□□□ 0.84
LIME1-205ENST00000480139 FAM71BQ8TC56 605 aa20.29■□□□□ 0.84
LIME1-205ENST00000480139 CATSPERBQ9H7T0 1116 aa20.29■□□□□ 0.84
LIME1-205ENST00000480139 ZWILCHQ9H900 591 aa20.29■□□□□ 0.84
LIME1-205ENST00000480139 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.29■□□□□ 0.84
LIME1-205ENST00000480139 DONSONQ9NYP3 566 aa20.29■□□□□ 0.84
LIME1-205ENST00000480139 SALL4Q9UJQ4 1053 aa20.29■□□□□ 0.84
LIME1-205ENST00000480139 INTS6Q9UL03 887 aaKnown RBP20.29■□□□□ 0.84
LIME1-205ENST00000480139 ILVBLA1L0T0 632 aa20.28■□□□□ 0.84
LIME1-205ENST00000480139 TMEM110-MUSTN1A8MSY1 372 aa20.28■□□□□ 0.84
LIME1-205ENST00000480139 EEF2KO00418 725 aaKnown RBP20.28■□□□□ 0.84
LIME1-205ENST00000480139 BUB1BO60566 1050 aaPredicted RBP20.28■□□□□ 0.84
LIME1-205ENST00000480139 ASLP04424 464 aa20.28■□□□□ 0.84
LIME1-205ENST00000480139 ATP5BP06576 529 aaKnown RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms