RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 TCEAL1Q15170 157 aa11.15□□□□□ -0.62
ATG4B-219ENST00000479941 PLEKHG6Q3KR16 790 aa11.15□□□□□ -0.62
ATG4B-219ENST00000479941 BOLA3Q53S33 107 aa11.15□□□□□ -0.62
ATG4B-219ENST00000479941 ALFQ53S48 1182 aa11.15□□□□□ -0.62
ATG4B-219ENST00000479941 FSCBQ5H9T9 825 aa11.15□□□□□ -0.62
ATG4B-219ENST00000479941 EOGTQ5NDL2 527 aa11.15□□□□□ -0.62
ATG4B-219ENST00000479941 C6orf118Q5T5N4 469 aa11.15□□□□□ -0.62
ATG4B-219ENST00000479941 MANEALQ5VSG8 457 aa11.15□□□□□ -0.62
ATG4B-219ENST00000479941 TMEM215Q68D42 235 aa11.15□□□□□ -0.62
ATG4B-219ENST00000479941 SDE2Q6IQ49 451 aa11.15□□□□□ -0.62
ATG4B-219ENST00000479941 PKN3Q6P5Z2 889 aa11.15□□□□□ -0.62
ATG4B-219ENST00000479941 SETD3Q86TU7 594 aaPredicted RBP11.15□□□□□ -0.62
ATG4B-219ENST00000479941 ADIPOR2Q86V24 386 aa11.15□□□□□ -0.62
ATG4B-219ENST00000479941 CIR1Q86X95 450 aaPredicted RBP11.15□□□□□ -0.62
ATG4B-219ENST00000479941 CHPFQ8IZ52 775 aa11.15□□□□□ -0.62
ATG4B-219ENST00000479941 ALLCQ8N6M5 410 aa11.15□□□□□ -0.62
ATG4B-219ENST00000479941 TXNDC5Q8NBS9 432 aaKnown RBP11.15□□□□□ -0.62
ATG4B-219ENST00000479941 SLC35G2Q8TBE7 412 aa11.15□□□□□ -0.62
ATG4B-219ENST00000479941 RFFLQ8WZ73 363 aa11.15□□□□□ -0.62
ATG4B-219ENST00000479941 TBC1D31Q96DN5 1066 aa11.15□□□□□ -0.62
ATG4B-219ENST00000479941 LMLNQ96KR4 655 aa11.15□□□□□ -0.62
ATG4B-219ENST00000479941 EPAS1Q99814 870 aa11.15□□□□□ -0.62
ATG4B-219ENST00000479941 IRF2BPLQ9H1B7 796 aa11.15□□□□□ -0.62
ATG4B-219ENST00000479941 THAP10Q9P2Z0 257 aaPredicted RBP11.15□□□□□ -0.62
ATG4B-219ENST00000479941 PCSK1NQ9UHG2 260 aa11.15□□□□□ -0.62
ATG4B-219ENST00000479941 HCN2Q9UL51 889 aa11.15□□□□□ -0.62
ATG4B-219ENST00000479941 PLA2G4CQ9UP65 541 aa11.15□□□□□ -0.62
ATG4B-219ENST00000479941 AP4E1Q9UPM8 1137 aa11.15□□□□□ -0.62
ATG4B-219ENST00000479941 SLC8A2Q9UPR5 921 aa11.15□□□□□ -0.62
ATG4B-219ENST00000479941 TBC1D30Q9Y2I9 924 aa11.15□□□□□ -0.62
ATG4B-219ENST00000479941 PCDHA13Q9Y5I0 950 aa11.15□□□□□ -0.62
ATG4B-219ENST00000479941 ATG2BQ96BY7 2078 aa11.14□□□□□ -0.63
ATG4B-219ENST00000479941 ANTXRLA6NF34 631 aa11.14□□□□□ -0.63
ATG4B-219ENST00000479941 FAM72CH0Y354 149 aa11.14□□□□□ -0.63
ATG4B-219ENST00000479941 MTA2O94776 668 aa11.14□□□□□ -0.63
ATG4B-219ENST00000479941 PROSCO94903 275 aa11.14□□□□□ -0.63
ATG4B-219ENST00000479941 KLF8O95600 359 aaPredicted RBP11.14□□□□□ -0.63
ATG4B-219ENST00000479941 ASLP04424 464 aa11.14□□□□□ -0.63
ATG4B-219ENST00000479941 DLDP09622 509 aaKnown RBP11.14□□□□□ -0.63
ATG4B-219ENST00000479941 RHOQP17081 205 aa11.14□□□□□ -0.63
ATG4B-219ENST00000479941 IRAK1P51617 712 aa11.14□□□□□ -0.63
ATG4B-219ENST00000479941 ZNF135P52742 658 aaPredicted RBP11.14□□□□□ -0.63
ATG4B-219ENST00000479941 PLK1P53350 603 aa11.14□□□□□ -0.63
ATG4B-219ENST00000479941 PTPN5P54829 565 aa11.14□□□□□ -0.63
ATG4B-219ENST00000479941 SATB1Q01826 763 aa11.14□□□□□ -0.63
ATG4B-219ENST00000479941 CSTF1Q05048 431 aaKnown RBP11.14□□□□□ -0.63
ATG4B-219ENST00000479941 SULT2A1Q06520 285 aa11.14□□□□□ -0.63
ATG4B-219ENST00000479941 SEMA3BQ13214 749 aa11.14□□□□□ -0.63
ATG4B-219ENST00000479941 CRY1Q16526 586 aa11.14□□□□□ -0.63
ATG4B-219ENST00000479941 HADHQ16836 314 aaKnown RBP11.14□□□□□ -0.63
ATG4B-219ENST00000479941 ZNF528Q3MIS6 628 aa11.14□□□□□ -0.63
ATG4B-219ENST00000479941 PITRM1Q5JRX3 1037 aa11.14□□□□□ -0.63
ATG4B-219ENST00000479941 ARTNQ5T4W7 220 aa11.14□□□□□ -0.63
ATG4B-219ENST00000479941 FAM72AQ5TYM5 149 aa11.14□□□□□ -0.63
ATG4B-219ENST00000479941 EGFLAMQ63HQ2 1017 aa11.14□□□□□ -0.63
ATG4B-219ENST00000479941 MBLAC2Q68D91 279 aa11.14□□□□□ -0.63
ATG4B-219ENST00000479941 FAM72DQ6L9T8 149 aa11.14□□□□□ -0.63
ATG4B-219ENST00000479941 CXorf57Q6NSI4 855 aaKnown RBP11.14□□□□□ -0.63
ATG4B-219ENST00000479941 RWDD4Q6NW29 188 aaKnown RBP11.14□□□□□ -0.63
ATG4B-219ENST00000479941 RAD9BQ6WBX8 426 aa11.14□□□□□ -0.63
ATG4B-219ENST00000479941 FAM72BQ86X60 149 aa11.14□□□□□ -0.63
ATG4B-219ENST00000479941 TMEM139Q8IV31 216 aa11.14□□□□□ -0.63
ATG4B-219ENST00000479941 MAML2Q8IZL2 1156 aaPredicted RBP11.14□□□□□ -0.63
ATG4B-219ENST00000479941 PYROXD2Q8N2H3 581 aa11.14□□□□□ -0.63
ATG4B-219ENST00000479941 CAMKK1Q8N5S9 505 aa11.14□□□□□ -0.63
ATG4B-219ENST00000479941 PRSS33Q8NF86 280 aa11.14□□□□□ -0.63
ATG4B-219ENST00000479941 TTC17Q96AE7 1141 aa11.14□□□□□ -0.63
ATG4B-219ENST00000479941 BTBD6Q96KE9 485 aa11.14□□□□□ -0.63
ATG4B-219ENST00000479941 PEBP4Q96S96 227 aa11.14□□□□□ -0.63
ATG4B-219ENST00000479941 GABRG3Q99928 467 aa11.14□□□□□ -0.63
ATG4B-219ENST00000479941 SNRNP25Q9BV90 132 aaKnown RBP11.14□□□□□ -0.63
ATG4B-219ENST00000479941 FAM126AQ9BYI3 521 aaPredicted RBP11.14□□□□□ -0.63
ATG4B-219ENST00000479941 OSGEPQ9NPF4 335 aa11.14□□□□□ -0.63
ATG4B-219ENST00000479941 MPP6Q9NZW5 540 aa11.14□□□□□ -0.63
ATG4B-219ENST00000479941 ARIH1Q9Y4X5 557 aaPredicted RBP11.14□□□□□ -0.63
ATG4B-219ENST00000479941 WDR87Q6ZQQ6 2873 aa11.14□□□□□ -0.63
ATG4B-219ENST00000479941 VPS13AQ96RL7 3174 aa11.14□□□□□ -0.63
ATG4B-219ENST00000479941 MYO18AQ92614 2054 aaKnown RBP11.13□□□□□ -0.63
ATG4B-219ENST00000479941 SGK1O00141 431 aa11.13□□□□□ -0.63
ATG4B-219ENST00000479941 CREB3O43889 395 aa11.13□□□□□ -0.63
ATG4B-219ENST00000479941 ADAM23O75077 832 aa11.13□□□□□ -0.63
ATG4B-219ENST00000479941 RHOCP08134 193 aa11.13□□□□□ -0.63
ATG4B-219ENST00000479941 EPHB2P29323 1055 aa11.13□□□□□ -0.63
ATG4B-219ENST00000479941 OR1E1P30953 314 aa11.13□□□□□ -0.63
ATG4B-219ENST00000479941 HOXA6P31267 233 aa11.13□□□□□ -0.63
ATG4B-219ENST00000479941 HOXC13P31276 330 aa11.13□□□□□ -0.63
ATG4B-219ENST00000479941 MAN1A1P33908 653 aa11.13□□□□□ -0.63
ATG4B-219ENST00000479941 CSKP41240 450 aa11.13□□□□□ -0.63
ATG4B-219ENST00000479941 MAPKAPK2P49137 400 aa11.13□□□□□ -0.63
ATG4B-219ENST00000479941 DGKEP52429 567 aa11.13□□□□□ -0.63
ATG4B-219ENST00000479941 NRLP54845 237 aa11.13□□□□□ -0.63
ATG4B-219ENST00000479941 KRT83P78385 493 aa11.13□□□□□ -0.63
ATG4B-219ENST00000479941 TCF15Q12870 199 aa11.13□□□□□ -0.63
ATG4B-219ENST00000479941 ENPP2Q13822 863 aa11.13□□□□□ -0.63
ATG4B-219ENST00000479941 FUT11Q495W5 492 aa11.13□□□□□ -0.63
ATG4B-219ENST00000479941 ZNF783Q6ZMS7 281 aa11.13□□□□□ -0.63
ATG4B-219ENST00000479941 CYP4V2Q6ZWL3 525 aaPredicted RBP11.13□□□□□ -0.63
ATG4B-219ENST00000479941 TFAP2DQ7Z6R9 452 aa11.13□□□□□ -0.63
ATG4B-219ENST00000479941 NLRP14Q86W24 1093 aa11.13□□□□□ -0.63
ATG4B-219ENST00000479941 TXLNBQ8N3L3 684 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms