RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-208ENST00000479003 NOMO2Q5JPE7 1267 aa28.24■■■□□ 2.11
CHKB-208ENST00000479003 MROH9Q5TGP6 573 aa28.24■■■□□ 2.11
CHKB-208ENST00000479003 BNIPLQ7Z465 357 aa28.24■■■□□ 2.11
CHKB-208ENST00000479003 LGMNQ99538 433 aa28.24■■■□□ 2.11
CHKB-208ENST00000479003 DUSP16Q9BY84 665 aa28.24■■■□□ 2.11
CHKB-208ENST00000479003 EIF2B3Q9NR50 452 aaKnown RBP28.24■■■□□ 2.11
CHKB-208ENST00000479003 RPSAP08865 295 aaKnown RBP28.24■■■□□ 2.11
CHKB-208ENST00000479003 GM2AP17900 193 aa28.24■■■□□ 2.11
CHKB-208ENST00000479003 ADIGQ0VDE8 80 aa28.24■■■□□ 2.11
CHKB-208ENST00000479003 LRRC8BQ6P9F7 803 aa28.24■■■□□ 2.11
CHKB-208ENST00000479003 NDUFAF2Q8N183 169 aa28.24■■■□□ 2.11
CHKB-208ENST00000479003 COLGALT1Q8NBJ5 622 aa28.24■■■□□ 2.11
CHKB-208ENST00000479003 B3GALNT2Q8NCR0 500 aa28.24■■■□□ 2.11
CHKB-208ENST00000479003 NT5C3BQ969T7 300 aa28.24■■■□□ 2.11
CHKB-208ENST00000479003 PAWRQ96IZ0 340 aaKnown RBP28.24■■■□□ 2.11
CHKB-208ENST00000479003 BTBD10Q9BSF8 475 aa28.24■■■□□ 2.11
CHKB-208ENST00000479003 KCNK4Q9NYG8 393 aa28.24■■■□□ 2.11
CHKB-208ENST00000479003 NKX1-2Q9UD57 310 aaPredicted RBP28.24■■■□□ 2.11
CHKB-208ENST00000479003 FAM237BA0A1B0GVD1 139 aa28.23■■■□□ 2.11
CHKB-208ENST00000479003 CALB2P22676 271 aa28.23■■■□□ 2.11
CHKB-208ENST00000479003 TMPRSS15P98073 1019 aa28.23■■■□□ 2.11
CHKB-208ENST00000479003 OCRLQ01968 901 aa28.23■■■□□ 2.11
CHKB-208ENST00000479003 TEX44Q53QW1 395 aa28.23■■■□□ 2.11
CHKB-208ENST00000479003 KIAA0319Q5VV43 1072 aa28.23■■■□□ 2.11
CHKB-208ENST00000479003 MARK2Q7KZI7 788 aaKnown RBP28.23■■■□□ 2.11
CHKB-208ENST00000479003 DEFB128Q7Z7B8 93 aa28.23■■■□□ 2.11
CHKB-208ENST00000479003 NUDCD3Q8IVD9 361 aa28.23■■■□□ 2.11
CHKB-208ENST00000479003 FAM149B1Q96BN6 582 aa28.23■■■□□ 2.11
CHKB-208ENST00000479003 PRR11Q96HE9 360 aaPredicted RBP28.23■■■□□ 2.11
CHKB-208ENST00000479003 CADM1Q9BY67 442 aaKnown RBP28.23■■■□□ 2.11
CHKB-208ENST00000479003 TBC1D13Q9NVG8 400 aa28.23■■■□□ 2.11
CHKB-208ENST00000479003 TBX21Q9UL17 535 aa28.23■■■□□ 2.11
CHKB-208ENST00000479003 SF3B1O75533 1304 aaKnown RBP eCLIP28.23■■■□□ 2.11
CHKB-208ENST00000479003 WDR27A2RRH5 827 aa28.22■■■□□ 2.11
CHKB-208ENST00000479003 BIRC5O15392 142 aa28.22■■■□□ 2.11
CHKB-208ENST00000479003 CXCL10P02778 98 aa28.22■■■□□ 2.11
CHKB-208ENST00000479003 NOS2P35228 1153 aa28.22■■■□□ 2.11
CHKB-208ENST00000479003 GLUD2P49448 558 aa28.22■■■□□ 2.11
CHKB-208ENST00000479003 RNF139Q8WU17 664 aa28.22■■■□□ 2.11
CHKB-208ENST00000479003 NDRG1Q92597 394 aaKnown RBP28.22■■■□□ 2.11
CHKB-208ENST00000479003 NPY6RQ99463 290 aa28.22■■■□□ 2.11
CHKB-208ENST00000479003 DDX43Q9NXZ2 648 aaKnown RBP28.22■■■□□ 2.11
CHKB-208ENST00000479003 TSC2P49815 1807 aa28.22■■■□□ 2.11
CHKB-208ENST00000479003 SDR42E2A6NKP2 422 aa28.22■■■□□ 2.11
CHKB-208ENST00000479003 H3BRJ5 948 aa28.22■■■□□ 2.11
CHKB-208ENST00000479003 OPHN1O60890 802 aa28.22■■■□□ 2.11
CHKB-208ENST00000479003 GNAZP19086 355 aa28.22■■■□□ 2.11
CHKB-208ENST00000479003 CDK18Q07002 472 aa28.22■■■□□ 2.11
CHKB-208ENST00000479003 DSC1Q08554 894 aa28.22■■■□□ 2.11
CHKB-208ENST00000479003 NIPAL4Q0D2K0 466 aa28.22■■■□□ 2.11
CHKB-208ENST00000479003 CHI3L2Q15782 390 aa28.22■■■□□ 2.11
CHKB-208ENST00000479003 DCAF6Q58WW2 860 aa28.22■■■□□ 2.11
CHKB-208ENST00000479003 CES4AQ5XG92 561 aa28.22■■■□□ 2.11
CHKB-208ENST00000479003 ENDOVQ8N8Q3 282 aaKnown RBP28.22■■■□□ 2.11
CHKB-208ENST00000479003 UROC1Q96N76 676 aa28.22■■■□□ 2.11
CHKB-208ENST00000479003 DENND2DQ9H6A0 471 aaPredicted RBP28.22■■■□□ 2.11
CHKB-208ENST00000479003 LOC101059915A0A1B0GWI6 518 aaPredicted RBP28.21■■■□□ 2.11
CHKB-208ENST00000479003 STK10O94804 968 aaKnown RBP28.21■■■□□ 2.11
CHKB-208ENST00000479003 BPGMP07738 259 aa28.21■■■□□ 2.11
CHKB-208ENST00000479003 HSPA1AP0DMV8 641 aaKnown RBP28.21■■■□□ 2.11
CHKB-208ENST00000479003 HSPA1BP0DMV9 641 aaKnown RBP28.21■■■□□ 2.11
CHKB-208ENST00000479003 GATMP50440 423 aa28.21■■■□□ 2.11
CHKB-208ENST00000479003 SLC8A3P57103 927 aa28.21■■■□□ 2.11
CHKB-208ENST00000479003 TMEM86AQ8N2M4 240 aa28.21■■■□□ 2.11
CHKB-208ENST00000479003 STKLD1Q8NE28 680 aa28.21■■■□□ 2.11
CHKB-208ENST00000479003 URGCPQ8TCY9 931 aa28.21■■■□□ 2.11
CHKB-208ENST00000479003 KCTD13Q8WZ19 329 aa28.21■■■□□ 2.11
CHKB-208ENST00000479003 ELAC1Q9H777 363 aaKnown RBP28.21■■■□□ 2.11
CHKB-208ENST00000479003 PCDHB7Q9Y5E2 793 aa28.21■■■□□ 2.11
CHKB-208ENST00000479003 TTC3P53804 2025 aa28.21■■■□□ 2.11
CHKB-208ENST00000479003 MYO18AQ92614 2054 aaKnown RBP28.21■■■□□ 2.11
CHKB-208ENST00000479003 C2orf71A6NGG8 1288 aa28.21■■■□□ 2.11
CHKB-208ENST00000479003 E7ENQ6 273 aa28.21■■■□□ 2.11
CHKB-208ENST00000479003 RNF103O00237 685 aa28.21■■■□□ 2.11
CHKB-208ENST00000479003 FCHO1O14526 889 aa28.21■■■□□ 2.11
CHKB-208ENST00000479003 PITX1P78337 314 aaPredicted RBP28.21■■■□□ 2.11
CHKB-208ENST00000479003 LRRC26Q2I0M4 334 aa28.21■■■□□ 2.11
CHKB-208ENST00000479003 CCNJLQ8IV13 435 aa28.21■■■□□ 2.11
CHKB-208ENST00000479003 PDCD7Q8N8D1 485 aaKnown RBP28.21■■■□□ 2.11
CHKB-208ENST00000479003 P2RY11Q96G91 374 aa28.21■■■□□ 2.11
CHKB-208ENST00000479003 SNNO75324 88 aaPredicted RBP28.2■■■□□ 2.1
CHKB-208ENST00000479003 FAM163BP0C2L3 166 aa28.2■■■□□ 2.1
CHKB-208ENST00000479003 NPR3P17342 541 aa28.2■■■□□ 2.1
CHKB-208ENST00000479003 NUDCD1Q96RS6 583 aa28.2■■■□□ 2.1
CHKB-208ENST00000479003 C11orf49Q9H6J7 331 aa28.2■■■□□ 2.1
CHKB-208ENST00000479003 DNAJB4Q9UDY4 337 aa28.2■■■□□ 2.1
CHKB-208ENST00000479003 GSC2O15499 205 aa28.19■■■□□ 2.1
CHKB-208ENST00000479003 TPBGLP0DKB5 382 aa28.19■■■□□ 2.1
CHKB-208ENST00000479003 PDK1Q15118 436 aa28.19■■■□□ 2.1
CHKB-208ENST00000479003 DBN1Q16643 649 aa28.19■■■□□ 2.1
CHKB-208ENST00000479003 STXBP5Q5T5C0 1151 aa28.19■■■□□ 2.1
CHKB-208ENST00000479003 COLGALT2Q8IYK4 626 aa28.19■■■□□ 2.1
CHKB-208ENST00000479003 ACMSDQ8TDX5 336 aa28.19■■■□□ 2.1
CHKB-208ENST00000479003 ANKRD27Q96NW4 1050 aa28.19■■■□□ 2.1
CHKB-208ENST00000479003 FERMT1Q9BQL6 677 aa28.19■■■□□ 2.1
CHKB-208ENST00000479003 TMEM39AQ9NV64 488 aa28.19■■■□□ 2.1
CHKB-208ENST00000479003 STAP1Q9ULZ2 295 aa28.19■■■□□ 2.1
CHKB-208ENST00000479003 ODC1P11926 461 aa28.19■■■□□ 2.1
CHKB-208ENST00000479003 PTPN1P18031 435 aaKnown RBP28.19■■■□□ 2.1
CHKB-208ENST00000479003 AP1B1Q10567 949 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms