RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 CHPF2Q9P2E5 772 aa1.6□□□□□ -2.15
SRRM1-211ENST00000478890 MAN2B2Q9Y2E5 1009 aa1.6□□□□□ -2.15
SRRM1-211ENST00000478890 PTGDR2Q9Y5Y4 395 aa1.6□□□□□ -2.15
SRRM1-211ENST00000478890 CECR2Q9BXF3 1484 aa1.6□□□□□ -2.15
SRRM1-211ENST00000478890 DCAF1Q9Y4B6 1507 aa1.6□□□□□ -2.15
SRRM1-211ENST00000478890 TBC1D3DA0A087WVF3 549 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 TBC1D3IA0A087WXS9 549 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 A0A087WZ62 844 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 TBC1D3EA0A087X179 549 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 TBC1D3KA0A087X1G2 549 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 PLSCR5A0PG75 271 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 FAM234BA2RU67 622 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 TBC1D3BA6NDS4 549 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 TBC1D3FA6NER0 549 aaPredicted RBP1.59□□□□□ -2.15
SRRM1-211ENST00000478890 GAGE12JA6NER3 117 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 C3orf70A6NLC5 250 aaPredicted RBP1.59□□□□□ -2.15
SRRM1-211ENST00000478890 TBC1D3LB9A6J9 549 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 AREL1O15033 823 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 CBFA2T3O75081 653 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 LDB3O75112 727 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 ATG13O75143 517 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 SGPL1O95470 568 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 IFNA2P01563 188 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 MYL3P08590 195 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 FGF2P09038 288 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 HOXC6P09630 235 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 RFPL3SP0C7P2 107 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 TBC1D3HP0C7X1 549 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 PKMP14618 531 aaKnown RBP1.59□□□□□ -2.15
SRRM1-211ENST00000478890 TSHRP16473 764 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 EGR1P18146 543 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 STAT1P42224 750 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 CYP2J2P51589 502 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 ALDH18A1P54886 795 aaKnown RBP1.59□□□□□ -2.15
SRRM1-211ENST00000478890 DSCR9P59020 149 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 TAS2R50P59544 299 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 CRYZQ08257 329 aaKnown RBP1.59□□□□□ -2.15
SRRM1-211ENST00000478890 DSC1Q08554 894 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 ZNF543Q08ER8 600 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 KEAP1Q14145 624 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 SLC39A14Q15043 492 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 SLC4A8Q2Y0W8 1093 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 ARL13BQ3SXY8 428 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 INO80DQ53TQ3 878 aaPredicted RBP1.59□□□□□ -2.15
SRRM1-211ENST00000478890 FSCBQ5H9T9 825 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 KIAA1755Q5JYT7 1200 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 DGKKQ5KSL6 1271 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 ZNF569Q5MCW4 686 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 Q5PR19 223 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 C9orf50Q5SZB4 431 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 FNBP1LQ5T0N5 605 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 TBC1D3GQ6DHY5 549 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 TBC1D3CQ6IPX1 549 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 TMEM88Q6PEY1 159 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 C16orf89Q6UX73 402 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 KLBQ86Z14 1044 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 FAM217AQ8IXS0 508 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 TBC1D3Q8IZP1 549 aaPredicted RBP1.59□□□□□ -2.15
SRRM1-211ENST00000478890 SLC25A41Q8N5S1 370 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 LRRC57Q8N9N7 239 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 OR52N4Q8NGI2 321 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 OR14A16Q8NHC5 309 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 SLC22A17Q8WUG5 538 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 DNASE2BQ8WZ79 361 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 NPIPB3Q92617 1050 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 INPP5DQ92835 1189 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 TSR2Q969E8 191 aaKnown RBP1.59□□□□□ -2.15
SRRM1-211ENST00000478890 ZNF566Q969W8 418 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 MSI2Q96DH6 328 aaKnown RBP1.59□□□□□ -2.15
SRRM1-211ENST00000478890 ZNF347Q96SE7 839 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 EPYCQ99645 322 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 NUDT22Q9BRQ3 303 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 LDHAL6BQ9BYZ2 381 aaPredicted RBP1.59□□□□□ -2.15
SRRM1-211ENST00000478890 CCDC134Q9H6E4 229 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 RETREG1Q9H6L5 497 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 SFXN1Q9H9B4 322 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 MAP6D1Q9H9H5 199 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 PLAC1Q9HBJ0 212 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 HELLSQ9NRZ9 838 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 GJB4Q9NTQ9 266 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 RGS17Q9UGC6 210 aaPredicted RBP1.59□□□□□ -2.15
SRRM1-211ENST00000478890 SLC25A13Q9UJS0 675 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 FBXO4Q9UKT5 387 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 RAB21Q9UL25 225 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 TRPC5Q9UL62 973 aaPredicted RBP1.59□□□□□ -2.15
SRRM1-211ENST00000478890 RAP2CQ9Y3L5 183 aa1.59□□□□□ -2.15
SRRM1-211ENST00000478890 BAZ1BQ9UIG0 1483 aaKnown RBP1.58□□□□□ -2.16
SRRM1-211ENST00000478890 A0A1W2PPC4 97 aa1.58□□□□□ -2.16
SRRM1-211ENST00000478890 MS4A18H0YCH9 400 aa1.58□□□□□ -2.16
SRRM1-211ENST00000478890 VWA5AO00534 786 aa1.58□□□□□ -2.16
SRRM1-211ENST00000478890 SPRY3O43610 288 aa1.58□□□□□ -2.16
SRRM1-211ENST00000478890 PEX14O75381 377 aa1.58□□□□□ -2.16
SRRM1-211ENST00000478890 GAS8-AS1O95177 125 aa1.58□□□□□ -2.16
SRRM1-211ENST00000478890 ITGA5P08648 1049 aa1.58□□□□□ -2.16
SRRM1-211ENST00000478890 HARSP12081 509 aaKnown RBP1.58□□□□□ -2.16
SRRM1-211ENST00000478890 PEPDP12955 493 aa1.58□□□□□ -2.16
SRRM1-211ENST00000478890 ARSBP15848 533 aa1.58□□□□□ -2.16
SRRM1-211ENST00000478890 KLRC2P26717 231 aa1.58□□□□□ -2.16
SRRM1-211ENST00000478890 HOXD3P31249 432 aaPredicted RBP1.58□□□□□ -2.16
SRRM1-211ENST00000478890 PRIM2P49643 509 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms