RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 SMPD1P17405 629 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 PLK1P53350 603 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 GRIK3Q13003 919 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 RCN1Q15293 331 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 SPDYE7PQ495Y7 208 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 GALNTL6Q49A17 601 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 DCLRE1AQ6PJP8 1040 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 TAGAPQ8N103 731 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 CLEC4FQ8N1N0 589 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 TDRD5Q8NAT2 981 aaKnown RBP14.51□□□□□ -0.09
NPHP4-208ENST00000478423 GMLQ99445 158 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 ECSITQ9BQ95 431 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 THUMPD3Q9BV44 507 aaKnown RBP14.51□□□□□ -0.09
NPHP4-208ENST00000478423 IL22Q9GZX6 179 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 PCDH18Q9HCL0 1135 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 TCF7L2Q9NQB0 619 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 THAP1Q9NVV9 213 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 SPASTQ9UBP0 616 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 SLC4A7Q9Y6M7 1214 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 TCRBV7S2A1N4TA0A589 114 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 DDX3YO15523 660 aaKnown RBP14.51□□□□□ -0.09
NPHP4-208ENST00000478423 MPOP05164 745 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 KRT16P08779 473 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 DDX5P17844 614 aaKnown RBP14.51□□□□□ -0.09
NPHP4-208ENST00000478423 NOL9Q5SY16 702 aaKnown RBP14.51□□□□□ -0.09
NPHP4-208ENST00000478423 IQCKQ8N0W5 287 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 RASGEF1CQ8N431 466 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 LRRC57Q8N9N7 239 aa14.51□□□□□ -0.09
NPHP4-208ENST00000478423 NUDT17P0C025 328 aa14.5□□□□□ -0.09
NPHP4-208ENST00000478423 ITGB6P18564 788 aa14.5□□□□□ -0.09
NPHP4-208ENST00000478423 MZF1P28698 734 aaPredicted RBP14.5□□□□□ -0.09
NPHP4-208ENST00000478423 RPA3P35244 121 aaPredicted RBP14.5□□□□□ -0.09
NPHP4-208ENST00000478423 SLC1A6P48664 564 aa14.5□□□□□ -0.09
NPHP4-208ENST00000478423 DDR2Q16832 855 aa14.5□□□□□ -0.09
NPHP4-208ENST00000478423 C16orf59Q7L2K0 433 aa14.5□□□□□ -0.09
NPHP4-208ENST00000478423 EIF2AQ9BY44 585 aaKnown RBP14.5□□□□□ -0.09
NPHP4-208ENST00000478423 PADI3Q9ULW8 664 aa14.5□□□□□ -0.09
NPHP4-208ENST00000478423 PCDHA2Q9Y5H9 948 aa14.5□□□□□ -0.09
NPHP4-208ENST00000478423 CNTNAP1P78357 1384 aa14.5□□□□□ -0.09
NPHP4-208ENST00000478423 MBTD1Q05BQ5 628 aa14.5□□□□□ -0.09
NPHP4-208ENST00000478423 AASDHQ4L235 1098 aaPredicted RBP14.5□□□□□ -0.09
NPHP4-208ENST00000478423 APOBEC3GQ9HC16 384 aaKnown RBP14.5□□□□□ -0.09
NPHP4-208ENST00000478423 TAS2R13Q9NYV9 303 aa14.5□□□□□ -0.09
NPHP4-208ENST00000478423 SOX13Q9UN79 622 aa14.5□□□□□ -0.09
NPHP4-208ENST00000478423 FCHO1O14526 889 aa14.5□□□□□ -0.09
NPHP4-208ENST00000478423 BUD23O43709 281 aaKnown RBP14.5□□□□□ -0.09
NPHP4-208ENST00000478423 DUSP11O75319 330 aaKnown RBP14.5□□□□□ -0.09
NPHP4-208ENST00000478423 AMHP03971 560 aa14.5□□□□□ -0.09
NPHP4-208ENST00000478423 CCNB1P14635 433 aa14.5□□□□□ -0.09
NPHP4-208ENST00000478423 INPP1P49441 399 aa14.5□□□□□ -0.09
NPHP4-208ENST00000478423 PRKAA1Q13131 559 aa14.5□□□□□ -0.09
NPHP4-208ENST00000478423 CCDC153Q494R4 210 aa14.5□□□□□ -0.09
NPHP4-208ENST00000478423 HECTD3Q5T447 861 aa14.5□□□□□ -0.09
NPHP4-208ENST00000478423 UNC5AQ6ZN44 842 aa14.5□□□□□ -0.09
NPHP4-208ENST00000478423 MON1BQ7L1V2 547 aa14.5□□□□□ -0.09
NPHP4-208ENST00000478423 CRYL1Q9Y2S2 319 aa14.5□□□□□ -0.09
NPHP4-208ENST00000478423 COQ4Q9Y3A0 265 aa14.5□□□□□ -0.09
NPHP4-208ENST00000478423 ROBO1Q9Y6N7 1651 aa14.5□□□□□ -0.09
NPHP4-208ENST00000478423 CKBP12277 381 aa14.49□□□□□ -0.09
NPHP4-208ENST00000478423 SERPINH1P50454 418 aaKnown RBP14.49□□□□□ -0.09
NPHP4-208ENST00000478423 PKN3Q6P5Z2 889 aa14.49□□□□□ -0.09
NPHP4-208ENST00000478423 FOXR1Q6PIV2 292 aa14.49□□□□□ -0.09
NPHP4-208ENST00000478423 TFAP2BQ92481 460 aa14.49□□□□□ -0.09
NPHP4-208ENST00000478423 NMRAL1Q9HBL8 299 aa14.49□□□□□ -0.09
NPHP4-208ENST00000478423 SIX2Q9NPC8 291 aa14.49□□□□□ -0.09
NPHP4-208ENST00000478423 UXTQ9UBK9 157 aaPredicted RBP14.49□□□□□ -0.09
NPHP4-208ENST00000478423 NOCTQ9UK39 431 aaKnown RBP14.49□□□□□ -0.09
NPHP4-208ENST00000478423 ZNF536O15090 1300 aa14.49□□□□□ -0.09
NPHP4-208ENST00000478423 ASGR1P07306 291 aa14.49□□□□□ -0.09
NPHP4-208ENST00000478423 SERPINB3P29508 390 aa14.49□□□□□ -0.09
NPHP4-208ENST00000478423 SLC10A6Q3KNW5 377 aa14.49□□□□□ -0.09
NPHP4-208ENST00000478423 PABPC1LQ4VXU2 614 aaKnown RBP14.49□□□□□ -0.09
NPHP4-208ENST00000478423 CAPRIN2Q6IMN6 1127 aaKnown RBP14.49□□□□□ -0.09
NPHP4-208ENST00000478423 GLT6D1Q7Z4J2 308 aa14.49□□□□□ -0.09
NPHP4-208ENST00000478423 SCUBE1Q8IWY4 988 aa14.49□□□□□ -0.09
NPHP4-208ENST00000478423 CEP70Q8NHQ1 597 aa14.49□□□□□ -0.09
NPHP4-208ENST00000478423 TRIM45Q9H8W5 580 aaPredicted RBP14.49□□□□□ -0.09
NPHP4-208ENST00000478423 FAM32AQ9Y421 112 aaKnown RBP14.49□□□□□ -0.09
NPHP4-208ENST00000478423 C5orf58C9J3I9 102 aa14.49□□□□□ -0.09
NPHP4-208ENST00000478423 CRABP2P29373 138 aa14.49□□□□□ -0.09
NPHP4-208ENST00000478423 SLC25A52Q3SY17 297 aa14.49□□□□□ -0.09
NPHP4-208ENST00000478423 OTOAQ7RTW8 1153 aa14.49□□□□□ -0.09
NPHP4-208ENST00000478423 CERS2Q96G23 380 aa14.49□□□□□ -0.09
NPHP4-208ENST00000478423 ZNF558Q96NG5 402 aa14.49□□□□□ -0.09
NPHP4-208ENST00000478423 PRPF18Q99633 342 aaKnown RBP14.49□□□□□ -0.09
NPHP4-208ENST00000478423 ACTR8Q9H981 624 aa14.49□□□□□ -0.09
NPHP4-208ENST00000478423 CDHR5Q9HBB8 845 aa14.49□□□□□ -0.09
NPHP4-208ENST00000478423 DPP7Q9UHL4 492 aa14.49□□□□□ -0.09
NPHP4-208ENST00000478423 ZSCAN9O15535 394 aaPredicted RBP14.49□□□□□ -0.09
NPHP4-208ENST00000478423 PTPN4P29074 926 aa14.49□□□□□ -0.09
NPHP4-208ENST00000478423 ADRA1BP35368 520 aa14.49□□□□□ -0.09
NPHP4-208ENST00000478423 CYLC2Q14093 348 aaPredicted RBP14.49□□□□□ -0.09
NPHP4-208ENST00000478423 AGKQ53H12 422 aa14.49□□□□□ -0.09
NPHP4-208ENST00000478423 XYLT1Q86Y38 959 aa14.49□□□□□ -0.09
NPHP4-208ENST00000478423 SLC22A9Q8IVM8 553 aa14.49□□□□□ -0.09
NPHP4-208ENST00000478423 CNDP1Q96KN2 507 aa14.49□□□□□ -0.09
NPHP4-208ENST00000478423 C17orf80Q9BSJ5 609 aa14.49□□□□□ -0.09
NPHP4-208ENST00000478423 TAGLN3Q9UI15 199 aa14.49□□□□□ -0.09
NPHP4-208ENST00000478423 EIF3LQ9Y262 564 aaKnown RBP14.49□□□□□ -0.09
NPHP4-208ENST00000478423 PFDN1O60925 122 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms