RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 CDK18Q07002 472 aa4.37□□□□□ -1.71
SMARCA1-204ENST00000478420 RALBP1Q15311 655 aa4.37□□□□□ -1.71
SMARCA1-204ENST00000478420 KIAA1324Q6UXG2 1013 aaKnown RBP4.37□□□□□ -1.71
SMARCA1-204ENST00000478420 SYNE3Q6ZMZ3 975 aa4.37□□□□□ -1.71
SMARCA1-204ENST00000478420 FAM57BQ71RH2 274 aa4.37□□□□□ -1.71
SMARCA1-204ENST00000478420 ANKRD18AQ8IVF6 992 aa4.37□□□□□ -1.71
SMARCA1-204ENST00000478420 SUGP1Q8IWZ8 645 aaKnown RBP4.37□□□□□ -1.71
SMARCA1-204ENST00000478420 ADGRF4Q8IZF3 695 aa4.37□□□□□ -1.71
SMARCA1-204ENST00000478420 TMEM57Q8N5G2 664 aa4.37□□□□□ -1.71
SMARCA1-204ENST00000478420 PTGR2Q8N8N7 351 aaPredicted RBP4.37□□□□□ -1.71
SMARCA1-204ENST00000478420 OR52N4Q8NGI2 321 aa4.37□□□□□ -1.71
SMARCA1-204ENST00000478420 ATP2A3Q93084 1043 aa4.37□□□□□ -1.71
SMARCA1-204ENST00000478420 SCNM1Q9BWG6 230 aa4.37□□□□□ -1.71
SMARCA1-204ENST00000478420 CHODLQ9H9P2 273 aa4.37□□□□□ -1.71
SMARCA1-204ENST00000478420 MOV10Q9HCE1 1003 aaKnown RBP4.37□□□□□ -1.71
SMARCA1-204ENST00000478420 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.37□□□□□ -1.71
SMARCA1-204ENST00000478420 MTMR4Q9NYA4 1195 aa4.37□□□□□ -1.71
SMARCA1-204ENST00000478420 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.37□□□□□ -1.71
SMARCA1-204ENST00000478420 FEM1BQ9UK73 627 aa4.37□□□□□ -1.71
SMARCA1-204ENST00000478420 GPR52Q9Y2T5 361 aa4.37□□□□□ -1.71
SMARCA1-204ENST00000478420 B9A039 149 aa4.36□□□□□ -1.71
SMARCA1-204ENST00000478420 MCIDASD6RGH6 385 aa4.36□□□□□ -1.71
SMARCA1-204ENST00000478420 CTSAP10619 480 aa4.36□□□□□ -1.71
SMARCA1-204ENST00000478420 HSD3B1P14060 373 aa4.36□□□□□ -1.71
SMARCA1-204ENST00000478420 CHN1P15882 459 aa4.36□□□□□ -1.71
SMARCA1-204ENST00000478420 RXRAP19793 462 aa4.36□□□□□ -1.71
SMARCA1-204ENST00000478420 MMP13P45452 471 aa4.36□□□□□ -1.71
SMARCA1-204ENST00000478420 PAPOLAP51003 745 aaKnown RBP4.36□□□□□ -1.71
SMARCA1-204ENST00000478420 ADPRHP54922 357 aa4.36□□□□□ -1.71
SMARCA1-204ENST00000478420 SSBP2P81877 361 aaPredicted RBP4.36□□□□□ -1.71
SMARCA1-204ENST00000478420 BIRC3Q13489 604 aa4.36□□□□□ -1.71
SMARCA1-204ENST00000478420 ALKBH1Q13686 389 aaKnown RBP4.36□□□□□ -1.71
SMARCA1-204ENST00000478420 LRRC24Q50LG9 513 aa4.36□□□□□ -1.71
SMARCA1-204ENST00000478420 FBXO47Q5MNV8 452 aa4.36□□□□□ -1.71
SMARCA1-204ENST00000478420 C10orf76Q5T2E6 689 aa4.36□□□□□ -1.71
SMARCA1-204ENST00000478420 ZNF793Q6ZN11 406 aa4.36□□□□□ -1.71
SMARCA1-204ENST00000478420 DEF8Q6ZN54 512 aa4.36□□□□□ -1.71
SMARCA1-204ENST00000478420 RASGRP2Q7LDG7 609 aa4.36□□□□□ -1.71
SMARCA1-204ENST00000478420 ZNF354CQ86Y25 554 aa4.36□□□□□ -1.71
SMARCA1-204ENST00000478420 C2CD5Q86YS7 1000 aa4.36□□□□□ -1.71
SMARCA1-204ENST00000478420 PAQR4Q8N4S7 273 aaPredicted RBP4.36□□□□□ -1.71
SMARCA1-204ENST00000478420 ARL14EPQ8N8R7 260 aaPredicted RBP4.36□□□□□ -1.71
SMARCA1-204ENST00000478420 MYRIPQ8NFW9 859 aa4.36□□□□□ -1.71
SMARCA1-204ENST00000478420 RILPL2Q969X0 211 aa4.36□□□□□ -1.71
SMARCA1-204ENST00000478420 ZSCAN31Q96LW9 406 aaPredicted RBP4.36□□□□□ -1.71
SMARCA1-204ENST00000478420 ADAD1Q96M93 576 aaKnown RBP4.36□□□□□ -1.71
SMARCA1-204ENST00000478420 PYM1Q9BRP8 204 aaKnown RBP4.36□□□□□ -1.71
SMARCA1-204ENST00000478420 UBA5Q9GZZ9 404 aa4.36□□□□□ -1.71
SMARCA1-204ENST00000478420 PLEKHA2Q9HB19 425 aa4.36□□□□□ -1.71
SMARCA1-204ENST00000478420 SLC25A13Q9UJS0 675 aa4.36□□□□□ -1.71
SMARCA1-204ENST00000478420 RCE1Q9Y256 329 aa4.36□□□□□ -1.71
SMARCA1-204ENST00000478420 TNFSF13BQ9Y275 285 aa4.36□□□□□ -1.71
SMARCA1-204ENST00000478420 BTBD3Q9Y2F9 522 aa4.36□□□□□ -1.71
SMARCA1-204ENST00000478420 DERAQ9Y315 318 aa4.36□□□□□ -1.71
SMARCA1-204ENST00000478420 DGKBQ9Y6T7 804 aa4.36□□□□□ -1.71
SMARCA1-204ENST00000478420 WDR91A4D1P6 747 aa4.35□□□□□ -1.71
SMARCA1-204ENST00000478420 DPPA5A6NC42 116 aa4.35□□□□□ -1.71
SMARCA1-204ENST00000478420 F8W810 466 aa4.35□□□□□ -1.71
SMARCA1-204ENST00000478420 NFATC1O95644 943 aa4.35□□□□□ -1.71
SMARCA1-204ENST00000478420 CENPBP07199 599 aaPredicted RBP4.35□□□□□ -1.71
SMARCA1-204ENST00000478420 HOXB9P17482 250 aaPredicted RBP4.35□□□□□ -1.71
SMARCA1-204ENST00000478420 OAZ1P54368 228 aa4.35□□□□□ -1.71
SMARCA1-204ENST00000478420 Q4G0T1 1027 aa4.35□□□□□ -1.71
SMARCA1-204ENST00000478420 HSP90AB4PQ58FF6 505 aa4.35□□□□□ -1.71
SMARCA1-204ENST00000478420 PAPD7Q5XG87 772 aaKnown RBP4.35□□□□□ -1.71
SMARCA1-204ENST00000478420 LRIG3Q6UXM1 1119 aa4.35□□□□□ -1.71
SMARCA1-204ENST00000478420 MDGA2Q7Z553 956 aa4.35□□□□□ -1.71
SMARCA1-204ENST00000478420 ANKS1BQ7Z6G8 1248 aa4.35□□□□□ -1.71
SMARCA1-204ENST00000478420 TMEM200AQ86VY9 491 aa4.35□□□□□ -1.71
SMARCA1-204ENST00000478420 ANKRD13BQ86YJ7 626 aa4.35□□□□□ -1.71
SMARCA1-204ENST00000478420 CPXCR1Q8N123 301 aa4.35□□□□□ -1.71
SMARCA1-204ENST00000478420 EXD3Q8N9H8 876 aa4.35□□□□□ -1.71
SMARCA1-204ENST00000478420 CEP70Q8NHQ1 597 aa4.35□□□□□ -1.71
SMARCA1-204ENST00000478420 DENND1AQ8TEH3 1009 aa4.35□□□□□ -1.71
SMARCA1-204ENST00000478420 KCNJ9Q92806 393 aa4.35□□□□□ -1.71
SMARCA1-204ENST00000478420 GCC1Q96CN9 775 aa4.35□□□□□ -1.71
SMARCA1-204ENST00000478420 KTI12Q96EK9 354 aaPredicted RBP4.35□□□□□ -1.71
SMARCA1-204ENST00000478420 TUBB6Q9BUF5 446 aa4.35□□□□□ -1.71
SMARCA1-204ENST00000478420 TRIM31Q9BZY9 425 aa4.35□□□□□ -1.71
SMARCA1-204ENST00000478420 ARHGAP39Q9C0H5 1083 aa4.35□□□□□ -1.71
SMARCA1-204ENST00000478420 CLPBQ9H078 707 aa4.35□□□□□ -1.71
SMARCA1-204ENST00000478420 TXNRD2Q9NNW7 524 aa4.35□□□□□ -1.71
SMARCA1-204ENST00000478420 PAPOLBQ9NRJ5 636 aaKnown RBP4.35□□□□□ -1.71
SMARCA1-204ENST00000478420 RASSF1Q9NS23 344 aa4.35□□□□□ -1.71
SMARCA1-204ENST00000478420 TMEM184CQ9NVA4 438 aa4.35□□□□□ -1.71
SMARCA1-204ENST00000478420 TMEM45AQ9NWC5 275 aa4.35□□□□□ -1.71
SMARCA1-204ENST00000478420 LUZP4Q9P127 313 aa4.35□□□□□ -1.71
SMARCA1-204ENST00000478420 RRP7AQ9Y3A4 280 aaKnown RBP4.35□□□□□ -1.71
SMARCA1-204ENST00000478420 DNAJC9-AS1A6NH13 148 aa4.34□□□□□ -1.71
SMARCA1-204ENST00000478420 ADAM10O14672 748 aa4.34□□□□□ -1.71
SMARCA1-204ENST00000478420 CCNT1O60563 726 aaKnown RBP4.34□□□□□ -1.71
SMARCA1-204ENST00000478420 TLR2O60603 784 aa4.34□□□□□ -1.71
SMARCA1-204ENST00000478420 UGDHO60701 494 aa4.34□□□□□ -1.71
SMARCA1-204ENST00000478420 PAX3P23760 479 aa4.34□□□□□ -1.71
SMARCA1-204ENST00000478420 PRPH2P23942 346 aa4.34□□□□□ -1.71
SMARCA1-204ENST00000478420 HOXD9P28356 352 aaPredicted RBP4.34□□□□□ -1.71
SMARCA1-204ENST00000478420 PNPLA4P41247 253 aa4.34□□□□□ -1.71
SMARCA1-204ENST00000478420 RAPGEF1Q13905 1077 aa4.34□□□□□ -1.71
SMARCA1-204ENST00000478420 EFR3AQ14156 821 aa4.34□□□□□ -1.71
SMARCA1-204ENST00000478420 GALNT3Q14435 633 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms