RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 LRRC31Q6UY01 552 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 CHST9Q7L1S5 443 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 TFAP2DQ7Z6R9 452 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 SLFN11Q7Z7L1 901 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 ADIPOR2Q86V24 386 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 FAM72BQ86X60 149 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 ZNF683Q8IZ20 524 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 CHPFQ8IZ52 775 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 AHI1Q8N157 1196 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 PYROXD2Q8N2H3 581 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 ARFGAP1Q8N6T3 406 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 CCDC26Q8TAB7 109 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 FIBINQ8TAL6 211 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 CYB5D2Q8WUJ1 264 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 CTNNBL1Q8WYA6 563 aaPredicted RBP10.59□□□□□ -0.71
HDAC6-222ENST00000478095 HAPLN3Q96S86 360 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 IRX2Q9BZI1 471 aaPredicted RBP10.59□□□□□ -0.71
HDAC6-222ENST00000478095 GPATCH2LQ9NWQ4 482 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 ELOVL2Q9NXB9 296 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 CACNA2D2Q9NY47 1150 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 CTTNBP2NLQ9P2B4 639 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 PCSK1NQ9UHG2 260 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 ANAPC7Q9UJX3 599 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 MMP17Q9ULZ9 603 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 RAD54BQ9Y620 910 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 KMT2EQ8IZD2 1858 aa10.59□□□□□ -0.71
HDAC6-222ENST00000478095 SOWAHDA6NJG2 315 aa10.58□□□□□ -0.72
HDAC6-222ENST00000478095 K7ESF4 209 aa10.58□□□□□ -0.72
HDAC6-222ENST00000478095 MAP3K7O43318 606 aa10.58□□□□□ -0.72
HDAC6-222ENST00000478095 LRCH4O75427 683 aa10.58□□□□□ -0.72
HDAC6-222ENST00000478095 H2AFZP0C0S5 128 aa10.58□□□□□ -0.72
HDAC6-222ENST00000478095 TDGF1P13385 188 aa10.58□□□□□ -0.72
HDAC6-222ENST00000478095 MZF1P28698 734 aaPredicted RBP10.58□□□□□ -0.72
HDAC6-222ENST00000478095 CSKP41240 450 aa10.58□□□□□ -0.72
HDAC6-222ENST00000478095 CRY1Q16526 586 aa10.58□□□□□ -0.72
HDAC6-222ENST00000478095 EFHC2Q5JST6 749 aa10.58□□□□□ -0.72
HDAC6-222ENST00000478095 ARTNQ5T4W7 220 aa10.58□□□□□ -0.72
HDAC6-222ENST00000478095 MBLAC2Q68D91 279 aa10.58□□□□□ -0.72
HDAC6-222ENST00000478095 CXorf57Q6NSI4 855 aaKnown RBP10.58□□□□□ -0.72
HDAC6-222ENST00000478095 RWDD4Q6NW29 188 aaKnown RBP10.58□□□□□ -0.72
HDAC6-222ENST00000478095 H2AFVQ71UI9 128 aa10.58□□□□□ -0.72
HDAC6-222ENST00000478095 SYT13Q7L8C5 426 aa10.58□□□□□ -0.72
HDAC6-222ENST00000478095 APCDD1Q8J025 514 aa10.58□□□□□ -0.72
HDAC6-222ENST00000478095 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.58□□□□□ -0.72
HDAC6-222ENST00000478095 OR52K2Q8NGK3 314 aa10.58□□□□□ -0.72
HDAC6-222ENST00000478095 ZNF564Q8TBZ8 553 aaPredicted RBP10.58□□□□□ -0.72
HDAC6-222ENST00000478095 WFIKKN2Q8TEU8 576 aa10.58□□□□□ -0.72
HDAC6-222ENST00000478095 FNIP1Q8TF40 1166 aa10.58□□□□□ -0.72
HDAC6-222ENST00000478095 ATOH1Q92858 354 aaPredicted RBP10.58□□□□□ -0.72
HDAC6-222ENST00000478095 NTAN1Q96AB6 310 aa10.58□□□□□ -0.72
HDAC6-222ENST00000478095 LMLNQ96KR4 655 aa10.58□□□□□ -0.72
HDAC6-222ENST00000478095 C1orf74Q96LT6 269 aa10.58□□□□□ -0.72
HDAC6-222ENST00000478095 PANX2Q96RD6 677 aa10.58□□□□□ -0.72
HDAC6-222ENST00000478095 PEBP4Q96S96 227 aa10.58□□□□□ -0.72
HDAC6-222ENST00000478095 KCNH6Q9H252 994 aa10.58□□□□□ -0.72
HDAC6-222ENST00000478095 TMEM51Q9NW97 253 aa10.58□□□□□ -0.72
HDAC6-222ENST00000478095 OR12D3Q9UGF7 316 aa10.58□□□□□ -0.72
HDAC6-222ENST00000478095 FBXO4Q9UKT5 387 aa10.58□□□□□ -0.72
HDAC6-222ENST00000478095 INTS6Q9UL03 887 aaKnown RBP10.58□□□□□ -0.72
HDAC6-222ENST00000478095 FZD10Q9ULW2 581 aa10.58□□□□□ -0.72
HDAC6-222ENST00000478095 VPS9D1Q9Y2B5 631 aa10.58□□□□□ -0.72
HDAC6-222ENST00000478095 STARD13Q9Y3M8 1113 aa10.58□□□□□ -0.72
HDAC6-222ENST00000478095 R4GN57 208 aa10.58□□□□□ -0.72
HDAC6-222ENST00000478095 ZNF318Q5VUA4 2279 aa10.58□□□□□ -0.72
HDAC6-222ENST00000478095 WDFY4Q6ZS81 3184 aa10.57□□□□□ -0.72
HDAC6-222ENST00000478095 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.57□□□□□ -0.72
HDAC6-222ENST00000478095 TCRBV21S2A2A0A5A6 115 aa10.57□□□□□ -0.72
HDAC6-222ENST00000478095 DRGXA6NNA5 263 aa10.57□□□□□ -0.72
HDAC6-222ENST00000478095 TMEM110-MUSTN1A8MSY1 372 aa10.57□□□□□ -0.72
HDAC6-222ENST00000478095 CREB3O43889 395 aa10.57□□□□□ -0.72
HDAC6-222ENST00000478095 CLDN11O75508 207 aa10.57□□□□□ -0.72
HDAC6-222ENST00000478095 RNF8O76064 485 aa10.57□□□□□ -0.72
HDAC6-222ENST00000478095 LRIG2O94898 1065 aa10.57□□□□□ -0.72
HDAC6-222ENST00000478095 TMEM253P0C7T8 217 aa10.57□□□□□ -0.72
HDAC6-222ENST00000478095 HOXB2P14652 356 aa10.57□□□□□ -0.72
HDAC6-222ENST00000478095 TCF4P15884 667 aa10.57□□□□□ -0.72
HDAC6-222ENST00000478095 POLR2EP19388 210 aaKnown RBP10.57□□□□□ -0.72
HDAC6-222ENST00000478095 MIPP30301 263 aa10.57□□□□□ -0.72
HDAC6-222ENST00000478095 NTSR1P30989 418 aa10.57□□□□□ -0.72
HDAC6-222ENST00000478095 IL12RB1P42701 662 aa10.57□□□□□ -0.72
HDAC6-222ENST00000478095 CTSOP43234 321 aaPredicted RBP10.57□□□□□ -0.72
HDAC6-222ENST00000478095 FNTBP49356 437 aa10.57□□□□□ -0.72
HDAC6-222ENST00000478095 CDH4P55283 916 aa10.57□□□□□ -0.72
HDAC6-222ENST00000478095 SCAPQ12770 1279 aa10.57□□□□□ -0.72
HDAC6-222ENST00000478095 ZNF177Q13360 481 aaPredicted RBP10.57□□□□□ -0.72
HDAC6-222ENST00000478095 ZNF234Q14588 700 aa10.57□□□□□ -0.72
HDAC6-222ENST00000478095 EIF4HQ15056 248 aaKnown RBP10.57□□□□□ -0.72
HDAC6-222ENST00000478095 CA9Q16790 459 aa10.57□□□□□ -0.72
HDAC6-222ENST00000478095 C5orf22Q49AR2 442 aa10.57□□□□□ -0.72
HDAC6-222ENST00000478095 FNDC3BQ53EP0 1204 aaKnown RBP10.57□□□□□ -0.72
HDAC6-222ENST00000478095 PITRM1Q5JRX3 1037 aa10.57□□□□□ -0.72
HDAC6-222ENST00000478095 EOGTQ5NDL2 527 aa10.57□□□□□ -0.72
HDAC6-222ENST00000478095 MANEALQ5VSG8 457 aa10.57□□□□□ -0.72
HDAC6-222ENST00000478095 ANO7Q6IWH7 933 aa10.57□□□□□ -0.72
HDAC6-222ENST00000478095 KIAA1211LQ6NV74 962 aa10.57□□□□□ -0.72
HDAC6-222ENST00000478095 TRMT11Q7Z4G4 463 aaKnown RBP10.57□□□□□ -0.72
HDAC6-222ENST00000478095 KIAA0907Q7Z7F0 614 aaPredicted RBP10.57□□□□□ -0.72
HDAC6-222ENST00000478095 CPNE8Q86YQ8 564 aa10.57□□□□□ -0.72
HDAC6-222ENST00000478095 ZNF366Q8N895 744 aa10.57□□□□□ -0.72
HDAC6-222ENST00000478095 ZNF557Q8N988 423 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms