RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 ASIC2Q16515 512 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 MOGQ16653 247 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 SMUG1Q53HV7 270 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 TAF1BQ53T94 588 aaPredicted RBP4.87□□□□□ -1.63
PTCD3-212ENST00000477520 CRB2Q5IJ48 1285 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 TTC38Q5R3I4 469 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 C6orf10Q5SRN2 563 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 PPP4R4Q6NUP7 873 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 ZFP1Q6P2D0 407 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 UGT2A3Q6UWM9 527 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 DCDC5Q6ZRR9 648 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 H2AFVQ71UI9 128 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 MAEAQ7L5Y9 396 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 NLRC3Q7RTR2 1065 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 KRT26Q7Z3Y9 468 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 ZNF804AQ7Z570 1209 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 UBE2Q1Q7Z7E8 422 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 DHDDSQ86SQ9 333 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 SATL1Q86VE3 508 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 ZNF354CQ86Y25 554 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 MMAAQ8IVH4 418 aaKnown RBP4.87□□□□□ -1.63
PTCD3-212ENST00000477520 WDR75Q8IWA0 830 aaKnown RBP4.87□□□□□ -1.63
PTCD3-212ENST00000477520 CCDC105Q8IYK2 499 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 SCYL3Q8IZE3 742 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 GUF1Q8N442 669 aaKnown RBP4.87□□□□□ -1.63
PTCD3-212ENST00000477520 ESX1Q8N693 406 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 UBL4BQ8N7F7 174 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 ATP6V0D2Q8N8Y2 350 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 FAM133AQ8N9E0 248 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 ADCY4Q8NFM4 1077 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 HM13Q8TCT9 377 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 GIPC2Q8TF65 315 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 GRK7Q8WTQ7 553 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 TRUB1Q8WWH5 349 aaKnown RBP4.87□□□□□ -1.63
PTCD3-212ENST00000477520 PRPF31Q8WWY3 499 aaKnown RBP4.87□□□□□ -1.63
PTCD3-212ENST00000477520 APBB2Q92870 758 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 CELF1Q92879 486 aaKnown RBP4.87□□□□□ -1.63
PTCD3-212ENST00000477520 DVL3Q92997 716 aaPredicted RBP4.87□□□□□ -1.63
PTCD3-212ENST00000477520 RMDN1Q96DB5 314 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 PTCD3Q96EY7 689 aaKnown RBP4.87□□□□□ -1.63
PTCD3-212ENST00000477520 FAM161BQ96MY7 647 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 SLC6A18Q96N87 628 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 YME1L1Q96TA2 773 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 EYA3Q99504 573 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 C7orf25Q9BPX7 421 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 NEURL2Q9BR09 285 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 GPATCH1Q9BRR8 931 aaKnown RBP4.87□□□□□ -1.63
PTCD3-212ENST00000477520 SLC39A3Q9BRY0 314 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 PHF20Q9BVI0 1012 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 SLC26A6Q9BXS9 759 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 CCDC113Q9H0I3 377 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 NEUROG2Q9H2A3 272 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 STN1Q9H668 368 aaKnown RBP4.87□□□□□ -1.63
PTCD3-212ENST00000477520 RPAP3Q9H6T3 665 aaPredicted RBP4.87□□□□□ -1.63
PTCD3-212ENST00000477520 MMRN2Q9H8L6 949 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 C12orf10Q9HB07 376 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 ZNF287Q9HBT7 754 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 CNGB3Q9NQW8 809 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 KBTBD4Q9NVX7 518 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 SELENONQ9NZV5 590 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 TMEM9Q9P0T7 183 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 NTMQ9P121 344 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 VPS54Q9P1Q0 977 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 ARMCX3Q9UH62 379 aaPredicted RBP4.87□□□□□ -1.63
PTCD3-212ENST00000477520 DBNLQ9UJU6 430 aaKnown RBP4.87□□□□□ -1.63
PTCD3-212ENST00000477520 PA2G4Q9UQ80 394 aaKnown RBP4.87□□□□□ -1.63
PTCD3-212ENST00000477520 LZTS1Q9Y250 596 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 AP4S1Q9Y587 144 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 PCDHB6Q9Y5E3 794 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 N6AMT1Q9Y5N5 214 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 SLX4Q8IY92 1834 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 PFASO15067 1338 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 MAST3O60307 1309 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 TAF1P21675 1872 aa4.87□□□□□ -1.63
PTCD3-212ENST00000477520 CACNA1SQ13698 1873 aa4.86□□□□□ -1.63
PTCD3-212ENST00000477520 CHD4Q14839 1912 aa4.86□□□□□ -1.63
PTCD3-212ENST00000477520 hCG_2014768A0A024R1R8 64 aa4.86□□□□□ -1.63
PTCD3-212ENST00000477520 GOLGA8QA0A0J9YX86 632 aa4.86□□□□□ -1.63
PTCD3-212ENST00000477520 A0A1W2PRG0 241 aa4.86□□□□□ -1.63
PTCD3-212ENST00000477520 GOLGA8OA6NCC3 632 aa4.86□□□□□ -1.63
PTCD3-212ENST00000477520 ZNF839A8K0R7 811 aa4.86□□□□□ -1.63
PTCD3-212ENST00000477520 GOLGA8NF8WBI6 632 aa4.86□□□□□ -1.63
PTCD3-212ENST00000477520 H0YC42 278 aa4.86□□□□□ -1.63
PTCD3-212ENST00000477520 GOLGA8RI6L899 631 aa4.86□□□□□ -1.63
PTCD3-212ENST00000477520 CYR61O00622 381 aa4.86□□□□□ -1.63
PTCD3-212ENST00000477520 SHOXO15266 292 aa4.86□□□□□ -1.63
PTCD3-212ENST00000477520 FGF10O15520 208 aaPredicted RBP4.86□□□□□ -1.63
PTCD3-212ENST00000477520 ADCY6O43306 1168 aa4.86□□□□□ -1.63
PTCD3-212ENST00000477520 BUD23O43709 281 aaKnown RBP4.86□□□□□ -1.63
PTCD3-212ENST00000477520 EXOC3O60645 756 aa4.86□□□□□ -1.63
PTCD3-212ENST00000477520 RNASEH1O60930 286 aaKnown RBP4.86□□□□□ -1.63
PTCD3-212ENST00000477520 UFL1O94874 794 aa4.86□□□□□ -1.63
PTCD3-212ENST00000477520 PDE8BO95263 885 aa4.86□□□□□ -1.63
PTCD3-212ENST00000477520 FKBP9O95302 570 aa4.86□□□□□ -1.63
PTCD3-212ENST00000477520 FTCDO95954 541 aa4.86□□□□□ -1.63
PTCD3-212ENST00000477520 FGAP02671 866 aa4.86□□□□□ -1.63
PTCD3-212ENST00000477520 GSNP06396 782 aa4.86□□□□□ -1.63
PTCD3-212ENST00000477520 CD48P09326 243 aa4.86□□□□□ -1.63
PTCD3-212ENST00000477520 FAM58BPP0C7Q3 252 aa4.86□□□□□ -1.63
PTCD3-212ENST00000477520 ZBTB48P10074 688 aaPredicted RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms