RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 STIM2Q9P246 746 aa10.15□□□□□ -0.78
COL4A5-204ENST00000477429 CGNQ9P2M7 1197 aaKnown RBP10.15□□□□□ -0.78
COL4A5-204ENST00000477429 SERTAD1Q9UHV2 236 aa10.15□□□□□ -0.78
COL4A5-204ENST00000477429 XPO7Q9UIA9 1087 aaKnown RBP10.15□□□□□ -0.78
COL4A5-204ENST00000477429 NAV3Q8IVL0 2385 aa10.15□□□□□ -0.79
COL4A5-204ENST00000477429 DOCK9Q9BZ29 2069 aa10.14□□□□□ -0.79
COL4A5-204ENST00000477429 CENPEQ02224 2701 aa10.14□□□□□ -0.79
COL4A5-204ENST00000477429 LY6G6EA0A0G2JKS1 128 aa10.14□□□□□ -0.79
COL4A5-204ENST00000477429 PVALEFA0A1B0GWK0 134 aa10.14□□□□□ -0.79
COL4A5-204ENST00000477429 B8ZZF3 427 aa10.14□□□□□ -0.79
COL4A5-204ENST00000477429 TLR4O00206 839 aa10.14□□□□□ -0.79
COL4A5-204ENST00000477429 RNF103O00237 685 aa10.14□□□□□ -0.79
COL4A5-204ENST00000477429 CAPN9O14815 690 aa10.14□□□□□ -0.79
COL4A5-204ENST00000477429 RRP8O43159 456 aaKnown RBP10.14□□□□□ -0.79
COL4A5-204ENST00000477429 SIGLEC6O43699 453 aa10.14□□□□□ -0.79
COL4A5-204ENST00000477429 ACTN4O43707 911 aaKnown RBP10.14□□□□□ -0.79
COL4A5-204ENST00000477429 MT-CO3P00414 261 aa10.14□□□□□ -0.79
COL4A5-204ENST00000477429 IGLV3-27P01718 113 aa10.14□□□□□ -0.79
COL4A5-204ENST00000477429 C1SP09871 688 aa10.14□□□□□ -0.79
COL4A5-204ENST00000477429 PDIA4P13667 645 aaKnown RBP10.14□□□□□ -0.79
COL4A5-204ENST00000477429 SLC8A1P32418 973 aa10.14□□□□□ -0.79
COL4A5-204ENST00000477429 PSMD8P48556 350 aa10.14□□□□□ -0.79
COL4A5-204ENST00000477429 STK19P49842 368 aaPredicted RBP10.14□□□□□ -0.79
COL4A5-204ENST00000477429 ADPRHP54922 357 aa10.14□□□□□ -0.79
COL4A5-204ENST00000477429 ADIGQ0VDE8 80 aa10.14□□□□□ -0.79
COL4A5-204ENST00000477429 GOLGA7BQ2TAP0 167 aa10.14□□□□□ -0.79
COL4A5-204ENST00000477429 ADGRF1Q5T601 910 aa10.14□□□□□ -0.79
COL4A5-204ENST00000477429 ARHGAP17Q68EM7 881 aa10.14□□□□□ -0.79
COL4A5-204ENST00000477429 USP30Q70CQ3 517 aa10.14□□□□□ -0.79
COL4A5-204ENST00000477429 TADA2BQ86TJ2 420 aa10.14□□□□□ -0.79
COL4A5-204ENST00000477429 APCDD1Q8J025 514 aa10.14□□□□□ -0.79
COL4A5-204ENST00000477429 CFAP52Q8N1V2 620 aa10.14□□□□□ -0.79
COL4A5-204ENST00000477429 STK40Q8N2I9 435 aa10.14□□□□□ -0.79
COL4A5-204ENST00000477429 OR2T34Q8NGX1 318 aa10.14□□□□□ -0.79
COL4A5-204ENST00000477429 RFFLQ8WZ73 363 aa10.14□□□□□ -0.79
COL4A5-204ENST00000477429 EEF2KMTQ96G04 330 aa10.14□□□□□ -0.79
COL4A5-204ENST00000477429 SERAC1Q96JX3 654 aa10.14□□□□□ -0.79
COL4A5-204ENST00000477429 ZSWIM1Q9BR11 485 aa10.14□□□□□ -0.79
COL4A5-204ENST00000477429 UBXN6Q9BZV1 441 aa10.14□□□□□ -0.79
COL4A5-204ENST00000477429 LRRC27Q9C0I9 530 aa10.14□□□□□ -0.79
COL4A5-204ENST00000477429 CYP3A43Q9HB55 503 aa10.14□□□□□ -0.79
COL4A5-204ENST00000477429 CISHQ9NSE2 258 aa10.14□□□□□ -0.79
COL4A5-204ENST00000477429 ADAMTS1Q9UHI8 967 aa10.14□□□□□ -0.79
COL4A5-204ENST00000477429 SARDHQ9UL12 918 aa10.14□□□□□ -0.79
COL4A5-204ENST00000477429 STRIP2Q9ULQ0 834 aa10.14□□□□□ -0.79
COL4A5-204ENST00000477429 U3KQA8 63 aa10.14□□□□□ -0.79
COL4A5-204ENST00000477429 COL27A1Q8IZC6 1860 aaPredicted RBP10.13□□□□□ -0.79
COL4A5-204ENST00000477429 IKBKBO14920 756 aa10.13□□□□□ -0.79
COL4A5-204ENST00000477429 LATO43561 262 aa10.13□□□□□ -0.79
COL4A5-204ENST00000477429 SLC28A2O43868 658 aa10.13□□□□□ -0.79
COL4A5-204ENST00000477429 DFNA5O60443 496 aa10.13□□□□□ -0.79
COL4A5-204ENST00000477429 CUTAO60888 179 aa10.13□□□□□ -0.79
COL4A5-204ENST00000477429 PPP6R2O75170 966 aa10.13□□□□□ -0.79
COL4A5-204ENST00000477429 RTN2O75298 545 aa10.13□□□□□ -0.79
COL4A5-204ENST00000477429 FYNP06241 537 aa10.13□□□□□ -0.79
COL4A5-204ENST00000477429 CKMT2P17540 419 aa10.13□□□□□ -0.79
COL4A5-204ENST00000477429 POLR2EP19388 210 aaKnown RBP10.13□□□□□ -0.79
COL4A5-204ENST00000477429 ACP1P24666 158 aa10.13□□□□□ -0.79
COL4A5-204ENST00000477429 MAT2AP31153 395 aaKnown RBP10.13□□□□□ -0.79
COL4A5-204ENST00000477429 RXRGP48443 463 aa10.13□□□□□ -0.79
COL4A5-204ENST00000477429 CCR5P51681 352 aa10.13□□□□□ -0.79
COL4A5-204ENST00000477429 AMPD3Q01432 767 aa10.13□□□□□ -0.79
COL4A5-204ENST00000477429 INAVAQ3KP66 663 aa10.13□□□□□ -0.79
COL4A5-204ENST00000477429 TTC31Q49AM3 519 aaPredicted RBP10.13□□□□□ -0.79
COL4A5-204ENST00000477429 CDCP2Q5VXM1 449 aa10.13□□□□□ -0.79
COL4A5-204ENST00000477429 ANKRD52Q8NB46 1076 aa10.13□□□□□ -0.79
COL4A5-204ENST00000477429 BAP1Q92560 729 aa10.13□□□□□ -0.79
COL4A5-204ENST00000477429 PTPRN2Q92932 1015 aa10.13□□□□□ -0.79
COL4A5-204ENST00000477429 PAGE5Q96GU1 130 aa10.13□□□□□ -0.79
COL4A5-204ENST00000477429 RPL10LQ96L21 214 aaKnown RBP10.13□□□□□ -0.79
COL4A5-204ENST00000477429 CDK5RAP1Q96SZ6 601 aaKnown RBP10.13□□□□□ -0.79
COL4A5-204ENST00000477429 TRIM4Q9C037 500 aa10.13□□□□□ -0.79
COL4A5-204ENST00000477429 NUCKS1Q9H1E3 243 aaKnown RBP10.13□□□□□ -0.79
COL4A5-204ENST00000477429 GDF3Q9NR23 364 aa10.13□□□□□ -0.79
COL4A5-204ENST00000477429 SUN2Q9UH99 717 aa10.13□□□□□ -0.79
COL4A5-204ENST00000477429 PCDHA7Q9UN72 937 aa10.13□□□□□ -0.79
COL4A5-204ENST00000477429 CLCA2Q9UQC9 943 aa10.13□□□□□ -0.79
COL4A5-204ENST00000477429 ERVW-1Q9UQF0 538 aa10.13□□□□□ -0.79
COL4A5-204ENST00000477429 HBS1LQ9Y450 684 aaKnown RBP10.13□□□□□ -0.79
COL4A5-204ENST00000477429 BOD1L1Q8NFC6 3051 aa10.12□□□□□ -0.79
COL4A5-204ENST00000477429 ERVH48-1M5A8F1 160 aa10.12□□□□□ -0.79
COL4A5-204ENST00000477429 PDXKO00764 312 aa10.12□□□□□ -0.79
COL4A5-204ENST00000477429 ACSL4O60488 711 aa10.12□□□□□ -0.79
COL4A5-204ENST00000477429 HARS2P49590 506 aaKnown RBP10.12□□□□□ -0.79
COL4A5-204ENST00000477429 FOXK1P85037 733 aa10.12□□□□□ -0.79
COL4A5-204ENST00000477429 POM121L1PQ3SYA9 428 aa10.12□□□□□ -0.79
COL4A5-204ENST00000477429 PKDCCQ504Y2 493 aa10.12□□□□□ -0.79
COL4A5-204ENST00000477429 TAF1BQ53T94 588 aaPredicted RBP10.12□□□□□ -0.79
COL4A5-204ENST00000477429 PITRM1Q5JRX3 1037 aa10.12□□□□□ -0.79
COL4A5-204ENST00000477429 KIAA1614Q5VZ46 1190 aa10.12□□□□□ -0.79
COL4A5-204ENST00000477429 RESP18Q5W5W9 173 aa10.12□□□□□ -0.79
COL4A5-204ENST00000477429 MFN1Q8IWA4 741 aa10.12□□□□□ -0.79
COL4A5-204ENST00000477429 ARHGAP18Q8N392 663 aa10.12□□□□□ -0.79
COL4A5-204ENST00000477429 ENGASEQ8NFI3 743 aa10.12□□□□□ -0.79
COL4A5-204ENST00000477429 OR14C36Q8NHC7 312 aa10.12□□□□□ -0.79
COL4A5-204ENST00000477429 FIBINQ8TAL6 211 aa10.12□□□□□ -0.79
COL4A5-204ENST00000477429 TFAP2BQ92481 460 aa10.12□□□□□ -0.79
COL4A5-204ENST00000477429 GOLGA1Q92805 767 aa10.12□□□□□ -0.79
COL4A5-204ENST00000477429 FAM131CQ96AQ9 280 aa10.12□□□□□ -0.79
COL4A5-204ENST00000477429 FCRL2Q96LA5 508 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms