RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 PLXNB3Q9ULL4 1909 aa12.07□□□□□ -0.48
VARS2-208ENST00000477052 FREM2Q5SZK8 3169 aa12.06□□□□□ -0.48
VARS2-208ENST00000477052 DSPP15924 2871 aaKnown RBP12.06□□□□□ -0.48
VARS2-208ENST00000477052 FAM149AA5PLN7 773 aa12.06□□□□□ -0.48
VARS2-208ENST00000477052 TMEM8BA6NDV4 472 aa12.06□□□□□ -0.48
VARS2-208ENST00000477052 CBX4O00257 560 aa12.06□□□□□ -0.48
VARS2-208ENST00000477052 RNASEH2AO75792 299 aaKnown RBP12.06□□□□□ -0.48
VARS2-208ENST00000477052 LUC7L3O95232 432 aaKnown RBP12.06□□□□□ -0.48
VARS2-208ENST00000477052 TRUB2O95900 331 aaKnown RBP12.06□□□□□ -0.48
VARS2-208ENST00000477052 WNT1P04628 370 aa12.06□□□□□ -0.48
VARS2-208ENST00000477052 CAPNS1P04632 268 aa12.06□□□□□ -0.48
VARS2-208ENST00000477052 PDGFRAP16234 1089 aa12.06□□□□□ -0.48
VARS2-208ENST00000477052 CD27P26842 260 aa12.06□□□□□ -0.48
VARS2-208ENST00000477052 MZF1P28698 734 aaPredicted RBP12.06□□□□□ -0.48
VARS2-208ENST00000477052 GNA15P30679 374 aa12.06□□□□□ -0.48
VARS2-208ENST00000477052 CLDN6P56747 220 aa12.06□□□□□ -0.48
VARS2-208ENST00000477052 CENPCQ03188 943 aa12.06□□□□□ -0.48
VARS2-208ENST00000477052 HNRNPDQ14103 355 aaKnown RBP12.06□□□□□ -0.48
VARS2-208ENST00000477052 POM121L1PQ3SYA9 428 aa12.06□□□□□ -0.48
VARS2-208ENST00000477052 TTC31Q49AM3 519 aaPredicted RBP12.06□□□□□ -0.48
VARS2-208ENST00000477052 KIAA0895LQ68EN5 471 aa12.06□□□□□ -0.48
VARS2-208ENST00000477052 IL27RAQ6UWB1 636 aa12.06□□□□□ -0.48
VARS2-208ENST00000477052 ADAT2Q7Z6V5 191 aaKnown RBP12.06□□□□□ -0.48
VARS2-208ENST00000477052 GATAD2AQ86YP4 633 aa12.06□□□□□ -0.48
VARS2-208ENST00000477052 WDTC1Q8N5D0 677 aa12.06□□□□□ -0.48
VARS2-208ENST00000477052 AADATQ8N5Z0 425 aa12.06□□□□□ -0.48
VARS2-208ENST00000477052 BAHD1Q8TBE0 780 aaPredicted RBP12.06□□□□□ -0.48
VARS2-208ENST00000477052 MDM1Q8TC05 714 aa12.06□□□□□ -0.48
VARS2-208ENST00000477052 AZIN2Q96A70 460 aa12.06□□□□□ -0.48
VARS2-208ENST00000477052 CPXM1Q96SM3 734 aa12.06□□□□□ -0.48
VARS2-208ENST00000477052 OMDQ99983 421 aa12.06□□□□□ -0.48
VARS2-208ENST00000477052 DDX50Q9BQ39 737 aaKnown RBP12.06□□□□□ -0.48
VARS2-208ENST00000477052 PLCB1Q9NQ66 1216 aa12.06□□□□□ -0.48
VARS2-208ENST00000477052 APOBEC2Q9Y235 224 aaKnown RBP12.06□□□□□ -0.48
VARS2-208ENST00000477052 CABIN1Q9Y6J0 2220 aa12.05□□□□□ -0.48
VARS2-208ENST00000477052 FAM208BQ5VWN6 2430 aa12.05□□□□□ -0.48
VARS2-208ENST00000477052 TYW5A2RUC4 315 aaKnown RBP12.05□□□□□ -0.48
VARS2-208ENST00000477052 FAM221BA6H8Z2 402 aa12.05□□□□□ -0.48
VARS2-208ENST00000477052 GNA14O95837 355 aa12.05□□□□□ -0.48
VARS2-208ENST00000477052 APOEP02649 317 aa12.05□□□□□ -0.48
VARS2-208ENST00000477052 SLC8A1P32418 973 aa12.05□□□□□ -0.48
VARS2-208ENST00000477052 PPP1R2P41236 205 aa12.05□□□□□ -0.48
VARS2-208ENST00000477052 ACADSBP45954 432 aa12.05□□□□□ -0.48
VARS2-208ENST00000477052 MARSP56192 900 aaKnown RBP12.05□□□□□ -0.48
VARS2-208ENST00000477052 YWHAZP63104 245 aaKnown RBP12.05□□□□□ -0.48
VARS2-208ENST00000477052 ECT2LQ008S8 904 aa12.05□□□□□ -0.48
VARS2-208ENST00000477052 ZBTB16Q05516 673 aa12.05□□□□□ -0.48
VARS2-208ENST00000477052 PDCLQ13371 301 aa12.05□□□□□ -0.48
VARS2-208ENST00000477052 KCNJ12Q14500 433 aa12.05□□□□□ -0.48
VARS2-208ENST00000477052 TEAD4Q15561 434 aa12.05□□□□□ -0.48
VARS2-208ENST00000477052 TRIM65Q6PJ69 517 aa12.05□□□□□ -0.48
VARS2-208ENST00000477052 CCNI2Q6ZMN8 369 aaPredicted RBP12.05□□□□□ -0.48
VARS2-208ENST00000477052 TMEM110Q86TL2 294 aa12.05□□□□□ -0.48
VARS2-208ENST00000477052 CCDC117Q8IWD4 279 aaPredicted RBP12.05□□□□□ -0.48
VARS2-208ENST00000477052 ELOA2Q8IYF1 753 aaPredicted RBP12.05□□□□□ -0.48
VARS2-208ENST00000477052 DEFB106AQ8N104 65 aa12.05□□□□□ -0.48
VARS2-208ENST00000477052 OR52K2Q8NGK3 314 aa12.05□□□□□ -0.48
VARS2-208ENST00000477052 RNF34Q969K3 372 aa12.05□□□□□ -0.48
VARS2-208ENST00000477052 IGSF8Q969P0 613 aa12.05□□□□□ -0.48
VARS2-208ENST00000477052 PCED1AQ9H1Q7 454 aa12.05□□□□□ -0.48
VARS2-208ENST00000477052 FAM204AQ9H8W3 233 aa12.05□□□□□ -0.48
VARS2-208ENST00000477052 POPDC2Q9HBU9 364 aa12.05□□□□□ -0.48
VARS2-208ENST00000477052 SGK2Q9HBY8 427 aa12.05□□□□□ -0.48
VARS2-208ENST00000477052 DDIT4Q9NX09 232 aa12.05□□□□□ -0.48
VARS2-208ENST00000477052 KIAA1522Q9P206 1035 aaPredicted RBP12.05□□□□□ -0.48
VARS2-208ENST00000477052 LHX6Q9UPM6 363 aa12.05□□□□□ -0.48
VARS2-208ENST00000477052 NCKAP1Q9Y2A7 1128 aa12.05□□□□□ -0.48
VARS2-208ENST00000477052 SNX10Q9Y5X0 201 aa12.05□□□□□ -0.48
VARS2-208ENST00000477052 PTPRBP23467 1997 aa12.05□□□□□ -0.48
VARS2-208ENST00000477052 EDDM13A0A1B0GTR0 161 aa12.04□□□□□ -0.48
VARS2-208ENST00000477052 KCNU1A8MYU2 1149 aa12.04□□□□□ -0.48
VARS2-208ENST00000477052 F5H5T6 163 aa12.04□□□□□ -0.48
VARS2-208ENST00000477052 SART1O43290 800 aaKnown RBP12.04□□□□□ -0.48
VARS2-208ENST00000477052 MED7O43513 233 aa12.04□□□□□ -0.48
VARS2-208ENST00000477052 RNASEH1O60930 286 aaKnown RBP12.04□□□□□ -0.48
VARS2-208ENST00000477052 IL1BP01584 269 aa12.04□□□□□ -0.48
VARS2-208ENST00000477052 IGLV3-25P01717 112 aa12.04□□□□□ -0.48
VARS2-208ENST00000477052 ASLP04424 464 aa12.04□□□□□ -0.48
VARS2-208ENST00000477052 ERBB2P04626 1255 aa12.04□□□□□ -0.48
VARS2-208ENST00000477052 ZNF883P0CG24 379 aa12.04□□□□□ -0.48
VARS2-208ENST00000477052 CTSKP43235 329 aa12.04□□□□□ -0.48
VARS2-208ENST00000477052 GRIA4P48058 902 aa12.04□□□□□ -0.48
VARS2-208ENST00000477052 PPP2CBP62714 309 aa12.04□□□□□ -0.48
VARS2-208ENST00000477052 PPP2CAP67775 309 aa12.04□□□□□ -0.48
VARS2-208ENST00000477052 NME3Q13232 169 aa12.04□□□□□ -0.48
VARS2-208ENST00000477052 NNTQ13423 1086 aa12.04□□□□□ -0.48
VARS2-208ENST00000477052 HSP90AA4PQ58FG1 418 aa12.04□□□□□ -0.48
VARS2-208ENST00000477052 RNF219Q5W0B1 726 aaPredicted RBP12.04□□□□□ -0.48
VARS2-208ENST00000477052 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.04□□□□□ -0.48
VARS2-208ENST00000477052 DBX2Q6ZNG2 339 aa12.04□□□□□ -0.48
VARS2-208ENST00000477052 FAM183BPQ6ZVS7 135 aa12.04□□□□□ -0.48
VARS2-208ENST00000477052 C14orf80Q86SX3 495 aa12.04□□□□□ -0.48
VARS2-208ENST00000477052 GLRX5Q86SX6 157 aa12.04□□□□□ -0.48
VARS2-208ENST00000477052 IRF2BP1Q8IU81 584 aa12.04□□□□□ -0.48
VARS2-208ENST00000477052 CCAR2Q8N163 923 aaKnown RBP12.04□□□□□ -0.48
VARS2-208ENST00000477052 C1orf131Q8NDD1 294 aaKnown RBP12.04□□□□□ -0.48
VARS2-208ENST00000477052 OR14C36Q8NHC7 312 aa12.04□□□□□ -0.48
VARS2-208ENST00000477052 STK32AQ8WU08 396 aa12.04□□□□□ -0.48
VARS2-208ENST00000477052 PTPRN2Q92932 1015 aa12.04□□□□□ -0.48
VARS2-208ENST00000477052 BTN2A3PQ96KV6 586 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms