RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 CCDC114Q96M63 670 aa10.54□□□□□ -0.72
CCM2-208ENST00000476594 NPY6RQ99463 290 aa10.54□□□□□ -0.72
CCM2-208ENST00000476594 SELENOOQ9BVL4 669 aa10.54□□□□□ -0.72
CCM2-208ENST00000476594 TKTL2Q9H0I9 626 aa10.54□□□□□ -0.72
CCM2-208ENST00000476594 TMEM245Q9H330 911 aa10.54□□□□□ -0.72
CCM2-208ENST00000476594 TMEM9BQ9NQ34 198 aa10.54□□□□□ -0.72
CCM2-208ENST00000476594 ITM2CQ9NQX7 267 aa10.54□□□□□ -0.72
CCM2-208ENST00000476594 USP36Q9P275 1121 aaKnown RBP10.54□□□□□ -0.72
CCM2-208ENST00000476594 VANGL2Q9ULK5 521 aa10.54□□□□□ -0.72
CCM2-208ENST00000476594 EDDM13A0A1B0GTR0 161 aa10.53□□□□□ -0.72
CCM2-208ENST00000476594 A0A1W2PQC6 194 aa10.53□□□□□ -0.72
CCM2-208ENST00000476594 TARSL2A2RTX5 802 aaKnown RBP10.53□□□□□ -0.72
CCM2-208ENST00000476594 PAGE1O75459 146 aa10.53□□□□□ -0.72
CCM2-208ENST00000476594 CFIP05156 583 aa10.53□□□□□ -0.72
CCM2-208ENST00000476594 TPM3P06753 285 aa10.53□□□□□ -0.72
CCM2-208ENST00000476594 SYPP08247 313 aa10.53□□□□□ -0.72
CCM2-208ENST00000476594 MMP8P22894 467 aa10.53□□□□□ -0.72
CCM2-208ENST00000476594 ATXN1P54253 815 aaKnown RBP10.53□□□□□ -0.72
CCM2-208ENST00000476594 PITX1P78337 314 aaPredicted RBP10.53□□□□□ -0.72
CCM2-208ENST00000476594 FMO1Q01740 532 aa10.53□□□□□ -0.72
CCM2-208ENST00000476594 CENPCQ03188 943 aa10.53□□□□□ -0.72
CCM2-208ENST00000476594 GFPT1Q06210 699 aaPredicted RBP10.53□□□□□ -0.72
CCM2-208ENST00000476594 AUHQ13825 339 aaKnown RBP10.53□□□□□ -0.72
CCM2-208ENST00000476594 CCDC6Q16204 474 aa10.53□□□□□ -0.72
CCM2-208ENST00000476594 TRIM61Q5EBN2 209 aa10.53□□□□□ -0.72
CCM2-208ENST00000476594 C6orf118Q5T5N4 469 aa10.53□□□□□ -0.72
CCM2-208ENST00000476594 FBXL22Q6P050 247 aa10.53□□□□□ -0.72
CCM2-208ENST00000476594 MMS22LQ6ZRQ5 1243 aa10.53□□□□□ -0.72
CCM2-208ENST00000476594 WFDC5Q8TCV5 224 aa10.53□□□□□ -0.72
CCM2-208ENST00000476594 NT5C3BQ969T7 300 aa10.53□□□□□ -0.72
CCM2-208ENST00000476594 IQCDQ96DY2 449 aa10.53□□□□□ -0.72
CCM2-208ENST00000476594 P2RY11Q96G91 374 aa10.53□□□□□ -0.72
CCM2-208ENST00000476594 TOE1Q96GM8 510 aaKnown RBP10.53□□□□□ -0.72
CCM2-208ENST00000476594 C1orf74Q96LT6 269 aa10.53□□□□□ -0.72
CCM2-208ENST00000476594 HSPA12BQ96MM6 686 aa10.53□□□□□ -0.72
CCM2-208ENST00000476594 TBCBQ99426 244 aa10.53□□□□□ -0.72
CCM2-208ENST00000476594 PRMT1Q99873 361 aaKnown RBP10.53□□□□□ -0.72
CCM2-208ENST00000476594 C11orf70Q9BRQ4 267 aa10.53□□□□□ -0.72
CCM2-208ENST00000476594 MKRN2Q9H000 416 aaKnown RBP10.53□□□□□ -0.72
CCM2-208ENST00000476594 BTBD1Q9H0C5 482 aa10.53□□□□□ -0.72
CCM2-208ENST00000476594 SIK2Q9H0K1 926 aa10.53□□□□□ -0.72
CCM2-208ENST00000476594 RETREG1Q9H6L5 497 aa10.53□□□□□ -0.72
CCM2-208ENST00000476594 CD248Q9HCU0 757 aa10.53□□□□□ -0.72
CCM2-208ENST00000476594 RTN4Q9NQC3 1192 aaKnown RBP10.53□□□□□ -0.72
CCM2-208ENST00000476594 METTL5Q9NRN9 209 aaKnown RBP10.53□□□□□ -0.72
CCM2-208ENST00000476594 ARHGEF38Q9NXL2 777 aa10.53□□□□□ -0.72
CCM2-208ENST00000476594 WSB2Q9NYS7 404 aaPredicted RBP10.53□□□□□ -0.72
CCM2-208ENST00000476594 ADAM22Q9P0K1 906 aa10.53□□□□□ -0.72
CCM2-208ENST00000476594 XPO7Q9UIA9 1087 aaKnown RBP10.53□□□□□ -0.72
CCM2-208ENST00000476594 MBD1Q9UIS9 605 aaPredicted RBP10.53□□□□□ -0.72
CCM2-208ENST00000476594 VPS28Q9UK41 221 aa10.53□□□□□ -0.72
CCM2-208ENST00000476594 TPX2Q9ULW0 747 aaKnown RBP10.53□□□□□ -0.72
CCM2-208ENST00000476594 SLC6A14Q9UN76 642 aa10.53□□□□□ -0.72
CCM2-208ENST00000476594 ERVW-1Q9UQF0 538 aa10.53□□□□□ -0.72
CCM2-208ENST00000476594 FARP1Q9Y4F1 1045 aaPredicted RBP10.53□□□□□ -0.72
CCM2-208ENST00000476594 HS3ST4Q9Y661 456 aa10.53□□□□□ -0.72
CCM2-208ENST00000476594 DMXL1Q9Y485 3027 aa10.52□□□□□ -0.73
CCM2-208ENST00000476594 EPHB6O15197 1021 aa10.52□□□□□ -0.73
CCM2-208ENST00000476594 IGLV3-19P01714 112 aa10.52□□□□□ -0.73
CCM2-208ENST00000476594 RHOCP08134 193 aa10.52□□□□□ -0.73
CCM2-208ENST00000476594 KRT3P12035 628 aa10.52□□□□□ -0.73
CCM2-208ENST00000476594 ATP1A3P13637 1013 aa10.52□□□□□ -0.73
CCM2-208ENST00000476594 HLA-EP13747 358 aa10.52□□□□□ -0.73
CCM2-208ENST00000476594 PDGFRAP16234 1089 aa10.52□□□□□ -0.73
CCM2-208ENST00000476594 TNFAIP3P21580 790 aa10.52□□□□□ -0.73
CCM2-208ENST00000476594 FLT3P36888 993 aa10.52□□□□□ -0.73
CCM2-208ENST00000476594 ETFBP38117 255 aa10.52□□□□□ -0.73
CCM2-208ENST00000476594 PTGER3P43115 390 aa10.52□□□□□ -0.73
CCM2-208ENST00000476594 TPMTP51580 245 aa10.52□□□□□ -0.73
CCM2-208ENST00000476594 PLK1P53350 603 aa10.52□□□□□ -0.73
CCM2-208ENST00000476594 COPAP53621 1224 aa10.52□□□□□ -0.73
CCM2-208ENST00000476594 GSCP56915 257 aaPredicted RBP10.52□□□□□ -0.73
CCM2-208ENST00000476594 ARID5BQ14865 1188 aa10.52□□□□□ -0.73
CCM2-208ENST00000476594 PTPRNQ16849 979 aa10.52□□□□□ -0.73
CCM2-208ENST00000476594 CLEC16AQ2KHT3 1053 aa10.52□□□□□ -0.73
CCM2-208ENST00000476594 HNRNPA1L2Q32P51 320 aaKnown RBP10.52□□□□□ -0.73
CCM2-208ENST00000476594 STPG1Q5TH74 334 aa10.52□□□□□ -0.73
CCM2-208ENST00000476594 PEAR1Q5VY43 1037 aaPredicted RBP10.52□□□□□ -0.73
CCM2-208ENST00000476594 SLC23A3Q6PIS1 610 aa10.52□□□□□ -0.73
CCM2-208ENST00000476594 STRADAQ7RTN6 431 aa10.52□□□□□ -0.73
CCM2-208ENST00000476594 SETD3Q86TU7 594 aaPredicted RBP10.52□□□□□ -0.73
CCM2-208ENST00000476594 CACUL1Q86Y37 369 aa10.52□□□□□ -0.73
CCM2-208ENST00000476594 PHF13Q86YI8 300 aaPredicted RBP10.52□□□□□ -0.73
CCM2-208ENST00000476594 DHX40Q8IX18 779 aaKnown RBP10.52□□□□□ -0.73
CCM2-208ENST00000476594 HDDC3Q8N4P3 179 aa10.52□□□□□ -0.73
CCM2-208ENST00000476594 C3orf20Q8ND61 904 aa10.52□□□□□ -0.73
CCM2-208ENST00000476594 GANCQ8TET4 914 aa10.52□□□□□ -0.73
CCM2-208ENST00000476594 SLC20A1Q8WUM9 679 aa10.52□□□□□ -0.73
CCM2-208ENST00000476594 ERLEC1Q96DZ1 483 aa10.52□□□□□ -0.73
CCM2-208ENST00000476594 ZNF419Q96HQ0 510 aaPredicted RBP10.52□□□□□ -0.73
CCM2-208ENST00000476594 CFAP57Q96MR6 1250 aa10.52□□□□□ -0.73
CCM2-208ENST00000476594 HAPLN3Q96S86 360 aa10.52□□□□□ -0.73
CCM2-208ENST00000476594 AGPAT1Q99943 283 aa10.52□□□□□ -0.73
CCM2-208ENST00000476594 C2orf49Q9BVC5 232 aaPredicted RBP10.52□□□□□ -0.73
CCM2-208ENST00000476594 GPR174Q9BXC1 333 aa10.52□□□□□ -0.73
CCM2-208ENST00000476594 EDEM3Q9BZQ6 932 aa10.52□□□□□ -0.73
CCM2-208ENST00000476594 MUC3BQ9H195 1237 aa10.52□□□□□ -0.73
CCM2-208ENST00000476594 SGK2Q9HBY8 427 aa10.52□□□□□ -0.73
CCM2-208ENST00000476594 PRSS16Q9NQE7 514 aa10.52□□□□□ -0.73
CCM2-208ENST00000476594 PIGVQ9NUD9 493 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms