RNA–Protein interactions for RNA: ENST00000476558.7

CCDC7-206, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 1,819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-206ENST00000476558 PKN2Q16513 984 aaKnown RBP23.64■■□□□ 1.38
CCDC7-206ENST00000476558 TEX44Q53QW1 395 aa23.64■■□□□ 1.38
CCDC7-206ENST00000476558 ZNF276Q8N554 614 aa23.64■■□□□ 1.38
CCDC7-206ENST00000476558 DEPDC1BQ8WUY9 529 aa23.64■■□□□ 1.38
CCDC7-206ENST00000476558 CELF6Q96J87 481 aaKnown RBP23.64■■□□□ 1.38
CCDC7-206ENST00000476558 UBE2OQ9C0C9 1292 aaKnown RBP23.64■■□□□ 1.38
CCDC7-206ENST00000476558 PPANQ9NQ55 473 aaKnown RBP23.64■■□□□ 1.38
CCDC7-206ENST00000476558 INTS9Q9NV88 658 aaKnown RBP23.64■■□□□ 1.38
CCDC7-206ENST00000476558 TTLL3Q9Y4R7 772 aa23.64■■□□□ 1.38
CCDC7-206ENST00000476558 TRIM43BA6NCK2 446 aa23.63■■□□□ 1.37
CCDC7-206ENST00000476558 GMNCA6NCL1 334 aa23.63■■□□□ 1.37
CCDC7-206ENST00000476558 TRDMT1O14717 391 aaKnown RBP23.63■■□□□ 1.37
CCDC7-206ENST00000476558 SOD2P04179 222 aa23.63■■□□□ 1.37
CCDC7-206ENST00000476558 CD68P34810 354 aaPredicted RBP23.63■■□□□ 1.37
CCDC7-206ENST00000476558 TUBP50607 506 aa23.63■■□□□ 1.37
CCDC7-206ENST00000476558 COG7P83436 770 aa23.63■■□□□ 1.37
CCDC7-206ENST00000476558 ZBTB17Q13105 803 aa23.63■■□□□ 1.37
CCDC7-206ENST00000476558 FOXR1Q6PIV2 292 aa23.63■■□□□ 1.37
CCDC7-206ENST00000476558 NLRP14Q86W24 1093 aa23.63■■□□□ 1.37
CCDC7-206ENST00000476558 SLC39A11Q8N1S5 342 aa23.63■■□□□ 1.37
CCDC7-206ENST00000476558 MPP5Q8N3R9 675 aa23.63■■□□□ 1.37
CCDC7-206ENST00000476558 MZB1Q8WU39 189 aa23.63■■□□□ 1.37
CCDC7-206ENST00000476558 TRIM43Q96BQ3 446 aaPredicted RBP23.63■■□□□ 1.37
CCDC7-206ENST00000476558 SHROOM3Q8TF72 1996 aa23.63■■□□□ 1.37
CCDC7-206ENST00000476558 KIAA0355O15063 1070 aa23.63■■□□□ 1.37
CCDC7-206ENST00000476558 ZBTB24O43167 697 aaPredicted RBP23.63■■□□□ 1.37
CCDC7-206ENST00000476558 ABLIM3O94929 683 aa23.63■■□□□ 1.37
CCDC7-206ENST00000476558 MOCS2O96007 188 aaPredicted RBP23.63■■□□□ 1.37
CCDC7-206ENST00000476558 CCNCP24863 283 aa23.63■■□□□ 1.37
CCDC7-206ENST00000476558 DEFB103AP81534 67 aa23.63■■□□□ 1.37
CCDC7-206ENST00000476558 KBTBD12Q3ZCT8 623 aa23.63■■□□□ 1.37
CCDC7-206ENST00000476558 GIPC2Q8TF65 315 aa23.63■■□□□ 1.37
CCDC7-206ENST00000476558 TEKT5Q96M29 485 aa23.63■■□□□ 1.37
CCDC7-206ENST00000476558 CCT8L2Q96SF2 557 aa23.63■■□□□ 1.37
CCDC7-206ENST00000476558 RABEP2Q9H5N1 569 aa23.63■■□□□ 1.37
CCDC7-206ENST00000476558 MARCH2Q9P0N8 246 aa23.63■■□□□ 1.37
CCDC7-206ENST00000476558 SENP1Q9P0U3 644 aa23.63■■□□□ 1.37
CCDC7-206ENST00000476558 FNIP2Q9P278 1114 aa23.63■■□□□ 1.37
CCDC7-206ENST00000476558 KLHL8Q9P2G9 620 aaPredicted RBP23.63■■□□□ 1.37
CCDC7-206ENST00000476558 HSFX1Q9UBD0 423 aa23.63■■□□□ 1.37
CCDC7-206ENST00000476558 DOCK4Q8N1I0 1966 aa23.62■■□□□ 1.37
CCDC7-206ENST00000476558 PIAS1O75925 651 aa23.62■■□□□ 1.37
CCDC7-206ENST00000476558 SUN1O94901 812 aa23.62■■□□□ 1.37
CCDC7-206ENST00000476558 FAM107AO95990 144 aa23.62■■□□□ 1.37
CCDC7-206ENST00000476558 CSF2RAP15509 400 aa23.62■■□□□ 1.37
CCDC7-206ENST00000476558 PRKCHP24723 683 aa23.62■■□□□ 1.37
CCDC7-206ENST00000476558 STX2P32856 288 aa23.62■■□□□ 1.37
CCDC7-206ENST00000476558 TUFMP49411 452 aaKnown RBP23.62■■□□□ 1.37
CCDC7-206ENST00000476558 DSG1Q02413 1049 aa23.62■■□□□ 1.37
CCDC7-206ENST00000476558 KCTD11Q693B1 232 aa23.62■■□□□ 1.37
CCDC7-206ENST00000476558 UNC5AQ6ZN44 842 aa23.62■■□□□ 1.37
CCDC7-206ENST00000476558 TMCO2Q7Z6W1 182 aaPredicted RBP23.62■■□□□ 1.37
CCDC7-206ENST00000476558 PRPF39Q86UA1 669 aaKnown RBP23.62■■□□□ 1.37
CCDC7-206ENST00000476558 RTL3Q8N8U3 475 aaKnown RBP23.62■■□□□ 1.37
CCDC7-206ENST00000476558 SLC44A1Q8WWI5 657 aa23.62■■□□□ 1.37
CCDC7-206ENST00000476558 CFAP36Q96G28 342 aa23.62■■□□□ 1.37
CCDC7-206ENST00000476558 GBA3Q9H227 469 aa23.62■■□□□ 1.37
CCDC7-206ENST00000476558 PRDM5Q9NQX1 630 aaPredicted RBP23.62■■□□□ 1.37
CCDC7-206ENST00000476558 NDFIP2Q9NV92 336 aa23.62■■□□□ 1.37
CCDC7-206ENST00000476558 AFF4Q9UHB7 1163 aaKnown RBP23.62■■□□□ 1.37
CCDC7-206ENST00000476558 F5H423 210 aaPredicted RBP23.61■■□□□ 1.37
CCDC7-206ENST00000476558 SLC18A1P54219 525 aa23.61■■□□□ 1.37
CCDC7-206ENST00000476558 RING1Q06587 406 aa23.61■■□□□ 1.37
CCDC7-206ENST00000476558 MS4A13Q5J8X5 152 aa23.61■■□□□ 1.37
CCDC7-206ENST00000476558 C10orf120Q5SQS8 335 aa23.61■■□□□ 1.37
CCDC7-206ENST00000476558 CYS1Q717R9 158 aa23.61■■□□□ 1.37
CCDC7-206ENST00000476558 KLHDC8BQ8IXV7 354 aa23.61■■□□□ 1.37
CCDC7-206ENST00000476558 BTN2A3PQ96KV6 586 aa23.61■■□□□ 1.37
CCDC7-206ENST00000476558 ZNF558Q96NG5 402 aa23.61■■□□□ 1.37
CCDC7-206ENST00000476558 ZNF317Q96PQ6 595 aaPredicted RBP23.61■■□□□ 1.37
CCDC7-206ENST00000476558 SLC39A8Q9C0K1 460 aa23.61■■□□□ 1.37
CCDC7-206ENST00000476558 PPARGC1AQ9UBK2 798 aaKnown RBP23.61■■□□□ 1.37
CCDC7-206ENST00000476558 IGLV3-10A0A075B6K4 115 aa23.61■■□□□ 1.37
CCDC7-206ENST00000476558 CACNG3O60359 315 aa23.61■■□□□ 1.37
CCDC7-206ENST00000476558 MAFKO60675 156 aa23.61■■□□□ 1.37
CCDC7-206ENST00000476558 SEC24AO95486 1093 aa23.61■■□□□ 1.37
CCDC7-206ENST00000476558 CPP00450 1065 aa23.61■■□□□ 1.37
CCDC7-206ENST00000476558 APOEP02649 317 aa23.61■■□□□ 1.37
CCDC7-206ENST00000476558 MSH2P43246 934 aa23.61■■□□□ 1.37
CCDC7-206ENST00000476558 HNRNPH2P55795 449 aaKnown RBP23.61■■□□□ 1.37
CCDC7-206ENST00000476558 WDR5P61964 334 aaKnown RBP23.61■■□□□ 1.37
CCDC7-206ENST00000476558 SNX30Q5VWJ9 437 aa23.61■■□□□ 1.37
CCDC7-206ENST00000476558 STEAP4Q687X5 459 aa23.61■■□□□ 1.37
CCDC7-206ENST00000476558 KIAA1841Q6NSI8 718 aa23.61■■□□□ 1.37
CCDC7-206ENST00000476558 CMTR2Q8IYT2 770 aaKnown RBP23.61■■□□□ 1.37
CCDC7-206ENST00000476558 ZNF461Q8TAF7 563 aa23.61■■□□□ 1.37
CCDC7-206ENST00000476558 MRRFQ96E11 262 aaKnown RBP23.61■■□□□ 1.37
CCDC7-206ENST00000476558 TRABDQ9H4I3 376 aa23.61■■□□□ 1.37
CCDC7-206ENST00000476558 SDR42E2A6NKP2 422 aa23.6■■□□□ 1.37
CCDC7-206ENST00000476558 AP2A1O95782 977 aa23.6■■□□□ 1.37
CCDC7-206ENST00000476558 ARHGAP36Q6ZRI8 547 aa23.6■■□□□ 1.37
CCDC7-206ENST00000476558 CNTD1Q8N815 330 aa23.6■■□□□ 1.37
CCDC7-206ENST00000476558 ATP6V0D2Q8N8Y2 350 aa23.6■■□□□ 1.37
CCDC7-206ENST00000476558 ARNTL2Q8WYA1 636 aa23.6■■□□□ 1.37
CCDC7-206ENST00000476558 HERC2P3Q9BVR0 1158 aa23.6■■□□□ 1.37
CCDC7-206ENST00000476558 CCSER2Q9H7U1 834 aa23.6■■□□□ 1.37
CCDC7-206ENST00000476558 MPP6Q9NZW5 540 aa23.6■■□□□ 1.37
CCDC7-206ENST00000476558 PCDHA11Q9Y5I1 949 aa23.6■■□□□ 1.37
CCDC7-206ENST00000476558 NYNRINQ9P2P1 1898 aaKnown RBP23.6■■□□□ 1.37
CCDC7-206ENST00000476558 A0A1W2PPM1 405 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms