RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 PRICKLE1Q96MT3 831 aaPredicted RBP17.06■□□□□ 0.32
APOBEC3F-203ENST00000476513 ZNF396Q96N95 335 aaPredicted RBP17.06■□□□□ 0.32
APOBEC3F-203ENST00000476513 IPO9Q96P70 1041 aaKnown RBP17.06■□□□□ 0.32
APOBEC3F-203ENST00000476513 ABCC13Q9NSE7 274 aa17.06■□□□□ 0.32
APOBEC3F-203ENST00000476513 ERVW-1Q9UQF0 538 aa17.06■□□□□ 0.32
APOBEC3F-203ENST00000476513 TRAF3IP3Q9Y228 551 aa17.06■□□□□ 0.32
APOBEC3F-203ENST00000476513 EDDM13A0A1B0GTR0 161 aa17.05■□□□□ 0.32
APOBEC3F-203ENST00000476513 B8ZZF3 427 aa17.05■□□□□ 0.32
APOBEC3F-203ENST00000476513 CALUO43852 315 aaPredicted RBP17.05■□□□□ 0.32
APOBEC3F-203ENST00000476513 ACSL4O60488 711 aa17.05■□□□□ 0.32
APOBEC3F-203ENST00000476513 ADH1BP00325 375 aa17.05■□□□□ 0.32
APOBEC3F-203ENST00000476513 MPOP05164 745 aa17.05■□□□□ 0.32
APOBEC3F-203ENST00000476513 C5AR1P21730 350 aa17.05■□□□□ 0.32
APOBEC3F-203ENST00000476513 UCNP55089 124 aa17.05■□□□□ 0.32
APOBEC3F-203ENST00000476513 LY6DQ14210 128 aa17.05■□□□□ 0.32
APOBEC3F-203ENST00000476513 NADSYN1Q6IA69 706 aa17.05■□□□□ 0.32
APOBEC3F-203ENST00000476513 MSANTD2Q6P1R3 559 aa17.05■□□□□ 0.32
APOBEC3F-203ENST00000476513 MMS22LQ6ZRQ5 1243 aa17.05■□□□□ 0.32
APOBEC3F-203ENST00000476513 IQCHQ86VS3 1027 aa17.05■□□□□ 0.32
APOBEC3F-203ENST00000476513 STK40Q8N2I9 435 aa17.05■□□□□ 0.32
APOBEC3F-203ENST00000476513 HJURPQ8NCD3 748 aaPredicted RBP17.05■□□□□ 0.32
APOBEC3F-203ENST00000476513 FAXDC2Q96IV6 333 aa17.05■□□□□ 0.32
APOBEC3F-203ENST00000476513 TMEM8AQ9HCN3 771 aa17.05■□□□□ 0.32
APOBEC3F-203ENST00000476513 ARHGAP20Q9P2F6 1191 aa17.05■□□□□ 0.32
APOBEC3F-203ENST00000476513 SERTAD1Q9UHV2 236 aa17.05■□□□□ 0.32
APOBEC3F-203ENST00000476513 SLCO3A1Q9UIG8 710 aa17.05■□□□□ 0.32
APOBEC3F-203ENST00000476513 TSPAN16Q9UKR8 245 aa17.05■□□□□ 0.32
APOBEC3F-203ENST00000476513 ITIH6Q6UXX5 1313 aa17.04■□□□□ 0.32
APOBEC3F-203ENST00000476513 TBC1D3DA0A087WVF3 549 aa17.04■□□□□ 0.32
APOBEC3F-203ENST00000476513 TBC1D3IA0A087WXS9 549 aa17.04■□□□□ 0.32
APOBEC3F-203ENST00000476513 TBC1D3EA0A087X179 549 aa17.04■□□□□ 0.32
APOBEC3F-203ENST00000476513 TBC1D3KA0A087X1G2 549 aa17.04■□□□□ 0.32
APOBEC3F-203ENST00000476513 TBC1D3FA6NER0 549 aaPredicted RBP17.04■□□□□ 0.32
APOBEC3F-203ENST00000476513 TBC1D3LB9A6J9 549 aa17.04■□□□□ 0.32
APOBEC3F-203ENST00000476513 SRPRAP08240 638 aaKnown RBP17.04■□□□□ 0.32
APOBEC3F-203ENST00000476513 TBC1D3HP0C7X1 549 aa17.04■□□□□ 0.32
APOBEC3F-203ENST00000476513 KRT13P13646 458 aa17.04■□□□□ 0.32
APOBEC3F-203ENST00000476513 C6P13671 934 aa17.04■□□□□ 0.32
APOBEC3F-203ENST00000476513 RPS24P62847 133 aaKnown RBP17.04■□□□□ 0.32
APOBEC3F-203ENST00000476513 BST2Q10589 180 aaKnown RBP17.04■□□□□ 0.32
APOBEC3F-203ENST00000476513 ZNF211Q13398 564 aaPredicted RBP17.04■□□□□ 0.32
APOBEC3F-203ENST00000476513 FSCBQ5H9T9 825 aa17.04■□□□□ 0.32
APOBEC3F-203ENST00000476513 PITRM1Q5JRX3 1037 aa17.04■□□□□ 0.32
APOBEC3F-203ENST00000476513 RESP18Q5W5W9 173 aa17.04■□□□□ 0.32
APOBEC3F-203ENST00000476513 NUGGCQ68CJ6 796 aa17.04■□□□□ 0.32
APOBEC3F-203ENST00000476513 TBC1D3GQ6DHY5 549 aa17.04■□□□□ 0.32
APOBEC3F-203ENST00000476513 TBC1D3CQ6IPX1 549 aa17.04■□□□□ 0.32
APOBEC3F-203ENST00000476513 UNC45BQ8IWX7 931 aa17.04■□□□□ 0.32
APOBEC3F-203ENST00000476513 FAM186BQ8IYM0 893 aa17.04■□□□□ 0.32
APOBEC3F-203ENST00000476513 CEP57L1Q8IYX8 460 aa17.04■□□□□ 0.32
APOBEC3F-203ENST00000476513 TBC1D3Q8IZP1 549 aaPredicted RBP17.04■□□□□ 0.32
APOBEC3F-203ENST00000476513 SIX6OS1Q8N1H7 587 aa17.04■□□□□ 0.32
APOBEC3F-203ENST00000476513 SLC25A45Q8N413 288 aa17.04■□□□□ 0.32
APOBEC3F-203ENST00000476513 CARNMT1Q8N4J0 409 aa17.04■□□□□ 0.32
APOBEC3F-203ENST00000476513 TTC9Q92623 222 aa17.04■□□□□ 0.32
APOBEC3F-203ENST00000476513 FAM13BQ9NYF5 915 aa17.04■□□□□ 0.32
APOBEC3F-203ENST00000476513 ARHGAP6O43182 974 aa17.03■□□□□ 0.32
APOBEC3F-203ENST00000476513 DXOO77932 396 aaKnown RBP17.03■□□□□ 0.32
APOBEC3F-203ENST00000476513 NR2F2P24468 414 aa17.03■□□□□ 0.32
APOBEC3F-203ENST00000476513 MZF1P28698 734 aaPredicted RBP17.03■□□□□ 0.32
APOBEC3F-203ENST00000476513 DRD3P35462 400 aa17.03■□□□□ 0.32
APOBEC3F-203ENST00000476513 DAOAP59103 153 aa17.03■□□□□ 0.32
APOBEC3F-203ENST00000476513 ENPEPQ07075 957 aa17.03■□□□□ 0.32
APOBEC3F-203ENST00000476513 OVGP1Q12889 678 aa17.03■□□□□ 0.32
APOBEC3F-203ENST00000476513 CDH18Q13634 790 aa17.03■□□□□ 0.32
APOBEC3F-203ENST00000476513 CDCP2Q5VXM1 449 aa17.03■□□□□ 0.32
APOBEC3F-203ENST00000476513 KRT39Q6A163 491 aa17.03■□□□□ 0.32
APOBEC3F-203ENST00000476513 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.03■□□□□ 0.32
APOBEC3F-203ENST00000476513 PRPF39Q86UA1 669 aaKnown RBP17.03■□□□□ 0.32
APOBEC3F-203ENST00000476513 SCML4Q8N228 414 aa17.03■□□□□ 0.32
APOBEC3F-203ENST00000476513 UBA3Q8TBC4 463 aa17.03■□□□□ 0.32
APOBEC3F-203ENST00000476513 PTPRN2Q92932 1015 aa17.03■□□□□ 0.32
APOBEC3F-203ENST00000476513 AZIN2Q96A70 460 aa17.03■□□□□ 0.32
APOBEC3F-203ENST00000476513 PAGE5Q96GU1 130 aa17.03■□□□□ 0.32
APOBEC3F-203ENST00000476513 FOXD4L1Q9NU39 408 aa17.03■□□□□ 0.32
APOBEC3F-203ENST00000476513 HESX1Q9UBX0 185 aa17.03■□□□□ 0.32
APOBEC3F-203ENST00000476513 CYTH4Q9UIA0 394 aa17.03■□□□□ 0.32
APOBEC3F-203ENST00000476513 ACTN4O43707 911 aaKnown RBP17.02■□□□□ 0.32
APOBEC3F-203ENST00000476513 MAGEC1O60732 1142 aa17.02■□□□□ 0.32
APOBEC3F-203ENST00000476513 RTN2O75298 545 aa17.02■□□□□ 0.32
APOBEC3F-203ENST00000476513 IL1BP01584 269 aa17.02■□□□□ 0.32
APOBEC3F-203ENST00000476513 MAT2AP31153 395 aaKnown RBP17.02■□□□□ 0.32
APOBEC3F-203ENST00000476513 GTF2H1P32780 548 aa17.02■□□□□ 0.32
APOBEC3F-203ENST00000476513 METAP1P53582 386 aa17.02■□□□□ 0.32
APOBEC3F-203ENST00000476513 TBX4P57082 545 aa17.02■□□□□ 0.32
APOBEC3F-203ENST00000476513 GABREP78334 506 aa17.02■□□□□ 0.32
APOBEC3F-203ENST00000476513 DAB2P98082 770 aa17.02■□□□□ 0.32
APOBEC3F-203ENST00000476513 ECT2LQ008S8 904 aa17.02■□□□□ 0.32
APOBEC3F-203ENST00000476513 KCNC4Q03721 635 aa17.02■□□□□ 0.32
APOBEC3F-203ENST00000476513 NFIL3Q16649 462 aa17.02■□□□□ 0.32
APOBEC3F-203ENST00000476513 SGO2Q562F6 1265 aa17.02■□□□□ 0.32
APOBEC3F-203ENST00000476513 LSMEM2Q8N112 164 aa17.02■□□□□ 0.32
APOBEC3F-203ENST00000476513 SNRNP27Q8WVK2 155 aaKnown RBP17.02■□□□□ 0.32
APOBEC3F-203ENST00000476513 KCNE4Q8WWG9 221 aa17.02■□□□□ 0.32
APOBEC3F-203ENST00000476513 KCTD13Q8WZ19 329 aa17.02■□□□□ 0.32
APOBEC3F-203ENST00000476513 FAM131CQ96AQ9 280 aa17.02■□□□□ 0.32
APOBEC3F-203ENST00000476513 INTS4Q96HW7 963 aaKnown RBP17.02■□□□□ 0.32
APOBEC3F-203ENST00000476513 RPL10LQ96L21 214 aaKnown RBP17.02■□□□□ 0.32
APOBEC3F-203ENST00000476513 CNGB3Q9NQW8 809 aa17.02■□□□□ 0.32
APOBEC3F-203ENST00000476513 RAB20Q9NX57 234 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms