RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 RNASE9P60153 205 aaKnown RBP16.75■□□□□ 0.27
COL1A1-205ENST00000476387 TPM4P67936 248 aa16.75■□□□□ 0.27
COL1A1-205ENST00000476387 NOMO3P69849 1222 aa16.75■□□□□ 0.27
COL1A1-205ENST00000476387 PITX1P78337 314 aaPredicted RBP16.75■□□□□ 0.27
COL1A1-205ENST00000476387 PLEKHG6Q3KR16 790 aa16.75■□□□□ 0.27
COL1A1-205ENST00000476387 FAM102AQ5T9C2 384 aaPredicted RBP16.75■□□□□ 0.27
COL1A1-205ENST00000476387 TRIM72Q6ZMU5 477 aa16.75■□□□□ 0.27
COL1A1-205ENST00000476387 MFN1Q8IWA4 741 aa16.75■□□□□ 0.27
COL1A1-205ENST00000476387 MINDY1Q8N5J2 469 aa16.75■□□□□ 0.27
COL1A1-205ENST00000476387 SLC20A1Q8WUM9 679 aa16.75■□□□□ 0.27
COL1A1-205ENST00000476387 NUP58Q9BVL2 599 aa16.75■□□□□ 0.27
COL1A1-205ENST00000476387 ZDHHC5Q9C0B5 715 aa16.75■□□□□ 0.27
COL1A1-205ENST00000476387 NUCKS1Q9H1E3 243 aaKnown RBP16.75■□□□□ 0.27
COL1A1-205ENST00000476387 FSCN3Q9NQT6 498 aa16.75■□□□□ 0.27
COL1A1-205ENST00000476387 STIM2Q9P246 746 aa16.75■□□□□ 0.27
COL1A1-205ENST00000476387 NOCTQ9UK39 431 aaKnown RBP16.75■□□□□ 0.27
COL1A1-205ENST00000476387 STAP1Q9ULZ2 295 aa16.75■□□□□ 0.27
COL1A1-205ENST00000476387 MEI4A8MW99 385 aa16.74■□□□□ 0.27
COL1A1-205ENST00000476387 F5H5T6 163 aa16.74■□□□□ 0.27
COL1A1-205ENST00000476387 MATKP42679 507 aa16.74■□□□□ 0.27
COL1A1-205ENST00000476387 GABRB2P47870 512 aa16.74■□□□□ 0.27
COL1A1-205ENST00000476387 ZBTB16Q05516 673 aa16.74■□□□□ 0.27
COL1A1-205ENST00000476387 NME3Q13232 169 aa16.74■□□□□ 0.27
COL1A1-205ENST00000476387 MTA1Q13330 715 aa16.74■□□□□ 0.27
COL1A1-205ENST00000476387 SLC14A1Q13336 389 aa16.74■□□□□ 0.27
COL1A1-205ENST00000476387 CDH18Q13634 790 aa16.74■□□□□ 0.27
COL1A1-205ENST00000476387 PTPRNQ16849 979 aa16.74■□□□□ 0.27
COL1A1-205ENST00000476387 MS4A13Q5J8X5 152 aa16.74■□□□□ 0.27
COL1A1-205ENST00000476387 RAP1GAP2Q684P5 730 aa16.74■□□□□ 0.27
COL1A1-205ENST00000476387 MBLAC2Q68D91 279 aa16.74■□□□□ 0.27
COL1A1-205ENST00000476387 XYLT1Q86Y38 959 aa16.74■□□□□ 0.27
COL1A1-205ENST00000476387 LGI2Q8N0V4 545 aa16.74■□□□□ 0.27
COL1A1-205ENST00000476387 FIBINQ8TAL6 211 aa16.74■□□□□ 0.27
COL1A1-205ENST00000476387 CYB5D2Q8WUJ1 264 aa16.74■□□□□ 0.27
COL1A1-205ENST00000476387 CPA5Q8WXQ8 436 aa16.74■□□□□ 0.27
COL1A1-205ENST00000476387 PRICKLE1Q96MT3 831 aaPredicted RBP16.74■□□□□ 0.27
COL1A1-205ENST00000476387 FUCA2Q9BTY2 467 aa16.74■□□□□ 0.27
COL1A1-205ENST00000476387 GPR174Q9BXC1 333 aa16.74■□□□□ 0.27
COL1A1-205ENST00000476387 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.74■□□□□ 0.27
COL1A1-205ENST00000476387 WASF3Q9UPY6 502 aa16.74■□□□□ 0.27
COL1A1-205ENST00000476387 NYNRINQ9P2P1 1898 aaKnown RBP16.73■□□□□ 0.27
COL1A1-205ENST00000476387 A0A1B0GTW7 788 aa16.73■□□□□ 0.27
COL1A1-205ENST00000476387 METTL12A8MUP2 240 aa16.73■□□□□ 0.27
COL1A1-205ENST00000476387 KCNU1A8MYU2 1149 aa16.73■□□□□ 0.27
COL1A1-205ENST00000476387 GOLGA8SH3BPF8 625 aa16.73■□□□□ 0.27
COL1A1-205ENST00000476387 M0QYT0 321 aa16.73■□□□□ 0.27
COL1A1-205ENST00000476387 HLA-EP13747 358 aa16.73■□□□□ 0.27
COL1A1-205ENST00000476387 POLR2EP19388 210 aaKnown RBP16.73■□□□□ 0.27
COL1A1-205ENST00000476387 TACR2P21452 398 aa16.73■□□□□ 0.27
COL1A1-205ENST00000476387 SULT1E1P49888 294 aa16.73■□□□□ 0.27
COL1A1-205ENST00000476387 RPS24P62847 133 aaKnown RBP16.73■□□□□ 0.27
COL1A1-205ENST00000476387 FMO1Q01740 532 aa16.73■□□□□ 0.27
COL1A1-205ENST00000476387 HNRNPDQ14103 355 aaKnown RBP16.73■□□□□ 0.27
COL1A1-205ENST00000476387 SND1Q7KZF4 910 aaKnown RBP eCLIP16.73■□□□□ 0.27
COL1A1-205ENST00000476387 CARNMT1Q8N4J0 409 aa16.73■□□□□ 0.27
COL1A1-205ENST00000476387 WFDC5Q8TCV5 224 aa16.73■□□□□ 0.27
COL1A1-205ENST00000476387 TTC17Q96AE7 1141 aa16.73■□□□□ 0.27
COL1A1-205ENST00000476387 LMLNQ96KR4 655 aa16.73■□□□□ 0.27
COL1A1-205ENST00000476387 XPO7Q9UIA9 1087 aaKnown RBP16.73■□□□□ 0.27
COL1A1-205ENST00000476387 ADAMTS9Q9P2N4 1935 aa16.72■□□□□ 0.27
COL1A1-205ENST00000476387 FRYQ5TBA9 3013 aa16.72■□□□□ 0.27
COL1A1-205ENST00000476387 CCDC172P0C7W6 258 aa16.72■□□□□ 0.27
COL1A1-205ENST00000476387 CD70P32970 193 aa16.72■□□□□ 0.27
COL1A1-205ENST00000476387 FOXC1Q12948 553 aa16.72■□□□□ 0.27
COL1A1-205ENST00000476387 EIF4EBP2Q13542 120 aaPredicted RBP16.72■□□□□ 0.27
COL1A1-205ENST00000476387 C2CD6Q53TS8 623 aa16.72■□□□□ 0.27
COL1A1-205ENST00000476387 RABGAP1LQ5R372 815 aa16.72■□□□□ 0.27
COL1A1-205ENST00000476387 DCAF12L1Q5VU92 463 aa16.72■□□□□ 0.27
COL1A1-205ENST00000476387 CFAP52Q8N1V2 620 aa16.72■□□□□ 0.27
COL1A1-205ENST00000476387 RTN4Q9NQC3 1192 aaKnown RBP16.72■□□□□ 0.27
COL1A1-205ENST00000476387 PRSS16Q9NQE7 514 aa16.72■□□□□ 0.27
COL1A1-205ENST00000476387 SEPT11Q9NVA2 429 aaKnown RBP16.72■□□□□ 0.27
COL1A1-205ENST00000476387 SUN2Q9UH99 717 aa16.72■□□□□ 0.27
COL1A1-205ENST00000476387 PAXBP1Q9Y5B6 917 aa16.72■□□□□ 0.27
COL1A1-205ENST00000476387 H0Y626 953 aa16.71■□□□□ 0.27
COL1A1-205ENST00000476387 TEX33O43247 280 aa16.71■□□□□ 0.27
COL1A1-205ENST00000476387 GJB3O75712 270 aa16.71■□□□□ 0.27
COL1A1-205ENST00000476387 LUC7L3O95232 432 aaKnown RBP16.71■□□□□ 0.27
COL1A1-205ENST00000476387 SERPINC1P01008 464 aa16.71■□□□□ 0.27
COL1A1-205ENST00000476387 ASLP04424 464 aa16.71■□□□□ 0.27
COL1A1-205ENST00000476387 CYP1A1P04798 512 aaPredicted RBP16.71■□□□□ 0.27
COL1A1-205ENST00000476387 CD59P13987 128 aa16.71■□□□□ 0.27
COL1A1-205ENST00000476387 CHRNB2P17787 502 aa16.71■□□□□ 0.27
COL1A1-205ENST00000476387 MAOBP27338 520 aa16.71■□□□□ 0.27
COL1A1-205ENST00000476387 NSFP46459 744 aaKnown RBP16.71■□□□□ 0.27
COL1A1-205ENST00000476387 GRIK2Q13002 908 aa16.71■□□□□ 0.27
COL1A1-205ENST00000476387 IQCB1Q15051 598 aa16.71■□□□□ 0.27
COL1A1-205ENST00000476387 SKOR2Q2VWA4 1001 aaPredicted RBP16.71■□□□□ 0.27
COL1A1-205ENST00000476387 TTC39BQ5VTQ0 682 aaPredicted RBP16.71■□□□□ 0.27
COL1A1-205ENST00000476387 MMS22LQ6ZRQ5 1243 aa16.71■□□□□ 0.27
COL1A1-205ENST00000476387 KDM1BQ8NB78 822 aa16.71■□□□□ 0.27
COL1A1-205ENST00000476387 MYEOVQ96EZ4 313 aa16.71■□□□□ 0.27
COL1A1-205ENST00000476387 NPY6RQ99463 290 aa16.71■□□□□ 0.27
COL1A1-205ENST00000476387 C11orf70Q9BRQ4 267 aa16.71■□□□□ 0.27
COL1A1-205ENST00000476387 TMEM51Q9NW97 253 aa16.71■□□□□ 0.27
COL1A1-205ENST00000476387 DOCK4Q8N1I0 1966 aa16.7■□□□□ 0.26
COL1A1-205ENST00000476387 BCAT2O15382 392 aaPredicted RBP16.7■□□□□ 0.26
COL1A1-205ENST00000476387 MOCS3O95396 460 aa16.7■□□□□ 0.26
COL1A1-205ENST00000476387 F9P00740 461 aa16.7■□□□□ 0.26
COL1A1-205ENST00000476387 FERP16591 822 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms